Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_09860

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
2,150,827	+		AO353_09850	0.85	+1.2
2,150,873	+				-0.8
2,150,873	+				+2.4
2,150,873	+				-1.1
2,150,873	+				+0.7
2,150,874	-				+0.8
2,150,874	-				+0.1
2,150,874	-				+0.4
2,150,874	-				-1.6
2,150,874	-				-0.1
2,150,874	-				+2.7
2,150,874	-				-0.9
2,150,874	-				-0.3
2,150,874	-				+0.3
2,150,874	-				-0.1
2,150,919	+				-0.3
2,150,919	+				-2.6
2,150,919	+				+0.5
2,150,919	+				-0.1
2,150,919	+				+0.3
2,150,919	+				+0.0
2,150,919	+				+0.4
2,150,919	+				+1.3
2,150,919	+				+0.5
2,150,920	-				+1.1
2,150,920	-				+0.6
2,150,920	-				+0.8
2,150,920	-				+0.8
2,150,926	+				+0.2
2,150,926	+				+1.2
2,150,926	+				-2.4
2,150,926	+				-0.4
2,150,926	+				-0.2
2,150,926	+				+0.8
2,150,926	+				-0.3
2,150,926	+				-0.4
2,150,926	+				+1.2
2,150,926	+				-1.9
2,150,926	+				-1.2
2,150,927	-				+0.1
2,150,927	-				-2.2
2,150,927	-				+0.1
2,150,927	-				+0.1
2,150,927	-				-1.0
2,150,927	-				+0.5
2,150,927	-				+1.2
2,150,927	-				+1.2
2,150,957	+				+1.2
2,150,962	+				+0.4
2,150,962	+				-0.5
2,150,962	+				-0.2
2,150,962	+				-0.0
2,150,963	-				-0.9
2,150,963	-				-0.3
2,150,963	-				-0.1
2,150,963	-				-0.3
2,150,963	-				+0.6
2,150,963	-				+0.3
2,150,963	-				-0.2
2,150,981	+				-1.2
2,150,981	+				+0.1
2,150,981	+				+0.1
2,150,981	+				-0.4
2,150,981	+				+0.5
2,150,981	+				-0.2
2,150,982	-				+1.3
2,150,982	-				+0.5
2,150,982	-				+1.1
2,150,994	+				-1.1
2,150,994	+				+0.1
2,150,994	+				+0.3
2,150,994	+				-1.9
2,150,994	+				+0.2
2,150,994	+				+0.4
2,150,994	+				-0.2
2,150,994	+				+0.1
2,150,994	+				-0.4
2,150,994	+				+0.5
2,150,994	+				+0.5
2,150,995	-				-0.7
2,150,995	-				-0.6
2,150,995	-				-0.7
2,150,995	-				-0.9
2,150,995	-				+1.0
2,150,995	-				-0.8
2,150,995	-				-0.1
2,150,995	-				+0.3
2,150,995	-				+0.6
2,150,995	-				-0.9
2,150,995	-				+0.6
2,150,995	-				-0.2
2,151,013	+				+0.8
2,151,013	+				+0.2
2,151,013	+				+0.1
2,151,013	+				+0.1
2,151,014	-				+0.4
2,151,014	-				-0.9
2,151,014	-				-1.0
2,151,014	-				+0.8
2,151,014	-				-0.8
2,151,014	-				+0.6
2,151,014	-				+0.5
2,151,014	-				+0.1
2,151,014	-				-1.0
2,151,014	-				-1.2
2,151,014	-				+0.5
2,151,029	+				-0.8
2,151,029	+				+0.2
2,151,029	+				-1.2
2,151,116	+		AO353_09855	0.12	+0.8
2,151,116	+		AO353_09855	0.12	-0.6
2,151,116	+		AO353_09855	0.12	+0.1
2,151,116	+		AO353_09855	0.12	-0.6
2,151,117	-		AO353_09855	0.12	-0.0
2,151,117	-		AO353_09855	0.12	+0.3
2,151,341	+		AO353_09855	0.44	+0.6
2,151,341	+		AO353_09855	0.44	+0.9
2,151,341	+		AO353_09855	0.44	-0.9
2,151,341	+		AO353_09855	0.44	-0.7
2,151,341	+		AO353_09855	0.44	-2.1
2,151,341	+		AO353_09855	0.44	+0.4
2,151,341	+		AO353_09855	0.44	-0.9
2,151,342	-		AO353_09855	0.44	+0.8
2,151,342	-		AO353_09855	0.44	+1.4
