Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11485

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
2,537,516	+		AO353_11475	0.75	+0.3
2,537,517	-		AO353_11475	0.76	+0.1
2,537,628	+				+1.0
2,537,628	+				+2.7
2,537,628	+				-0.5
2,537,628	+				-0.4
2,537,628	+				+0.5
2,537,629	-				+1.9
2,537,629	-				-0.4
2,537,629	-				-0.4
2,537,629	-				-1.5
2,537,639	+				+0.6
2,537,639	+				+1.2
2,537,639	+				+2.4
2,537,640	-				+0.4
2,537,655	+				+0.8
2,537,677	+				-0.3
2,537,677	+				+0.7
2,537,677	+				-0.3
2,537,678	-				+0.2
2,537,678	-				+0.5
2,537,678	-				+1.4
2,537,678	-				+0.1
2,537,731	+				+0.3
2,537,731	+				+0.6
2,537,731	+				+1.2
2,537,731	+				+0.8
2,537,732	-				+0.8
2,537,732	-				-0.3
2,537,732	-				+0.2
2,537,732	-				-0.9
2,537,736	+				-0.3
2,537,736	+				-1.9
2,537,736	+				-1.4
2,537,736	+				-1.4
2,537,737	-				-1.4
2,537,737	-				-0.8
2,537,737	-				-0.4
2,537,737	-				-0.6
2,537,742	+				+1.6
2,537,742	+				-0.7
2,537,742	+				-0.1
2,537,742	+				+0.7
2,537,742	+				+1.0
2,537,742	+				-1.1
2,537,742	+				-1.1
2,537,742	+				+0.1
2,537,742	+				+0.0
2,537,742	+				+0.4
2,537,742	+				+1.1
2,537,742	+				+0.8
2,537,742	+				+1.2
2,537,742	+				-0.3
2,537,743	-				+1.2
2,537,743	-				-1.5
2,537,743	-				-1.3
2,537,743	-				+0.5
2,537,743	-				-0.9
2,537,743	-				+0.3
2,537,743	-				-0.2
2,537,743	-				-0.9
2,537,743	-				+0.2
2,537,743	-				+0.7
2,537,743	-				+0.8
2,537,743	-				-0.8
2,537,760	-				-1.6
2,537,760	-				+1.4
2,537,760	-				+0.4
2,537,760	-				+0.9
2,537,760	-				+2.4
2,537,760	-				-0.4
2,537,760	-				-0.1
2,537,763	+				+0.6
2,537,763	+				-0.6
2,537,763	+				+0.4
2,537,942	+				+1.8
2,537,942	+				-1.1
2,537,942	+				-1.4
2,537,994	+				-0.8
2,537,994	+				+0.7
2,537,994	+				-1.3
2,537,994	+				+0.1
2,537,994	+				+0.5
2,537,995	-				+0.6
2,537,995	-				+1.3
2,537,995	-				+1.0
2,538,055	+				+1.3
2,538,072	+				-1.8
2,538,072	+				+0.1
2,538,072	+				-1.9
2,538,072	+				+1.3
2,538,073	-				-2.1
2,538,073	-				+0.8
2,538,073	-				-0.6
2,538,073	-				+1.3
2,538,073	-				-1.6
2,538,078	+				-0.1
2,538,078	+				-0.2
2,538,079	-				+1.2
2,538,079	-				+1.7
2,538,192	+		AO353_11480	0.24	+1.5
2,538,304	+		AO353_11480	0.60	+0.8
2,538,305	-		AO353_11480	0.61	-0.3
2,538,348	+		AO353_11480	0.75	+0.4
2,538,348	+		AO353_11480	0.75	-0.8
2,538,348	+		AO353_11480	0.75	-2.7
2,538,348	+		AO353_11480	0.75	+1.0
