Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11225

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
2,472,205	+				-2.1
2,472,230	+				+1.2
2,472,231	-				-0.9
2,472,295	+		AO353_11220	0.17	+0.6
2,472,295	+		AO353_11220	0.17	-0.7
2,472,361	+		AO353_11220	0.24	-0.6
2,472,361	+		AO353_11220	0.24	-0.5
2,472,361	+		AO353_11220	0.24	+0.6
2,472,361	+		AO353_11220	0.24	-0.9
2,472,361	+		AO353_11220	0.24	-0.5
2,472,361	+		AO353_11220	0.24	-0.3
2,472,362	-		AO353_11220	0.24	-1.0
2,472,362	-		AO353_11220	0.24	-0.3
2,472,362	-		AO353_11220	0.24	+1.1
2,472,362	-		AO353_11220	0.24	+1.7
2,472,362	-		AO353_11220	0.24	+1.4
2,472,418	+		AO353_11220	0.30	-0.8
2,472,418	+		AO353_11220	0.30	-0.3
2,472,419	-		AO353_11220	0.30	+1.2
2,472,465	+		AO353_11220	0.35	+0.5
2,472,614	+		AO353_11220	0.51	-0.1
2,472,615	-		AO353_11220	0.51	+0.9
2,472,615	-		AO353_11220	0.51	-0.6
2,472,615	-		AO353_11220	0.51	-0.9
2,472,615	-		AO353_11220	0.51	+0.4
2,472,655	+		AO353_11220	0.56	-1.0
2,472,655	+		AO353_11220	0.56	-0.7
2,472,655	+		AO353_11220	0.56	-1.3
2,472,656	-		AO353_11220	0.56	+0.5
2,472,656	-		AO353_11220	0.56	+0.7
2,472,920	+		AO353_11220	0.85	-1.1
2,472,920	+		AO353_11220	0.85	-0.9
2,472,920	+		AO353_11220	0.85	-0.8
2,472,920	+		AO353_11220	0.85	-0.9
2,472,920	+		AO353_11220	0.85	+0.7
2,472,921	-		AO353_11220	0.85	+0.1
2,472,921	-		AO353_11220	0.85	-0.3
2,472,921	-		AO353_11220	0.85	+1.4
2,472,921	-		AO353_11220	0.85	+1.0
2,472,921	-		AO353_11220	0.85	-1.5
2,472,975	+				-0.4
2,473,119	+				+0.0
2,473,119	+				-0.8
2,473,119	+				-0.8
2,473,120	-				-0.2
2,473,121	+				-0.3
2,473,122	-				+0.5
2,473,122	-				+0.7
2,473,122	-				+0.1
2,473,132	+				+0.2
2,473,133	-				-1.3
2,473,163	+				+1.2
2,473,163	+				-1.4
2,473,163	+				+2.6
2,473,164	-				+1.8
2,473,177	-				+0.8
2,473,185	-				+0.4
2,473,197	+				-0.5
2,473,198	-				+1.1
2,473,198	-				+0.0
2,473,347	+				+1.3
2,473,348	-				+1.7
2,473,425	-		AO353_11225	0.14	-1.3
2,473,425	-		AO353_11225	0.14	-1.0
2,473,507	+		AO353_11225	0.20	-2.1
2,473,525	-		AO353_11225	0.21	+0.2
2,473,556	+		AO353_11225	0.23	-0.2
2,473,556	+		AO353_11225	0.23	-0.1
2,473,557	-		AO353_11225	0.23	+0.3
2,473,557	-		AO353_11225	0.23	+0.7
2,473,557	-		AO353_11225	0.23	+0.1
2,473,557	-		AO353_11225	0.23	-1.0
2,473,664	+		AO353_11225	0.30	-0.4
2,473,665	-		AO353_11225	0.30	-0.9
2,473,665	-				+2.8
2,473,665	-		AO353_11225	0.30	-0.8
2,473,742	+		AO353_11225	0.35	-1.0
2,473,742	+		AO353_11225	0.35	-1.4
2,473,743	-		AO353_11225	0.35	-1.0
2,473,812	-		AO353_11225	0.39	-0.5
2,474,135	+		AO353_11225	0.60	-2.2
2,474,136	-		AO353_11225	0.60	+0.1
2,474,136	-		AO353_11225	0.60	-1.2
2,474,136	-		AO353_11225	0.60	-0.2
2,474,156	+		AO353_11225	0.62	-2.9
2,474,351	+		AO353_11225	0.74	-1.0
2,474,351	+		AO353_11225	0.74	-1.5
2,474,352	-		AO353_11225	0.75	+0.0
2,474,352	-		AO353_11225	0.75	+1.3
2,474,472	+		AO353_11225	0.82	-0.6
2,474,472	+		AO353_11225	0.82	-2.2
2,474,472	+		AO353_11225	0.82	-0.8
2,474,473	-		AO353_11225	0.82	-0.8
2,474,473	-		AO353_11225	0.82	-1.5
2,474,473	-		AO353_11225	0.82	+0.5
2,474,654	+				-2.3
2,474,654	+				-0.7
2,474,654	+				-0.9
2,474,654	+				-1.4
2,474,655	-				+0.1
2,474,655	-				+0.7
2,474,655	-				+1.4
2,474,655	-				+0.6
2,474,655	-				-1.1
2,474,655	-				-0.1
