Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10995

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
2,401,860	+		AO353_10990	0.46	-0.2
2,401,860	+		AO353_10990	0.46	-1.2
2,401,860	+		AO353_10990	0.46	+1.5
2,401,860	+		AO353_10990	0.46	-0.1
2,401,861	-		AO353_10990	0.46	+0.8
2,401,861	-		AO353_10990	0.46	+1.9
2,401,861	-		AO353_10990	0.46	+0.2
2,401,861	-		AO353_10990	0.46	+0.0
2,401,861	-		AO353_10990	0.46	-0.4
2,401,957	-		AO353_10990	0.53	+2.2
2,401,957	-		AO353_10990	0.53	-0.7
2,401,984	+		AO353_10990	0.55	+0.8
2,401,984	+		AO353_10990	0.55	+0.1
2,401,984	+		AO353_10990	0.55	-1.0
2,401,985	-		AO353_10990	0.55	-0.9
2,401,985	-		AO353_10990	0.55	+0.2
2,401,985	-		AO353_10990	0.55	+1.2
2,402,067	+		AO353_10990	0.61	+0.8
2,402,067	+		AO353_10990	0.61	+0.8
2,402,125	-		AO353_10990	0.66	+1.4
2,402,141	+		AO353_10990	0.67	+1.3
2,402,141	+		AO353_10990	0.67	+1.9
2,402,141	+		AO353_10990	0.67	+0.3
2,402,141	+		AO353_10990	0.67	+0.3
2,402,142	-		AO353_10990	0.67	+1.6
2,402,142	-		AO353_10990	0.67	+2.8
2,402,142	-		AO353_10990	0.67	-0.6
2,402,200	-		AO353_10990	0.71	+1.2
2,402,200	-		AO353_10990	0.71	+0.1
2,402,200	-		AO353_10990	0.71	+0.5
2,402,235	+		AO353_10990	0.74	+1.1
2,402,235	+		AO353_10990	0.74	-1.3
2,402,235	+		AO353_10990	0.74	-0.9
2,402,236	-		AO353_10990	0.74	+0.2
2,402,236	-		AO353_10990	0.74	+1.8
2,402,275	+		AO353_10990	0.77	-1.5
2,402,483	+				-0.4
2,402,483	+				-0.2
2,402,483	+				+1.4
2,402,483	+				+0.3
2,402,483	+				-2.0
2,402,483	+				-0.8
2,402,483	+				-0.8
2,402,483	+				+0.2
2,402,483	+				+0.7
2,402,483	+				-1.0
2,402,483	+				-0.8
2,402,483	+				+0.6
2,402,483	+				-1.9
2,402,483	+				+0.3
2,402,484	-				+0.9
2,402,484	-				+0.8
2,402,484	-				-0.4
2,402,484	-				+0.9
2,402,484	-				+0.2
2,402,484	-				+2.0
2,402,484	-				+0.7
2,402,484	-				-0.4
2,402,487	+				+0.2
2,402,487	+				+0.1
2,402,487	+				-0.6
2,402,487	+				-0.2
2,402,487	+				+0.4
2,402,487	+				+0.3
2,402,487	+				-1.4
2,402,487	+				-0.5
2,402,487	+				-2.2
2,402,487	+				-0.8
2,402,487	+				-0.1
2,402,488	-				+1.4
2,402,488	-				+1.4
2,402,488	-				+0.4
2,402,488	-				+0.4
2,402,488	-				+0.5
2,402,488	-				+0.6
2,402,488	-				-1.2
2,402,488	-				+2.8
2,402,488	-				-1.5
2,402,488	-				+2.0
2,402,488	-				+1.1
2,402,488	-				+0.4
2,402,488	-				-0.1
2,402,488	-				+0.6
2,402,488	-				-0.2
2,402,511	+				-0.0
2,402,511	+				+0.7
2,402,592	+				-0.4
2,402,592	+				-0.4
2,402,593	-				+1.3
2,402,610	+				+0.1
2,402,610	+				+1.4
2,402,610	+				-1.3
2,402,610	+				+0.2
2,402,610	+				-0.7
2,402,610	+				+0.1
2,402,610	+				+1.7
2,402,611	-				+1.9
2,402,611	-				-0.4
2,402,611	-				+1.0
2,402,611	-				+0.4
2,402,611	-				+0.9