2,538,348	+		AO353_11480	0.75	-0.6
2,538,348	+		AO353_11480	0.75	+0.9
2,538,348	+		AO353_11480	0.75	+0.5
2,538,348	+		AO353_11480	0.75	-0.1
2,538,348	+		AO353_11480	0.75	+1.0
2,538,348	+		AO353_11480	0.75	+2.3
2,538,348	+		AO353_11480	0.75	-1.2
2,538,348	+		AO353_11480	0.75	-2.9
2,538,348	+		AO353_11480	0.75	-0.2
2,538,349	-		AO353_11480	0.75	-1.9
2,538,349	-		AO353_11480	0.75	+1.2
2,538,349	-		AO353_11480	0.75	+1.0
2,538,349	-		AO353_11480	0.75	-0.2
2,538,349	-		AO353_11480	0.75	+0.8
2,538,349	-		AO353_11480	0.75	-1.4
2,538,349	-		AO353_11480	0.75	-0.7
2,538,349	-		AO353_11480	0.75	-0.7
2,538,349	-		AO353_11480	0.75	-0.6
2,538,349	-		AO353_11480	0.75	-0.6
2,538,349	-		AO353_11480	0.75	-2.1
2,538,349	-		AO353_11480	0.75	-1.2
2,538,349	-		AO353_11480	0.75	-0.4
2,538,349	-		AO353_11480	0.75	+0.8
2,538,349	-		AO353_11480	0.75	+0.9
2,538,349	-		AO353_11480	0.75	+0.6
2,538,349	-		AO353_11480	0.75	-0.6
2,538,349	-		AO353_11480	0.75	-0.4
2,538,360	-		AO353_11480	0.79	+0.4
2,538,493	+		AO353_11485	0.28	-0.6
2,538,493	+		AO353_11485	0.28	-0.8
2,538,494	-		AO353_11485	0.29	-1.4
2,538,494	-		AO353_11485	0.29	-0.3
2,538,494	-		AO353_11485	0.29	-0.4
2,538,494	-		AO353_11485	0.29	-1.8
2,538,523	-		AO353_11485	0.40	-1.1
2,538,529	+		AO353_11485	0.42	+0.1
2,538,529	+		AO353_11485	0.42	-0.6
2,538,530	-		AO353_11485	0.43	-1.9
2,538,530	-		AO353_11485	0.43	-0.8
2,538,530	-		AO353_11485	0.43	-1.2
2,538,572	+		AO353_11485	0.59	-1.0
2,538,573	-		AO353_11485	0.60	+0.2
2,538,573	-		AO353_11485	0.60	-2.4
2,538,598	-		AO353_11485	0.69	+0.4
2,538,652	+				+0.8
2,538,652	+				-0.2
2,538,653	-				-0.2
2,538,653	-				+1.9
2,538,653	-				+0.4
2,538,653	-				+0.9
2,538,658	+				-1.5
2,538,658	+				+1.3
2,538,658	+				+1.7
2,538,658	+				-1.1
2,538,658	+				+0.5
2,538,658	+				+1.8
2,538,658	+				+0.8
2,538,658	+				+0.0
2,538,658	+				-0.3
2,538,658	+				+0.1
2,538,659	-				+0.7
2,538,659	-				-0.2
2,538,659	-				-0.6
2,538,768	+				-1.3
2,538,768	+				+0.2
2,538,768	+				+1.4
2,538,768	+				-0.4
2,538,768	+				-2.2
2,538,768	+				+0.8
2,538,768	+				-0.6
2,538,768	+				-0.2
2,538,769	-				+0.2
2,538,769	-				+1.0
2,538,769	-				-0.1
2,538,769	-				-1.2
2,538,769	-				+0.1
2,538,769	-				-0.5
2,538,769	-				-0.1
2,538,800	+				+0.9
2,538,837	+				+0.2
2,538,837	+				+1.2
2,538,837	+				+0.5
2,538,837	+				+0.1
2,538,837	+				+1.1
2,538,837	+				+0.3
2,538,837	+				-0.2
