Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11340

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
2,504,175	+		AO353_11330	0.68	+0.7
2,504,175	+		AO353_11330	0.68	-0.4
2,504,175	+		AO353_11330	0.68	-1.6
2,504,176	-		AO353_11330	0.68	-1.1
2,504,226	+		AO353_11330	0.79	-0.8
2,504,226	+		AO353_11330	0.79	-0.6
2,504,226	+		AO353_11330	0.79	-1.1
2,504,226	+		AO353_11330	0.79	+0.6
2,504,227	-		AO353_11330	0.79	+1.0
2,504,227	-		AO353_11330	0.79	-0.3
2,504,227	-		AO353_11330	0.79	+0.1
2,504,227	-		AO353_11330	0.79	+0.9
2,504,257	+		AO353_11330	0.85	+0.8
2,504,257	+		AO353_11330	0.85	-0.6
2,504,257	+		AO353_11330	0.85	-1.4
2,504,257	+		AO353_11330	0.85	-1.5
2,504,257	+		AO353_11330	0.85	-1.6
2,504,257	+		AO353_11330	0.85	+0.6
2,504,257	+		AO353_11330	0.85	+1.1
2,504,257	+		AO353_11330	0.85	+0.1
2,504,258	-		AO353_11330	0.85	-0.5
2,504,258	-		AO353_11330	0.85	+1.4
2,504,277	+		AO353_11330	0.90	-0.3
2,504,277	+		AO353_11330	0.90	-1.3
2,504,305	+				-0.9
2,504,305	+				+1.7
2,504,305	+				-0.9
2,504,305	+				-1.3
2,504,306	-				-1.8
2,504,323	-				+0.9
2,504,330	-				+0.6
2,504,330	-				+1.7
2,504,330	-				-0.0
2,504,330	-				-0.7
2,504,330	-				+0.0
2,504,330	-				+0.4
2,504,330	-				-1.2
2,504,330	-				+0.8
2,504,330	-				-0.1
2,504,330	-				+0.2
2,504,330	-				+1.9
2,504,330	-				+1.4
2,504,330	-				-0.1
2,504,330	-				-0.6
2,504,330	-				-0.8
2,504,335	-				-1.4
2,504,449	+				+1.1
2,504,449	+				+1.4
2,504,483	+				-0.9
2,504,484	-				+0.2
2,504,715	+				-0.3
2,504,715	+				+0.6
2,504,716	-				-0.2
2,504,749	+				-1.3
2,504,749	+				+0.1
2,504,749	+				+0.4
2,504,749	+				+0.7
2,504,749	+				-0.3
2,504,749	+				+0.8
2,504,749	+				-0.6
2,504,749	+				+1.0
2,504,749	+				-1.1
2,504,750	-				-1.8
2,504,750	-				+0.8
2,504,750	-				+0.8
2,504,750	-				+1.4
2,504,750	-				+2.6
2,504,750	-				+0.5
2,504,750	-				+0.0
2,504,750	-				-0.2
2,504,750	-				+0.1
2,504,750	-				+0.8
2,504,750	-				+0.8
2,504,750	-				-0.9
2,504,750	-				-0.9
2,504,750	-				-0.0
2,504,750	-				-0.0
2,504,750	-				+0.6
2,504,750	-				-2.0
2,504,878	-				+0.2
2,504,890	+				+0.4
2,504,891	-				+0.6
2,504,891	-				-0.2
2,504,891	-				-0.0
2,504,904	+				-0.1
2,504,904	+				-1.1
2,504,904	+				+0.8
2,504,905	-				+1.6
2,504,905	-				+0.5
2,504,905	-				+0.8
2,504,905	-				+0.6
2,504,906	+				+0.2
2,504,906	+				+0.9
2,504,906	+				-0.5
2,504,906	+				-0.1
2,504,906	+				-0.3
2,504,906	+				-1.9
2,504,906	+				+0.9
2,504,906	+				-1.2
2,504,906	+				-0.8
2,504,906	+				-0.2
2,504,906	+				-0.5
2,504,906	+				-0.9
2,504,906	+				-0.4
2,504,906	+				-0.2
2,504,906	+				+0.8
2,504,906	+				-1.4
2,504,906	+				+1.1
2,504,906	+				-0.2
2,504,907	-				-0.9
2,504,907	-				+0.4
2,504,907	-				+1.3
2,504,907	-				+1.4
2,504,907	-				-0.6
2,504,907	-				+0.1
2,504,907	-				+0.5
2,504,907	-				-0.2
2,504,907	-				-0.0
2,504,907	-				-1.2
2,504,907	-				-0.4
2,504,907	-				+0.5
2,504,907	-				+1.1
2,504,907	-				-0.6