2,151,342	-		AO353_09855	0.44	-0.8
2,151,342	-		AO353_09855	0.44	-0.1
2,151,342	-		AO353_09855	0.44	+0.6
2,151,342	-		AO353_09855	0.44	+0.1
2,151,342	-		AO353_09855	0.44	-1.6
2,151,342	-		AO353_09855	0.44	-0.2
2,151,342	-		AO353_09855	0.44	-0.2
2,151,342	-		AO353_09855	0.44	+1.0
2,151,342	-		AO353_09855	0.44	+0.6
2,151,342	-		AO353_09855	0.44	-2.0
2,151,342	-		AO353_09855	0.44	+0.8
2,151,557	+		AO353_09855	0.76	+1.9
2,151,557	+		AO353_09855	0.76	+0.2
2,151,557	+		AO353_09855	0.76	+0.7
2,151,558	-		AO353_09855	0.76	-0.0
2,151,558	-		AO353_09855	0.76	-0.6
2,151,602	+		AO353_09855	0.82	+2.3
2,151,602	+		AO353_09855	0.82	+0.9
2,151,602	+		AO353_09855	0.82	-1.0
2,151,602	+		AO353_09855	0.82	+0.2
2,151,602	+		AO353_09855	0.82	+0.6
2,151,602	+		AO353_09855	0.82	+0.8
2,151,602	+		AO353_09855	0.82	+0.9
2,151,602	+		AO353_09855	0.82	+0.3
2,151,602	+		AO353_09855	0.82	-0.4
2,151,602	+		AO353_09855	0.82	-0.5
2,151,602	+		AO353_09855	0.82	-0.4
2,151,602	+		AO353_09855	0.82	-0.2
2,151,602	+		AO353_09855	0.82	-0.6
2,151,602	+		AO353_09855	0.82	+1.2
2,151,602	+		AO353_09855	0.82	+0.4
2,151,602	+		AO353_09855	0.82	-1.9
2,151,602	+		AO353_09855	0.82	-2.3
2,151,602	+		AO353_09855	0.82	+1.0
2,151,602	+		AO353_09855	0.82	+0.4
2,151,602	+		AO353_09855	0.82	+0.2
2,151,602	+		AO353_09855	0.82	+0.8
2,151,603	-		AO353_09855	0.82	-1.7
2,151,603	-		AO353_09855	0.82	-0.0
2,151,603	-		AO353_09855	0.82	-1.1
2,151,603	-		AO353_09855	0.82	-0.2
2,151,603	-		AO353_09855	0.82	+0.5
2,151,603	-		AO353_09855	0.82	+0.1
2,151,603	-		AO353_09855	0.82	-0.3
2,151,603	-		AO353_09855	0.82	+0.8
2,151,603	-		AO353_09855	0.82	-0.9
2,151,603	-		AO353_09855	0.82	-0.6
2,151,603	-		AO353_09855	0.82	+0.1
2,151,603	-		AO353_09855	0.82	+0.1
2,151,603	-		AO353_09855	0.82	-1.2
2,151,603	-		AO353_09855	0.82	-0.0
2,151,603	-		AO353_09855	0.82	-0.5
2,151,603	-		AO353_09855	0.82	-2.1
2,151,603	-		AO353_09855	0.82	+0.1
2,151,603	-		AO353_09855	0.82	+0.4
2,151,665	+				-0.8
2,151,679	-				+1.1
2,151,679	-				-1.7
2,151,712	+				+1.4
2,151,713	-				+1.0
2,151,734	+				-1.4
2,151,734	+				-0.1
2,151,734	+				-1.2
2,151,734	+				+0.5
2,151,734	+				+2.1
2,151,735	-				-0.4
2,151,735	-				+0.2
2,151,735	-				-0.2
2,151,767	+				+1.7
2,151,767	+				-1.4
2,151,767	+				+0.0
2,151,767	+				+0.1
2,151,767	+				-0.9
2,151,768	-				-0.2
2,151,768	-				-0.2
2,151,813	+				+1.4
2,151,847	+				-0.3
2,151,855	-				-0.8
2,151,855	-				+0.2
2,151,857	+				-2.5
2,151,857	+				-2.1
2,151,857	+				-0.4
2,151,890	+				+1.6
2,151,890	+				+0.3
2,151,890	+				-1.3
2,151,891	-				-0.4
2,151,891	-				-0.6
2,151,891	-				+1.6
2,151,891	-				-2.0
2,152,007	+		AO353_09860	0.18	-1.9
2,152,007	+		AO353_09860	0.18	-1.2
2,152,007	+		AO353_09860	0.18	-1.9
2,152,007	+		AO353_09860	0.18	-0.3
2,152,007	+		AO353_09860	0.18	-0.1
2,152,007	+		AO353_09860	0.18	-0.2
2,152,007	+		AO353_09860	0.18	-1.0