2,538,838	-				+0.6
2,538,838	-				-2.2
2,538,838	-				-2.0
2,538,838	-				+0.3
2,538,838	-				-1.7
2,538,838	-				-0.6
2,538,838	-				+0.2
2,538,838	-				-1.8
2,538,838	-				+0.4
2,538,838	-				-1.3
2,538,905	+				-0.3
2,538,905	+				-0.0
2,538,905	+				-0.4
2,538,905	+				+0.2
2,538,905	+				-2.5
2,538,905	+				+1.1
2,538,906	-				-1.2
2,538,906	-				+0.1
2,538,986	+				+0.1
2,538,986	+				-0.3
2,538,986	+				-1.4
2,538,986	+				-0.3
2,538,987	-				+0.8
2,538,987	-				+1.4
2,538,987	-				-2.5
2,539,037	+				+0.5
2,539,037	+				-0.8
2,539,037	+				+0.1
2,539,037	+				+0.8
2,539,037	+				+0.1
2,539,037	+				-1.1
2,539,037	+				+2.3
2,539,037	+				+0.9
2,539,037	+				+0.6
2,539,038	-				+0.9
2,539,038	-				-1.9
2,539,038	-				+1.4
2,539,052	+				-2.1
2,539,098	+				+0.3
2,539,098	+				-2.2
2,539,098	+				-0.7
2,539,098	+				-0.3
2,539,098	+				+0.3
2,539,098	+				-1.6
2,539,098	+				+1.0
2,539,098	+				-2.0
2,539,098	+				+0.1
2,539,099	-				+1.6
2,539,099	-				-0.9
2,539,099	-				+1.4
2,539,099	-				+0.7
2,539,099	-				-1.9
2,539,099	-				+0.8
2,539,099	-				-0.1
2,539,099	-				-0.2
2,539,099	-				-1.2
2,539,099	-				+0.0
2,539,099	-				+0.2
2,539,099	-				+1.4
2,539,099	-				+0.6
2,539,099	-				-2.1
2,539,099	-				+1.1
2,539,099	-				+0.2
2,539,099	-				+0.5
2,539,099	-				-0.9
2,539,099	-				+0.6
2,539,102	+				-0.9
2,539,102	+				-1.3
2,539,102	+				-1.3
2,539,102	+				-2.0
2,539,102	+				+0.4
2,539,102	+				+3.0
2,539,102	+				+1.4
2,539,102	+				+1.1
2,539,102	+				-1.1
2,539,102	+				-0.8
2,539,102	+				+0.5
2,539,102	+				+0.3
2,539,103	-				-0.8
2,539,103	-				+0.4
2,539,103	-				+0.7
2,539,103	-				+0.4
2,539,103	-				+0.1
2,539,103	-				-0.9
2,539,103	-				+0.1
2,539,103	-				+0.5
2,539,103	-				+0.1
2,539,103	-				+0.2
2,539,103	-				-0.0
2,539,103	-				-1.2
2,539,111	+				-0.5
2,539,111	+				-0.5
2,539,112	-				+1.1
2,539,128	+				+0.2
2,539,129	-				-0.6
2,539,154	-				-2.2
2,539,154	-				-0.4
2,539,161	+				+0.0
2,539,161	+				-1.1
2,539,161	+				+0.1
2,539,161	+				-0.2
2,539,161	+				-0.2
2,539,161	+				+0.4
2,539,161	+				+1.1
2,539,161	+				+1.9
2,539,161	+				-0.7
2,539,162	-				+0.4
2,539,162	-				+0.1
2,539,162	-				+0.0
2,539,162	-				+0.1
2,539,162	-				-2.4
2,539,162	-				-0.1
2,539,162	-				-0.8
2,539,162	-				+0.2
2,539,162	-				-0.5
2,539,168	+				+0.4
2,539,168	+				+0.7
2,539,168	+				+1.4
2,539,168	+				+1.0
2,539,168	+				+0.3
