Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11565

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
2,554,490	+		AO353_11555	0.71	-1.4
2,554,491	-		AO353_11555	0.71	-0.0
2,554,608	+				-0.4
2,554,608	+				+2.4
2,554,608	+		AO353_11555	0.83	-0.7
2,554,608	+		AO353_11555	0.83	+0.2
2,554,608	+		AO353_11555	0.83	-0.4
2,554,608	+		AO353_11555	0.83	-0.4
2,554,609	-		AO353_11555	0.83	-0.7
2,554,609	-		AO353_11555	0.83	-0.8
2,554,609	-		AO353_11555	0.83	+1.2
2,554,609	-		AO353_11555	0.83	+1.1
2,554,609	-		AO353_11555	0.83	+0.1
2,554,689	+				+0.3
2,554,689	+				-2.6
2,554,689	+				-0.1
2,554,689	+				+0.9
2,554,689	+				+1.7
2,554,690	-				+0.5
2,554,690	-				+0.1
2,554,690	-				+1.0
2,554,690	-				+1.6
2,554,690	-				-0.9
2,554,690	-				-0.3
2,554,778	+				-0.1
2,554,778	+				+0.1
2,554,779	-				-2.2
2,554,806	+				+2.7
2,554,806	+				+0.3
2,554,806	+				+1.1
2,554,807	-				-0.2
2,554,807	-				+1.1
2,554,807	-				-1.9
2,554,807	-				-0.9
2,554,807	-				+0.6
2,554,807	-				+1.7
2,554,814	+				-0.5
2,554,814	+				-0.8
2,554,814	+				-2.2
2,554,814	+				-0.6
2,554,814	+				+2.0
2,554,814	+				+1.4
2,554,814	+				+0.8
2,554,814	+				-0.6
2,554,814	+				-0.1
2,554,814	+				+2.3
2,554,814	+				-0.6
2,554,814	+				-2.6
2,554,814	+				-1.6
2,554,814	+				-0.9
2,554,815	-				-2.7
2,554,815	-				+0.8
2,554,815	-				+0.1
2,554,815	-				+0.8
2,554,815	-				+0.9
2,554,815	-				+0.3
2,554,815	-				-0.8
2,554,815	-				-0.8
2,554,815	-				-0.9
2,554,815	-				-0.4
2,554,815	-				-0.8
2,554,815	-				+0.5
2,554,815	-				+0.3
2,554,815	-				+0.1
2,554,815	-				+0.6
2,554,815	-				+0.5
2,554,815	-				-0.8
2,554,815	-				-0.9
2,554,815	-				+0.7
2,554,815	-				-0.3
2,554,815	-				+0.5
2,554,845	+				-2.3
2,554,845	+				+0.4
2,554,845	+				-0.6
2,554,846	-				+0.9
2,554,846	-				-0.9
2,554,846	-				-0.6
2,554,846	-				+0.8
2,554,846	-				-1.6
2,554,875	+				+0.4
2,554,875	+				+0.0
2,554,876	-				-0.1
2,554,885	+				+0.1
2,554,885	+				-0.4
2,554,885	+				-0.3
2,554,885	+				+0.5
2,554,885	+				+0.1
2,554,885	+				-0.3
2,554,885	+				+1.7
2,554,885	+				-0.8
2,554,885	+				+0.8
2,554,885	+				-1.2
2,554,886	-				-0.1
2,554,886	-				-0.3
2,554,886	-				-0.5
2,554,886	-				+0.5
2,554,886	-				-2.0
2,554,886	-				+0.9
2,554,886	-				+0.5
2,554,886	-				+0.1
2,554,886	-				+0.6
2,555,043	+		AO353_11560	0.32	-0.7
2,555,116	+		AO353_11560	0.46	-0.8