2,152,007	+		AO353_09860	0.18	+0.6
2,152,008	-		AO353_09860	0.18	-2.0
2,152,008	-		AO353_09860	0.18	-0.1
2,152,008	-		AO353_09860	0.18	-1.5
2,152,008	-		AO353_09860	0.18	-1.3
2,152,008	-		AO353_09860	0.18	-0.8
2,152,008	-		AO353_09860	0.18	-2.1
2,152,008	-		AO353_09860	0.18	-1.6
2,152,008	-		AO353_09860	0.18	-0.9
2,152,008	-		AO353_09860	0.18	-2.6
2,152,008	-		AO353_09860	0.18	-0.9
2,152,008	-		AO353_09860	0.18	+0.7
2,152,232	+		AO353_09860	0.35	-1.6
2,152,232	+		AO353_09860	0.35	+0.7
2,152,233	-		AO353_09860	0.35	-0.3
2,152,233	-		AO353_09860	0.35	+0.6
2,152,250	+		AO353_09860	0.36	+0.1
2,152,250	+		AO353_09860	0.36	-0.6
2,152,250	+		AO353_09860	0.36	-2.1
2,152,250	+		AO353_09860	0.36	-1.1
2,152,250	+		AO353_09860	0.36	-1.3
2,152,250	+		AO353_09860	0.36	+0.3
2,152,250	+		AO353_09860	0.36	-1.8
2,152,250	+		AO353_09860	0.36	-0.6
2,152,251	-		AO353_09860	0.36	-1.9
2,152,251	-		AO353_09860	0.36	+0.1
2,152,251	-		AO353_09860	0.36	-0.4
2,152,251	-		AO353_09860	0.36	-0.1
2,152,251	-		AO353_09860	0.36	-1.0
2,152,251	-		AO353_09860	0.36	+1.0
2,152,307	+		AO353_09860	0.41	+1.6
2,152,307	+		AO353_09860	0.41	-1.4
2,152,307	+		AO353_09860	0.41	+1.3
2,152,307	+		AO353_09860	0.41	-2.0
2,152,307	+		AO353_09860	0.41	-0.3
2,152,307	+		AO353_09860	0.41	+0.1
2,152,307	+		AO353_09860	0.41	+0.1
2,152,307	+		AO353_09860	0.41	-0.5
2,152,307	+		AO353_09860	0.41	-0.9
2,152,307	+		AO353_09860	0.41	-0.8
2,152,307	+		AO353_09860	0.41	-2.1
2,152,307	+		AO353_09860	0.41	-1.4
2,152,308	-		AO353_09860	0.41	-1.9
2,152,308	-		AO353_09860	0.41	-1.8
2,152,308	-		AO353_09860	0.41	-0.5
2,152,308	-		AO353_09860	0.41	-2.1
2,152,308	-		AO353_09860	0.41	+0.3
2,152,308	-		AO353_09860	0.41	-2.2
2,152,308	-		AO353_09860	0.41	-0.1
2,152,308	-		AO353_09860	0.41	-1.1
2,152,308	-		AO353_09860	0.41	-1.2
2,152,308	-		AO353_09860	0.41	-0.8
2,152,308	-		AO353_09860	0.41	-3.2
2,152,308	-		AO353_09860	0.41	+0.3
2,152,709	-		AO353_09860	0.71	+0.5
2,152,734	+		AO353_09860	0.73	+0.3
2,152,734	+		AO353_09860	0.73	-0.8
2,152,775	+		AO353_09860	0.76	-0.3
2,152,775	+		AO353_09860	0.76	-2.2
2,152,775	+		AO353_09860	0.76	-1.3
2,152,775	+		AO353_09860	0.76	+0.8
2,152,775	+		AO353_09860	0.76	-0.3
2,152,775	+		AO353_09860	0.76	+0.1
2,152,775	+		AO353_09860	0.76	-0.8
2,152,775	+		AO353_09860	0.76	+1.8
2,152,775	+		AO353_09860	0.76	+0.5
2,152,775	+		AO353_09860	0.76	-0.9
2,152,776	-		AO353_09860	0.76	-1.3
2,152,776	-		AO353_09860	0.76	+0.1
2,152,776	-		AO353_09860	0.76	+0.7
2,152,776	-		AO353_09860	0.76	+0.1
2,152,776	-		AO353_09860	0.76	-1.7
2,152,977	+				+0.6
2,152,978	-				-0.2
2,153,114	-				+1.2
2,153,114	-				-3.1
2,153,136	+				-0.2
2,153,137	-				+1.7
2,153,192	+				-2.0
2,153,192	+				-0.9
2,153,193	-				+0.2
2,153,194	+				+1.9
2,153,194	+				+0.2
2,153,194	+				+0.4
2,153,194	+				-0.4
2,153,194	+				+0.0
2,153,194	+				+0.3
2,153,194	+				-0.0
2,153,194	+				-0.7
