Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_09390

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
2,061,811	+				+0.8
2,061,812	-				-1.0
2,061,812	-				+0.0
2,061,812	-				+0.8
2,061,856	+				-0.5
2,061,857	-				+0.5
2,061,910	+		AO353_09385	0.11	+2.6
2,061,910	+		AO353_09385	0.11	+0.8
2,061,910	+		AO353_09385	0.11	+0.2
2,061,910	+		AO353_09385	0.11	-0.1
2,061,910	+		AO353_09385	0.11	-1.8
2,061,910	+		AO353_09385	0.11	-0.6
2,061,910	+		AO353_09385	0.11	+1.4
2,061,910	+		AO353_09385	0.11	-1.8
2,061,910	+		AO353_09385	0.11	-1.3
2,061,911	-		AO353_09385	0.12	+2.1
2,061,911	-		AO353_09385	0.12	+1.0
2,061,911	-		AO353_09385	0.12	-1.1
2,061,911	-		AO353_09385	0.12	+1.3
2,061,911	-		AO353_09385	0.12	+3.0
2,061,911	-		AO353_09385	0.12	+0.4
2,061,911	-		AO353_09385	0.12	-1.0
2,061,911	-		AO353_09385	0.12	+0.0
2,061,911	-		AO353_09385	0.12	-1.0
2,061,911	-		AO353_09385	0.12	+0.8
2,061,965	+		AO353_09385	0.18	-2.1
2,061,965	+		AO353_09385	0.18	-2.1
2,061,965	+		AO353_09385	0.18	-0.8
2,061,965	+		AO353_09385	0.18	-1.2
2,061,965	+		AO353_09385	0.18	-1.8
2,061,966	-		AO353_09385	0.18	+0.4
2,061,966	-		AO353_09385	0.18	-1.3
2,061,966	-		AO353_09385	0.18	+1.7
2,062,026	+		AO353_09385	0.25	-0.3
2,062,027	-		AO353_09385	0.25	+0.2
2,062,111	+		AO353_09385	0.34	+0.4
2,062,111	+		AO353_09385	0.34	+0.4
2,062,144	+		AO353_09385	0.38	+0.4
2,062,144	+		AO353_09385	0.38	+0.0
2,062,144	+		AO353_09385	0.38	+1.1
2,062,144	+		AO353_09385	0.38	+0.2
2,062,144	+		AO353_09385	0.38	+0.4
2,062,144	+		AO353_09385	0.38	+1.1
2,062,144	+		AO353_09385	0.38	+0.8
2,062,144	+		AO353_09385	0.38	+0.3
2,062,144	+		AO353_09385	0.38	-0.4
2,062,144	+		AO353_09385	0.38	-0.4
2,062,144	+		AO353_09385	0.38	+1.4
2,062,144	+		AO353_09385	0.38	+0.5
2,062,145	-		AO353_09385	0.38	+0.3
2,062,145	-		AO353_09385	0.38	-0.8
2,062,145	-		AO353_09385	0.38	+1.1
2,062,145	-		AO353_09385	0.38	+1.4
2,062,145	-		AO353_09385	0.38	+1.4
2,062,145	-		AO353_09385	0.38	-0.2
2,062,145	-		AO353_09385	0.38	+0.4
2,062,145	-		AO353_09385	0.38	+1.6
2,062,145	-		AO353_09385	0.38	+0.8
2,062,345	-		AO353_09385	0.61	+0.0
2,062,345	-		AO353_09385	0.61	+0.6
2,062,515	-		AO353_09385	0.80	-1.4
2,062,515	-		AO353_09385	0.80	-0.6
2,062,549	+		AO353_09385	0.84	-0.2
2,062,549	+		AO353_09385	0.84	-1.2
2,062,550	-		AO353_09385	0.84	-2.1
2,062,550	-		AO353_09385	0.84	+0.9
2,062,812	+				+0.9
2,062,812	+				-0.8
2,062,812	+				-0.2
2,062,812	+				-0.2
2,062,812	+				+0.1
2,062,812	+				+0.7
2,062,813	-				-0.8
2,062,813	-				+0.7
2,062,813	-				-0.1
2,062,813	-				+0.2
2,063,046	+		AO353_09390	0.27	+1.4
