Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08020

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
1,767,092	+				+1.2
1,767,092	+				+0.6
1,767,092	+				-1.0
1,767,093	-				+0.0
1,767,093	-				+0.0
1,767,093	-				-1.2
1,767,093	-				-0.4
1,767,111	-				-1.3
1,767,119	+				-1.1
1,767,119	+				-0.5
1,767,119	+				+0.8
1,767,120	-				-0.0
1,767,120	-				+1.7
1,767,136	-				+0.6
1,767,141	+				+0.4
1,767,141	+				-1.5
1,767,141	+				-0.4
1,767,141	+				-0.0
1,767,141	+				+0.9
1,767,141	+				-2.6
1,767,141	+				+1.1
1,767,141	+				-0.4
1,767,142	-				+0.6
1,767,142	-				+0.0
1,767,142	-				-0.1
1,767,142	-				-1.4
1,767,238	+		AO353_08015	0.11	+0.8
1,767,238	+		AO353_08015	0.11	-1.2
1,767,238	+		AO353_08015	0.11	+0.2
1,767,238	+		AO353_08015	0.11	+1.0
1,767,239	-		AO353_08015	0.11	-0.8
1,767,239	-		AO353_08015	0.11	+0.4
1,767,239	-		AO353_08015	0.11	+0.8
1,767,239	-		AO353_08015	0.11	-0.4
1,767,239	-		AO353_08015	0.11	-0.1
1,767,265	+		AO353_08015	0.15	-1.1
1,767,265	+		AO353_08015	0.15	+0.6
1,767,265	+		AO353_08015	0.15	+1.6
1,767,265	+		AO353_08015	0.15	+2.0
1,767,266	-		AO353_08015	0.15	-0.2
1,767,403	+		AO353_08015	0.31	+0.6
1,767,403	+		AO353_08015	0.31	+0.2
1,767,403	+		AO353_08015	0.31	-0.1
1,767,403	+		AO353_08015	0.31	-0.8
1,767,404	-		AO353_08015	0.31	+0.3
1,767,404	-		AO353_08015	0.31	-1.1
1,767,404	-		AO353_08015	0.31	-1.0
1,767,404	-		AO353_08015	0.31	-0.1
1,767,652	+		AO353_08015	0.60	-1.7
1,767,653	-		AO353_08015	0.60	+0.2
1,767,673	+		AO353_08015	0.63	+0.1
1,767,673	+		AO353_08015	0.63	-1.5
1,767,674	-		AO353_08015	0.63	-0.4
1,767,674	-		AO353_08015	0.63	-0.8
1,767,674	-		AO353_08015	0.63	+1.9
1,767,674	-		AO353_08015	0.63	-0.1
1,767,674	-		AO353_08015	0.63	-0.4
1,767,674	-		AO353_08015	0.63	-1.4
1,767,674	-		AO353_08015	0.63	+0.2
1,767,674	-		AO353_08015	0.63	-0.4
1,767,674	-		AO353_08015	0.63	+2.2
1,767,674	-		AO353_08015	0.63	-0.9
1,767,680	-		AO353_08015	0.64	+0.6
1,767,695	+		AO353_08015	0.65	-1.0
1,767,696	-		AO353_08015	0.65	-2.3
1,767,696	-		AO353_08015	0.65	-1.6
1,767,751	+		AO353_08015	0.72	+0.1
1,767,752	-		AO353_08015	0.72	-0.4
1,767,752	-		AO353_08015	0.72	-1.6
1,767,752	-		AO353_08015	0.72	-2.0
1,767,826	+		AO353_08015	0.81	-1.5
1,767,925	+				+1.6
1,767,925	+				+1.5
1,767,925	+				-1.5
1,767,925	+				-1.1
1,767,996	+				+1.5
1,767,996	+				+1.6
1,767,997	-				-1.6
1,767,997	-				-1.1
1,767,997	-				-0.0
1,767,997	-				-1.0
1,767,997	-				+1.0
1,768,072	+				-0.5
1,768,072	+				+0.4
1,768,072	+				-1.0
1,768,072	+				+1.4
1,768,072	+				-0.8
1,768,072	+				+0.6
1,768,072	+				+0.6
1,768,072	+				-0.8
1,768,072	+				-0.1
1,768,072	+				+0.2
1,768,072	+				-1.9
1,768,072	+				-1.3
1,768,072	+				-2.9
1,768,072	+				+0.1