2,153,194	+				-0.8
2,153,194	+				+0.3
2,153,194	+				-1.2
2,153,194	+				-0.6
2,153,195	-				+1.3
2,153,195	-				-0.9
2,153,195	-				-1.0
2,153,195	-				+0.5
2,153,195	-				+1.7
2,153,195	-				+1.8
2,153,195	-				+0.5
2,153,195	-				-1.5
2,153,195	-				+0.9
2,153,195	-				-0.6
2,153,195	-				-0.8
2,153,195	-				-1.1
2,153,373	-		AO353_09865	0.12	+1.0
2,153,373	-		AO353_09865	0.12	+0.6
2,153,407	+		AO353_09865	0.14	-0.8
2,153,407	+		AO353_09865	0.14	-1.4
2,153,407	+		AO353_09865	0.14	-0.2
2,153,408	-		AO353_09865	0.14	-0.7
2,153,408	-		AO353_09865	0.14	+1.6
2,153,408	-		AO353_09865	0.14	+1.4
2,153,427	+		AO353_09865	0.16	+0.3
2,153,427	+		AO353_09865	0.16	+0.0
2,153,427	+		AO353_09865	0.16	-1.0
2,153,427	+		AO353_09865	0.16	-0.3
2,153,428	-		AO353_09865	0.16	-1.7
2,153,428	-		AO353_09865	0.16	+0.6
2,153,428	-		AO353_09865	0.16	-0.7
2,153,428	-		AO353_09865	0.16	-0.6
2,153,428	-		AO353_09865	0.16	+0.1
2,153,428	-		AO353_09865	0.16	-1.5
2,153,585	+		AO353_09865	0.27	-0.3
2,153,585	+		AO353_09865	0.27	-0.8
2,153,585	+		AO353_09865	0.27	+0.2
2,153,585	+		AO353_09865	0.27	-1.1
2,153,586	-		AO353_09865	0.28	-1.4
2,153,586	-		AO353_09865	0.28	-2.1
2,153,586	-		AO353_09865	0.28	-0.3
2,153,586	-		AO353_09865	0.28	+0.0
2,153,595	+		AO353_09865	0.28	-1.1
2,153,685	+		AO353_09865	0.35	+0.7
2,153,685	+		AO353_09865	0.35	-0.1
2,153,685	+		AO353_09865	0.35	-0.8
2,153,685	+		AO353_09865	0.35	+0.5
2,153,686	-		AO353_09865	0.35	-0.5
2,153,686	-		AO353_09865	0.35	+0.5
2,153,694	+		AO353_09865	0.36	+0.2
2,153,694	+		AO353_09865	0.36	-0.2
2,153,694	+		AO353_09865	0.36	-0.3
2,153,694	+		AO353_09865	0.36	-1.1
2,153,695	-		AO353_09865	0.36	-0.5
2,153,695	-		AO353_09865	0.36	-0.3
2,153,707	-		AO353_09865	0.37	+1.2
2,153,707	-		AO353_09865	0.37	-0.7
2,153,707	-		AO353_09865	0.37	-1.5
2,153,707	-		AO353_09865	0.37	+0.3
2,153,718	+		AO353_09865	0.37	-1.3
2,153,718	+		AO353_09865	0.37	-1.1
2,153,719	-		AO353_09865	0.37	-1.5
2,153,719	-		AO353_09865	0.37	+1.7
2,153,719	-		AO353_09865	0.37	-0.4
2,153,719	-		AO353_09865	0.37	-0.8
2,153,719	-		AO353_09865	0.37	-3.2
2,153,726	+		AO353_09865	0.38	+0.1
2,153,727	-		AO353_09865	0.38	-0.2
2,153,727	-		AO353_09865	0.38	-0.9
2,153,796	+		AO353_09865	0.43	-0.0
2,153,797	-		AO353_09865	0.43	+0.9
2,153,797	-		AO353_09865	0.43	-2.1
2,153,797	-		AO353_09865	0.43	+0.4
2,153,869	+		AO353_09865	0.49	-0.2
2,153,869	+		AO353_09865	0.49	-0.1
2,153,869	+		AO353_09865	0.49	+0.0
2,153,869	+		AO353_09865	0.49	-0.5
2,153,870	-		AO353_09865	0.49	-0.5
2,153,870	-		AO353_09865	0.49	-1.4
2,153,870	-		AO353_09865	0.49	-1.7
2,153,870	-		AO353_09865	0.49	+0.2
2,153,870	-		AO353_09865	0.49	-1.5
2,154,015	+		AO353_09865	0.60	+1.1
2,154,016	-		AO353_09865	0.60	+0.1
2,154,016	-		AO353_09865	0.60	-0.4
2,154,016	-		AO353_09865	0.60	-1.3
2,154,016	-		AO353_09865	0.60	+2.4
2,154,016	-		AO353_09865	0.60	-0.5