2,539,168	+				+0.6
2,539,168	+				+0.0
2,539,168	+				+0.5
2,539,168	+				+1.0
2,539,168	+				-1.3
2,539,168	+				-1.2
2,539,169	-				-0.3
2,539,169	-				-1.5
2,539,169	-				+0.8
2,539,169	-				+1.4
2,539,169	-				+1.8
2,539,169	-				+0.5
2,539,169	-				+1.7
2,539,169	-				-0.6
2,539,169	-				-0.2
2,539,169	-				-0.5
2,539,169	-				+2.4
2,539,169	-				+0.6
2,539,187	+				+0.1
2,539,187	+				-1.1
2,539,187	+				+1.4
2,539,188	-				-1.9
2,539,190	+				+0.2
2,539,190	+				-0.3
2,539,190	+				+1.4
2,539,190	+				+1.6
2,539,190	+				+0.9
2,539,190	+				+0.5
2,539,190	+				-0.6
2,539,190	+				-1.4
2,539,190	+				+0.8
2,539,190	+				-0.7
2,539,190	+				-0.9
2,539,190	+				+0.6
2,539,190	+				+0.2
2,539,190	+				+0.8
2,539,190	+				-0.2
2,539,190	+				-1.2
2,539,191	-				-0.7
2,539,191	-				-1.6
2,539,191	-				-1.1
2,539,191	-				-0.2
2,539,191	-				+1.4
2,539,191	-				-0.6
2,539,191	-				-0.4
2,539,191	-				+0.4
2,539,191	-				+0.8
2,539,235	+		AO353_11490	0.11	+1.7
2,539,255	+		AO353_11490	0.18	+1.9
2,539,255	+		AO353_11490	0.18	+1.4
2,539,255	+		AO353_11490	0.18	-1.4
2,539,256	-		AO353_11490	0.18	+1.2
2,539,256	-		AO353_11490	0.18	+1.2
2,539,256	-		AO353_11490	0.18	-0.6
2,539,256	-		AO353_11490	0.18	-2.4
2,539,256	-		AO353_11490	0.18	-0.2
2,539,256	-		AO353_11490	0.18	-1.5
2,539,294	-		AO353_11490	0.31	-1.7
2,539,306	+		AO353_11490	0.35	+1.4
2,539,306	+		AO353_11490	0.35	-0.3
2,539,306	+		AO353_11490	0.35	+0.0
2,539,306	+		AO353_11490	0.35	-0.8
2,539,307	-		AO353_11490	0.35	-0.8
2,539,307	-		AO353_11490	0.35	+0.7
2,539,307	-		AO353_11490	0.35	+1.0
2,539,307	-		AO353_11490	0.35	-0.3
2,539,307	-		AO353_11490	0.35	-0.8
2,539,347	+		AO353_11490	0.49	-0.4
2,539,359	+		AO353_11490	0.53	-0.3
2,539,360	-		AO353_11490	0.53	-0.1
2,539,415	-		AO353_11490	0.72	+0.4
2,539,415	-		AO353_11490	0.72	+0.5
2,539,456	+		AO353_11490	0.86	+0.1
2,539,456	+		AO353_11490	0.86	+0.0
2,539,457	-		AO353_11490	0.86	-0.7
2,539,467	+				-0.3
2,539,529	-				+2.0
2,539,564	+				+0.4
2,539,564	+				-0.3
2,539,564	+				-0.2
2,539,564	+				-0.6
2,539,564	+				-0.2
2,539,564	+				+0.2
2,539,564	+				+1.5
2,539,564	+				+0.2
2,539,564	+				+1.0
2,539,564	+				-2.1
2,539,564	+				-0.9
2,539,565	-				+1.1
2,539,565	-				-0.4
2,539,565	-				+2.2
2,539,565	-				+1.0
2,539,565	-				-1.3
2,539,592	-				-0.5
2,539,602	+				-1.4
2,539,603	-				+1.0
2,539,663	+				-0.9
2,539,674	-				-0.2