2,402,611	-				+1.5
2,402,611	-				-1.0
2,402,616	+				+0.8
2,402,616	+				-1.1
2,402,616	+				-0.4
2,402,616	+				-0.4
2,402,616	+				+1.1
2,402,616	+				-0.0
2,402,616	+				-0.6
2,402,616	+				+1.0
2,402,616	+				-0.6
2,402,616	+				-0.9
2,402,616	+				+1.7
2,402,617	-				+0.2
2,402,617	-				+1.0
2,402,617	-				+1.6
2,402,617	-				+1.4
2,402,617	-				+0.8
2,402,617	-				+1.3
2,402,617	-				-0.9
2,402,617	-				-0.6
2,403,173	+		AO353_10995	0.38	-2.0
2,403,173	+		AO353_10995	0.38	+0.1
2,403,173	+		AO353_10995	0.38	-2.0
2,403,173	+		AO353_10995	0.38	-0.9
2,403,173	+		AO353_10995	0.38	-1.3
2,403,173	+		AO353_10995	0.38	-1.9
2,403,173	+		AO353_10995	0.38	-2.8
2,403,174	-		AO353_10995	0.38	-1.0
2,403,174	-		AO353_10995	0.38	-1.6
2,403,174	-		AO353_10995	0.38	+0.4
2,403,184	-		AO353_10995	0.39	-1.5
2,403,184	-		AO353_10995	0.39	-3.0
2,403,184	-		AO353_10995	0.39	-2.5
2,403,184	-		AO353_10995	0.39	-1.2
2,403,324	+		AO353_10995	0.50	-2.0
2,403,324	+		AO353_10995	0.50	-1.4
2,403,325	-		AO353_10995	0.50	-0.8
2,403,486	+		AO353_10995	0.63	-1.9
2,403,486	+		AO353_10995	0.63	-2.2
2,403,546	+		AO353_10995	0.68	-1.6
2,403,546	+		AO353_10995	0.68	-0.8
2,403,546	+		AO353_10995	0.68	-1.4
2,403,547	-		AO353_10995	0.68	+1.1
2,403,547	-		AO353_10995	0.68	-0.8
2,403,547	-		AO353_10995	0.68	-0.9
2,403,577	+		AO353_10995	0.71	-1.0
2,403,577	+		AO353_10995	0.71	-2.3
2,403,578	-		AO353_10995	0.71	-1.4
2,403,578	-		AO353_10995	0.71	-3.0
2,403,578	-		AO353_10995	0.71	-2.8
2,403,578	-		AO353_10995	0.71	-1.3
2,403,578	-		AO353_10995	0.71	-1.6
2,403,578	-		AO353_10995	0.71	-0.6
2,403,779	+		AO353_10995	0.87	-2.0
2,403,780	-		AO353_10995	0.87	-0.6
2,403,780	-		AO353_10995	0.87	-1.8
2,403,807	+		AO353_10995	0.90	-2.8
2,403,807	+		AO353_10995	0.90	-2.9
2,403,807	+		AO353_10995	0.90	-1.0
2,403,807	+		AO353_10995	0.90	-0.6
2,403,807	+		AO353_10995	0.90	-2.5
2,403,807	+		AO353_10995	0.90	-0.9
2,403,807	+		AO353_10995	0.90	-2.1
2,403,807	+		AO353_10995	0.90	-1.9
2,403,807	+		AO353_10995	0.90	-1.8
2,403,807	+		AO353_10995	0.90	+0.3
2,403,807	+		AO353_10995	0.90	-0.8
2,403,807	+		AO353_10995	0.90	-0.3
2,403,807	+		AO353_10995	0.90	-1.8
2,403,807	+		AO353_10995	0.90	-2.5
2,403,807	+		AO353_10995	0.90	+0.4
2,403,807	+		AO353_10995	0.90	-0.6
2,403,807	+		AO353_10995	0.90	-1.5
2,403,807	+		AO353_10995	0.90	-1.0
2,403,807	+		AO353_10995	0.90	-0.6
2,403,807	+		AO353_10995	0.90	+0.1
2,403,807	+		AO353_10995	0.90	-3.4
2,403,807	+		AO353_10995	0.90	-1.8
2,403,807	+		AO353_10995	0.90	+0.4
2,403,808	-		AO353_10995	0.90	-0.7
2,403,808	-		AO353_10995	0.90	-0.4
2,403,808	-		AO353_10995	0.90	+1.0
2,403,808	-		AO353_10995	0.90	+0.2
2,403,808	-		AO353_10995	0.90	+0.6
2,403,808	-		AO353_10995	0.90	-0.7