2,474,655	-				+1.2
2,474,655	-				+0.1
2,474,655	-				-0.6
2,474,662	+				-0.9
2,474,662	+				-1.7
2,474,663	-				+1.1
2,474,663	-				-1.4
2,474,721	-				-0.3
2,474,749	+				-1.1
2,474,768	+				-1.9
2,474,769	-				+2.4
2,474,780	+				+0.8
2,474,781	-				+0.6
2,474,838	+				+0.4
2,474,838	+				+0.4
2,474,839	-				-2.6
2,474,839	-				+0.6
2,474,839	-				-1.1
2,474,839	-				+1.4
2,475,187	-		AO353_11230	0.39	+0.6
2,475,187	-		AO353_11230	0.39	+0.7
2,475,402	+		AO353_11230	0.59	+0.4
2,475,402	+		AO353_11230	0.59	-1.1
2,475,402	+		AO353_11230	0.59	-0.8
2,475,402	+		AO353_11230	0.59	+1.3
2,475,403	-		AO353_11230	0.59	-0.9
2,475,403	-		AO353_11230	0.59	-0.3
2,475,403	-		AO353_11230	0.59	+0.3
2,475,403	-		AO353_11230	0.59	+0.0
2,475,403	-		AO353_11230	0.59	+1.0
2,475,404	+		AO353_11230	0.59	+0.3
2,475,404	+		AO353_11230	0.59	+0.7
2,475,405	-		AO353_11230	0.59	+0.1
2,475,465	+		AO353_11230	0.65	+0.0
2,475,465	+		AO353_11230	0.65	+1.9
2,475,465	+		AO353_11230	0.65	-0.5
2,475,465	+		AO353_11230	0.65	-0.6
2,475,465	+		AO353_11230	0.65	-2.1
2,475,465	+		AO353_11230	0.65	-0.1
2,475,465	+		AO353_11230	0.65	+1.2
2,475,465	+		AO353_11230	0.65	-1.1
2,475,465	+		AO353_11230	0.65	+0.1
2,475,465	+		AO353_11230	0.65	+0.8
2,475,465	+		AO353_11230	0.65	-0.7
2,475,466	-		AO353_11230	0.65	+0.4
2,475,466	-		AO353_11230	0.65	+1.9
2,475,466	-		AO353_11230	0.65	-1.1
2,475,466	-		AO353_11230	0.65	+0.4
2,475,466	-		AO353_11230	0.65	+0.7
2,475,466	-		AO353_11230	0.65	-0.1
2,475,466	-		AO353_11230	0.65	-0.0
2,475,466	-		AO353_11230	0.65	+2.5
2,475,466	-		AO353_11230	0.65	+0.4
2,475,466	-		AO353_11230	0.65	-0.7
2,475,466	-		AO353_11230	0.65	-0.4
2,475,466	-		AO353_11230	0.65	+0.5
2,475,466	-		AO353_11230	0.65	+0.8
2,475,516	+		AO353_11230	0.70	-0.3
2,475,516	+		AO353_11230	0.70	-0.9
2,475,516	+		AO353_11230	0.70	+0.2
2,475,516	+		AO353_11230	0.70	-0.0
2,475,516	+		AO353_11230	0.70	+0.0
2,475,516	+		AO353_11230	0.70	-0.9
2,475,516	+		AO353_11230	0.70	+0.1
2,475,516	+		AO353_11230	0.70	-0.2
2,475,516	+		AO353_11230	0.70	+1.5
2,475,516	+		AO353_11230	0.70	-0.8
2,475,516	+		AO353_11230	0.70	-0.2
2,475,516	+		AO353_11230	0.70	+1.1
2,475,516	+		AO353_11230	0.70	+1.2
2,475,516	+		AO353_11230	0.70	-2.0
2,475,516	+		AO353_11230	0.70	+0.4
2,475,516	+		AO353_11230	0.70	-0.6
2,475,517	-		AO353_11230	0.70	-2.1
2,475,517	-		AO353_11230	0.70	+1.0
2,475,517	-		AO353_11230	0.70	-0.6
2,475,517	-		AO353_11230	0.70	+0.5
2,475,517	-		AO353_11230	0.70	-0.5
2,475,517	-		AO353_11230	0.70	+1.7
2,475,517	-		AO353_11230	0.70	+0.1
2,475,517	-		AO353_11230	0.70	-0.4
2,475,517	-		AO353_11230	0.70	+1.4
2,475,517	-		AO353_11230	0.70	+1.1
2,475,517	-		AO353_11230	0.70	+0.1
2,475,517	-		AO353_11230	0.70	+0.2
2,475,517	-		AO353_11230	0.70	-0.9
2,475,517	-		AO353_11230	0.70	-1.2
2,475,517	-		AO353_11230	0.70	-1.1
2,475,517	-		AO353_11230	0.70	-1.1
2,475,517	-		AO353_11230	0.70	-0.1
2,475,517	-		AO353_11230	0.70	-0.5
2,475,517	-		AO353_11230	0.70	-0.4
2,475,556	+		AO353_11230	0.73	-0.8
2,475,556	+		AO353_11230	0.73	-0.9
2,475,557	-		AO353_11230	0.74	-0.0
2,475,557	-		AO353_11230	0.74	-0.1
2,475,557	-		AO353_11230	0.74	+1.1
2,475,557	-		AO353_11230	0.74	+0.1
2,475,557	-		AO353_11230	0.74	+1.4
2,475,557	-		AO353_11230	0.74	-0.8
2,475,591	-		AO353_11230	0.77	+1.1