2,555,116	+		AO353_11560	0.46	+3.2
2,555,116	+		AO353_11560	0.46	+0.8
2,555,116	+		AO353_11560	0.46	+0.3
2,555,116	+		AO353_11560	0.46	+0.3
2,555,117	-				+2.4
2,555,117	-		AO353_11560	0.46	-0.4
2,555,117	-		AO353_11560	0.46	+1.8
2,555,117	-		AO353_11560	0.46	-0.0
2,555,117	-		AO353_11560	0.46	+2.1
2,555,117	-		AO353_11560	0.46	-1.5
2,555,117	-		AO353_11560	0.46	-0.6
2,555,189	+		AO353_11560	0.60	-0.3
2,555,189	+		AO353_11560	0.60	+1.2
2,555,189	+		AO353_11560	0.60	+0.2
2,555,189	+		AO353_11560	0.60	+1.0
2,555,190	-		AO353_11560	0.60	-0.9
2,555,205	+		AO353_11560	0.63	-1.4
2,555,206	-		AO353_11560	0.63	+0.2
2,555,206	-		AO353_11560	0.63	+0.5
2,555,206	-		AO353_11560	0.63	-0.5
2,555,206	-		AO353_11560	0.63	+0.7
2,555,206	-		AO353_11560	0.63	-1.1
2,555,206	-		AO353_11560	0.63	+1.2
2,555,206	-		AO353_11560	0.63	-0.6
2,555,231	+		AO353_11560	0.68	+0.1
2,555,231	+		AO353_11560	0.68	+1.0
2,555,232	-		AO353_11560	0.68	-1.7
2,555,367	+				+0.3
2,555,402	+				-0.7
2,555,403	-				-1.4
2,555,413	+				-0.5
2,555,413	+				+1.6
2,555,413	+				-0.9
2,555,414	-				+2.1
2,555,489	+				+0.4
2,555,558	+		AO353_11565	0.11	+1.2
2,555,558	+		AO353_11565	0.11	-1.3
2,555,558	+		AO353_11565	0.11	-1.3
2,555,558	+		AO353_11565	0.11	+0.6
2,555,559	-		AO353_11565	0.11	+0.6
2,555,640	+		AO353_11565	0.23	+0.5
2,555,662	+		AO353_11565	0.26	+0.1
2,555,704	+		AO353_11565	0.32	-0.0
2,555,704	+		AO353_11565	0.32	+0.1
2,555,704	+		AO353_11565	0.32	-0.0
2,555,705	-		AO353_11565	0.32	-0.3
2,555,705	-		AO353_11565	0.32	+0.9
2,555,705	-		AO353_11565	0.32	-1.7
2,555,778	+		AO353_11565	0.43	-0.7
2,555,779	-		AO353_11565	0.43	-0.3
2,555,779	-		AO353_11565	0.43	+0.8
2,555,809	+		AO353_11565	0.47	-0.6
2,555,809	+		AO353_11565	0.47	-0.6
2,555,810	-		AO353_11565	0.47	-1.8
2,555,810	-		AO353_11565	0.47	-0.8
2,555,810	-		AO353_11565	0.47	-0.0
2,555,853	+		AO353_11565	0.54	-2.2
2,555,853	+		AO353_11565	0.54	-0.9
2,555,854	-		AO353_11565	0.54	+2.0
2,555,854	-		AO353_11565	0.54	+0.6
2,555,854	-		AO353_11565	0.54	+0.4
2,555,885	+		AO353_11565	0.58	+0.5
2,555,885	+		AO353_11565	0.58	-1.7
2,555,885	+		AO353_11565	0.58	+0.5
2,555,885	+		AO353_11565	0.58	+1.5
2,555,885	+		AO353_11565	0.58	+0.6
2,555,885	+		AO353_11565	0.58	+1.5
2,555,886	-		AO353_11565	0.59	+1.1
2,555,886	-		AO353_11565	0.59	+0.4
2,555,886	-		AO353_11565	0.59	-0.6
2,555,886	-		AO353_11565	0.59	+0.3
2,555,886	-		AO353_11565	0.59	-0.2