2,403,808	-		AO353_10995	0.90	-0.1
2,403,808	-		AO353_10995	0.90	-1.9
2,403,808	-		AO353_10995	0.90	-1.4
2,403,808	-		AO353_10995	0.90	-1.5
2,403,808	-		AO353_10995	0.90	-1.7
2,403,808	-		AO353_10995	0.90	-1.3
2,403,808	-		AO353_10995	0.90	-2.0
2,403,808	-		AO353_10995	0.90	-1.5
2,403,808	-		AO353_10995	0.90	+0.1
2,403,808	-		AO353_10995	0.90	-0.8
2,403,808	-		AO353_10995	0.90	+0.4
2,403,808	-		AO353_10995	0.90	-1.2
2,403,808	-		AO353_10995	0.90	+2.0
2,403,822	+				-0.8
2,403,823	-				+0.4
2,403,823	-				-0.6
2,403,823	-				-3.6
2,403,942	+				+1.2
2,403,943	-				+0.3
2,403,987	+				-2.4
2,403,987	+				-1.3
2,403,987	+				-0.9
2,403,987	+				-0.0
2,403,987	+				+0.1
2,404,009	-				+1.8
2,404,009	-				+0.0
2,404,033	-				-0.4
2,404,080	+				-0.5
2,404,080	+				+0.7
2,404,080	+				+1.4
2,404,081	-				-1.0
2,404,081	-				+0.6
2,404,081	-				+0.6
2,404,081	-				-0.1
2,404,091	+				+0.2
2,404,092	-				+1.4
2,404,092	-				-0.6
2,404,092	-				+1.4
2,404,092	-				+0.1
2,404,110	+				-1.3
2,404,300	+		AO353_11000	0.36	+0.6
2,404,301	-		AO353_11000	0.36	+0.8
2,404,301	-		AO353_11000	0.36	+1.1
2,404,301	-		AO353_11000	0.36	+0.8
2,404,380	+		AO353_11000	0.48	-1.6
2,404,380	+		AO353_11000	0.48	+1.2
2,404,380	+		AO353_11000	0.48	-0.9
2,404,380	+		AO353_11000	0.48	-0.8
2,404,380	+		AO353_11000	0.48	+0.8
2,404,381	-		AO353_11000	0.48	-0.6
2,404,381	-		AO353_11000	0.48	+0.1
2,404,437	-		AO353_11000	0.57	+1.7
2,404,437	-		AO353_11000	0.57	+0.6
2,404,462	+		AO353_11000	0.61	+0.7
2,404,462	+		AO353_11000	0.61	+0.8
2,404,462	+		AO353_11000	0.61	-0.8
2,404,462	+		AO353_11000	0.61	+1.0
2,404,463	-		AO353_11000	0.61	-1.4
2,404,463	-		AO353_11000	0.61	+1.6
2,404,463	-		AO353_11000	0.61	-0.4
2,404,463	-		AO353_11000	0.61	-0.2
2,404,463	-		AO353_11000	0.61	+1.4
2,404,463	-		AO353_11000	0.61	+0.7
2,404,535	+		AO353_11000	0.72	-0.9
2,404,535	+		AO353_11000	0.72	-0.8
2,404,535	+		AO353_11000	0.72	+1.4
2,404,535	+		AO353_11000	0.72	-0.4
2,404,536	-		AO353_11000	0.72	-0.4
2,404,536	-		AO353_11000	0.72	-0.9
2,404,536	-		AO353_11000	0.72	+1.7
2,404,536	-		AO353_11000	0.72	+0.8
2,404,536	-		AO353_11000	0.72	+0.2
2,404,545	+		AO353_11000	0.74	+0.3
2,404,545	+		AO353_11000	0.74	-2.1
2,404,546	-		AO353_11000	0.74	-0.6
2,404,636	-		AO353_11000	0.88	-0.3
2,404,636	-		AO353_11000	0.88	+0.2
2,404,750	-				+0.3
2,404,750	-				-0.2
2,404,790	+				+1.0
2,404,791	-				+0.8
2,404,791	-				+0.5
2,404,820	+		AO353_11005	0.12	+0.7
2,404,820	+		AO353_11005	0.12	-0.9
2,404,820	+		AO353_11005	0.12	+0.1
2,404,820	+		AO353_11005	0.12	+0.5
2,404,820	+		AO353_11005	0.12	-1.8
2,404,820	+		AO353_11005	0.12	+0.7
2,404,820	+		AO353_11005	0.12	-1.3
2,404,820	+		AO353_11005	0.12	+0.8