2,504,907	-				+0.7
2,504,907	-				+0.6
2,504,907	-				+0.6
2,504,907	-				-1.8
2,504,907	-				+0.7
2,504,907	-				-0.8
2,504,907	-				-0.1
2,504,988	-				-1.5
2,505,173	-		AO353_11340	0.17	-1.4
2,505,173	-		AO353_11340	0.17	-1.9
2,505,173	-		AO353_11340	0.17	+0.1
2,505,316	+		AO353_11340	0.50	+0.3
2,505,550	+				-0.3
2,505,550	+				-1.3
2,505,584	+				+0.4
2,505,584	+				-0.9
2,505,584	+				+0.7
2,505,584	+				+1.1
2,505,584	+				-0.4
2,505,585	-				-0.4
2,505,585	-				+1.5
2,505,612	+				-0.4
2,505,612	+				+0.6
2,505,612	+				+0.3
2,505,612	+				+0.4
2,505,612	+				-1.2
2,505,612	+				-1.2
2,505,612	+				-0.6
2,505,612	+				+0.5
2,505,613	-				-1.0
2,505,613	-				-0.2
2,505,613	-				-1.2
2,505,613	-				+0.9
2,505,613	-				+0.6
2,505,613	-				-0.1
2,505,666	+				-0.3
2,505,666	+				-1.6
2,505,666	+				-0.9
2,505,666	+				-1.3
2,505,666	+				+0.5
2,505,666	+				-0.6
2,505,666	+				-0.1
2,505,666	+				+1.0
2,505,667	-				-0.6
2,505,667	-				+0.3
2,505,667	-				-1.6
2,505,667	-				-1.6
2,505,667	-				+1.7
2,505,667	-				-0.6
2,505,667	-				-0.9
2,505,667	-				-0.6
2,505,667	-				-0.9
2,505,667	-				+0.6
2,505,667	-				-0.1
2,505,667	-				+1.0
2,505,667	-				-1.8
2,505,667	-				+0.1
2,505,667	-				-0.9
2,505,715	-				+0.5
2,505,786	+		AO353_11345	0.12	-0.6
2,505,786	+		AO353_11345	0.12	-2.7
2,505,786	+		AO353_11345	0.12	-0.3
2,505,787	-		AO353_11345	0.12	+1.2
2,505,787	-		AO353_11345	0.12	+0.1
2,505,787	-		AO353_11345	0.12	+0.6
2,505,787	-		AO353_11345	0.12	-0.2
2,505,787	-		AO353_11345	0.12	+0.0
2,505,787	-		AO353_11345	0.12	+0.5
2,505,860	+		AO353_11345	0.16	+1.7
2,505,861	-		AO353_11345	0.16	+0.6
2,505,861	-		AO353_11345	0.16	-0.5
2,505,861	-		AO353_11345	0.16	-0.2
2,505,861	-		AO353_11345	0.16	-1.7
2,505,861	-		AO353_11345	0.16	-0.5
2,505,861	-		AO353_11345	0.16	+1.2
2,505,861	-		AO353_11345	0.16	-0.1
2,505,864	+		AO353_11345	0.16	+0.2
2,505,864	+		AO353_11345	0.16	+0.6
2,505,864	+		AO353_11345	0.16	-0.2
2,505,864	+		AO353_11345	0.16	+2.0
2,505,865	-		AO353_11345	0.16	+0.5
2,505,865	-		AO353_11345	0.16	-1.2
2,506,004	+		AO353_11345	0.23	+1.4
2,506,004	+		AO353_11345	0.23	+1.1
2,506,004	+		AO353_11345	0.23	-0.5
2,506,004	+		AO353_11345	0.23	+1.4
2,506,004	+		AO353_11345	0.23	+0.7
2,506,005	-		AO353_11345	0.23	-0.2
2,506,005	-		AO353_11345	0.23	-1.3
2,506,005	-		AO353_11345	0.23	+2.4
2,506,005	-		AO353_11345	0.23	-1.7
2,506,005	-		AO353_11345	0.23	-0.1
2,506,005	-		AO353_11345	0.23	-0.9
2,506,005	-		AO353_11345	0.23	-0.5
2,506,005	-		AO353_11345	0.23	+2.5
2,506,077	+		AO353_11345	0.26	+1.0
2,506,077	+		AO353_11345	0.26	-1.4
2,506,077	+		AO353_11345	0.26	-0.7
2,506,078	-		AO353_11345	0.26	+2.0
2,506,078	-		AO353_11345	0.26	+3.3
2,506,078	-		AO353_11345	0.26	+0.9
2,506,288	-		AO353_11345	0.37	-0.2
2,506,288	-		AO353_11345	0.37	-1.1
2,506,288	-		AO353_11345	0.37	-0.6
2,506,288	-		AO353_11345	0.37	+1.1
2,506,288	-		AO353_11345	0.37	-0.4
2,506,288	-		AO353_11345	0.37	-0.4
2,506,479	+		AO353_11345	0.46	+0.1