2,063,238	+		AO353_09390	0.41	-0.4
2,063,239	-		AO353_09390	0.41	+0.1
2,063,239	-		AO353_09390	0.41	-1.1
2,063,239	-		AO353_09390	0.41	-1.6
2,063,274	+		AO353_09390	0.44	-1.7
2,063,274	+		AO353_09390	0.44	+0.0
2,063,274	+		AO353_09390	0.44	+0.0
2,063,274	+		AO353_09390	0.44	-1.2
2,063,275	-		AO353_09390	0.44	+0.6
2,063,275	-		AO353_09390	0.44	-0.1
2,063,275	-		AO353_09390	0.44	+0.1
2,063,380	+		AO353_09390	0.52	+0.5
2,063,434	-		AO353_09390	0.56	+0.3
2,063,538	+		AO353_09390	0.64	-0.1
2,063,538	+		AO353_09390	0.64	+0.9
2,063,538	+		AO353_09390	0.64	+0.4
2,063,538	+		AO353_09390	0.64	+0.0
2,063,538	+		AO353_09390	0.64	-0.8
2,063,538	+		AO353_09390	0.64	+0.4
2,063,538	+		AO353_09390	0.64	+2.2
2,063,539	-		AO353_09390	0.64	+1.1
2,063,539	-		AO353_09390	0.64	+1.4
2,063,539	-		AO353_09390	0.64	+0.8
2,063,539	-		AO353_09390	0.64	-0.9
2,063,539	-		AO353_09390	0.64	+1.1
2,063,539	-		AO353_09390	0.64	-0.2
2,063,658	+		AO353_09390	0.73	+0.9
2,063,733	+		AO353_09390	0.78	+0.2
2,063,733	+		AO353_09390	0.78	+0.1
2,063,734	-		AO353_09390	0.78	-0.6
2,063,904	+				+0.0
2,063,904	+				-0.3
2,063,904	+				+0.6
2,063,905	-				-0.2
2,063,905	-				-1.3
2,063,905	-				-0.4
2,063,905	-				-0.0
2,063,946	+				-1.1
2,063,946	+				+1.7
2,063,947	-				+0.6
2,063,947	-				+0.0
2,063,947	-				+0.6
2,063,947	-				+2.2
2,063,947	-				-1.8
2,063,949	+				-0.7
2,063,950	-				-0.6
2,063,950	-				-0.1
2,063,950	-				-1.1
2,064,010	+				+1.8
2,064,010	+				-0.8
2,064,010	+				+1.0
2,064,010	+				-0.6
2,064,011	-				+0.6
2,064,011	-				-0.7
2,064,057	+				-0.1
2,064,057	+				+1.1
2,064,057	+				-0.6
2,064,058	-				-0.4
2,064,058	-				-1.8
2,064,058	-				+1.1
2,064,060	+				-1.2
2,064,060	+				+0.4
2,064,061	-				+1.4
2,064,061	-				-1.0
2,064,061	-				+1.1
2,064,061	-				+0.8
2,064,128	+		AO353_09395	0.21	+0.0
2,064,129	-		AO353_09395	0.21	+0.7
2,064,129	-		AO353_09395	0.21	+0.0
2,064,290	+		AO353_09395	0.53	+0.6
2,064,290	+		AO353_09395	0.53	-0.1
2,064,290	+		AO353_09395	0.53	+0.2
2,064,290	+		AO353_09395	0.53	+2.4
2,064,290	+		AO353_09395	0.53	+1.2
2,064,340	+		AO353_09395	0.63	-0.4
2,064,341	-		AO353_09395	0.63	+0.7
2,064,502	+				+0.0
2,064,502	+				-1.1
2,064,502	+				-0.7
2,064,502	+				+2.0
2,064,502	+				-1.0
2,064,502	+				+1.2
2,064,502	+				+2.0
2,064,503	-				-0.4
2,064,503	-				-1.4
2,064,503	-				+1.1
2,064,503	-				+0.0
2,064,503	-				-1.8
2,064,505	+				-0.2
2,064,552	+				+0.3
2,064,552	+				+1.6
2,064,552	+				-0.2
2,064,552	+				+0.7
2,064,552	+				+0.7
2,064,553	-				+1.5
2,064,553	-				+0.5
2,064,553	-				-1.0
2,064,553	-				+1.4
2,064,583	+				-1.0
2,064,583	+				+0.9