2,555,979	+		AO353_11565	0.72	+1.1
2,556,114	+				-1.1
2,556,115	-				+0.1
2,556,115	-				-0.0
2,556,115	-				+1.6
2,556,124	+				+0.3
2,556,124	+				-0.9
2,556,124	+				+0.2
2,556,124	+				-0.8
2,556,124	+				+0.4
2,556,124	+				-0.1
2,556,125	-				+0.5
2,556,125	-				-0.1
2,556,125	-				+1.4
2,556,125	-				+0.4
2,556,191	+				-1.4
2,556,191	+				-2.2
2,556,191	+				+0.8
2,556,191	+				+0.7
2,556,192	-				-0.4
2,556,244	+				+0.2
2,556,244	+				+0.2
2,556,244	+				-0.6
2,556,245	-				+0.4
2,556,245	-				-0.1
2,556,331	+		AO353_11570	0.20	+1.0
2,556,331	+		AO353_11570	0.20	+1.9
2,556,331	+		AO353_11570	0.20	+0.8
2,556,331	+		AO353_11570	0.20	+0.5
2,556,332	-		AO353_11570	0.20	-1.9
2,556,332	-		AO353_11570	0.20	-0.7
2,556,332	-		AO353_11570	0.20	-3.5
2,556,332	-		AO353_11570	0.20	+0.6
2,556,344	+		AO353_11570	0.23	+1.4
2,556,344	+		AO353_11570	0.23	+0.1
2,556,345	-		AO353_11570	0.23	-1.3
2,556,345	-		AO353_11570	0.23	-0.0
2,556,345	-		AO353_11570	0.23	-0.9
2,556,345	-		AO353_11570	0.23	-0.4
2,556,345	-		AO353_11570	0.23	-0.1
2,556,391	+		AO353_11570	0.36	-0.8
2,556,391	+		AO353_11570	0.36	+1.7
2,556,391	+		AO353_11570	0.36	+0.3
2,556,391	+		AO353_11570	0.36	-1.8
2,556,391	+		AO353_11570	0.36	+0.3
2,556,391	+		AO353_11570	0.36	+0.0
2,556,391	+		AO353_11570	0.36	+1.6
2,556,391	+		AO353_11570	0.36	-0.2
2,556,391	+		AO353_11570	0.36	-1.1
2,556,392	-		AO353_11570	0.36	+1.0
2,556,392	-		AO353_11570	0.36	+0.4
2,556,392	-		AO353_11570	0.36	+1.0
2,556,392	-		AO353_11570	0.36	+1.7
2,556,392	-		AO353_11570	0.36	+1.4
2,556,547	+		AO353_11570	0.79	+2.4
2,556,547	+		AO353_11570	0.79	+0.8
2,556,548	-		AO353_11570	0.79	-1.7
2,556,548	-		AO353_11570	0.79	-0.4
2,556,548	-		AO353_11570	0.79	-0.3
2,556,548	-		AO353_11570	0.79	-0.8
2,556,548	-		AO353_11570	0.79	-0.6
2,556,548	-		AO353_11570	0.79	-0.2
2,556,548	-		AO353_11570	0.79	-1.5
2,556,548	-		AO353_11570	0.79	+1.2
2,556,866	+				-0.7
2,556,866	+				-1.6
2,556,866	+				-0.8
2,556,866	+				+0.1
2,556,866	+				-0.0
2,556,866	+				+0.8
2,556,866	+				-1.5
2,556,866	+				-0.3
2,556,866	+				-0.9
2,556,867	-				-0.4
2,556,867	-				-0.1
2,556,867	-				+1.1
2,556,867	-				-0.3
2,556,867	-				-1.7
2,556,867	-				+0.8
2,556,867	-				-0.4
2,556,867	-				-0.3
2,556,945	+		AO353_11575	0.17	+1.3
2,556,946	-		AO353_11575	0.17	+2.0
2,557,018	-		AO353_11575	0.24	-0.6
2,557,018	-		AO353_11575	0.24	+1.0
2,557,121	-		AO353_11575	0.35	-0.6