1,768,073	-				-0.5
1,768,073	-				-3.5
1,768,073	-				-0.2
1,768,073	-				+1.2
1,768,073	-				-0.6
1,768,073	-				-2.2
1,768,086	+				+0.4
1,768,086	+				-0.7
1,768,086	+				+0.2
1,768,086	+				-0.3
1,768,087	-				-3.0
1,768,087	-				-1.0
1,768,114	+				-2.2
1,768,114	+				+0.2
1,768,115	-				-1.9
1,768,115	-				-1.2
1,768,115	-				-0.1
1,768,115	-				+0.5
1,768,115	-				+0.4
1,768,115	-				-0.6
1,768,115	-				-1.4
1,768,123	+				-2.2
1,768,123	+				-1.6
1,768,123	+				-1.2
1,768,123	+				-0.4
1,768,124	-				-0.2
1,768,124	-				-0.2
1,768,138	+				+0.9
1,768,138	+				+0.4
1,768,138	+				-1.6
1,768,139	-				-0.8
1,768,139	-				-2.2
1,768,139	-				-0.4
1,768,139	-				-1.6
1,768,139	-				+0.3
1,768,316	-		AO353_08020	0.22	-1.8
1,768,392	+		AO353_08020	0.29	-0.3
1,768,392	+		AO353_08020	0.29	+0.1
1,768,393	-		AO353_08020	0.29	-0.1
1,768,393	-		AO353_08020	0.29	+0.1
1,768,393	-		AO353_08020	0.29	+1.1
1,768,393	-		AO353_08020	0.29	-1.2
1,768,475	-		AO353_08020	0.37	-1.1
1,768,520	+		AO353_08020	0.41	-1.4
1,768,520	+		AO353_08020	0.41	-1.2
1,768,520	+		AO353_08020	0.41	-1.2
1,768,520	+		AO353_08020	0.41	+0.1
1,768,520	+		AO353_08020	0.41	-1.6
1,768,520	+		AO353_08020	0.41	+1.9
1,768,521	-		AO353_08020	0.41	-0.5
1,768,521	-		AO353_08020	0.41	-0.3
1,768,660	+		AO353_08020	0.54	-0.5
1,768,660	+		AO353_08020	0.54	-0.7
1,768,660	+		AO353_08020	0.54	-1.0
1,768,660	+		AO353_08020	0.54	-0.8
1,768,661	-		AO353_08020	0.54	-0.4
1,768,661	-		AO353_08020	0.54	-0.3
1,768,661	-		AO353_08020	0.54	-1.1
1,768,661	-		AO353_08020	0.54	+0.6
1,768,661	-		AO353_08020	0.54	-0.7
1,768,661	-		AO353_08020	0.54	+0.4
1,768,661	-		AO353_08020	0.54	-1.6
1,768,663	-		AO353_08020	0.54	-0.6
1,768,663	-		AO353_08020	0.54	+0.4
1,768,663	-		AO353_08020	0.54	-1.2
1,768,663	-		AO353_08020	0.54	-0.9
1,768,741	+		AO353_08020	0.61	-2.5
1,768,741	+		AO353_08020	0.61	-0.7
1,768,741	+		AO353_08020	0.61	+0.8
1,768,741	+		AO353_08020	0.61	-0.5
1,768,742	-		AO353_08020	0.62	-1.4
1,768,890	+		AO353_08020	0.75	+0.4
1,768,890	+		AO353_08020	0.75	-1.4
1,768,948	+		AO353_08020	0.81	-2.1
1,768,949	-		AO353_08020	0.81	-0.2
1,768,949	-		AO353_08020	0.81	-0.4
1,769,125	+				-0.4
1,769,125	+				-1.5
1,769,125	+				+0.5
1,769,125	+				-0.7
1,769,125	+				+0.6
1,769,125	+				-0.2
1,769,126	-				-2.4
1,769,126	-				+0.8
1,769,126	-				-1.7
1,769,126	-				-1.2
1,769,126	-				-1.2
1,769,126	-				-1.1
1,769,126	-				-0.1
1,769,126	-				+0.6
1,769,126	-				+0.0
1,769,126	-				-0.4
1,769,126	-				+0.2
1,769,126	-				-0.6
1,769,126	-				+0.3
1,769,178	+				-0.7
1,769,178	+				+0.2
1,769,178	+				-0.7
1,769,178	+				+0.4
1,769,179	-				-1.4
1,769,182	+				-0.2
1,769,182	+				+0.4
1,769,182	+				+0.7
1,769,182	+				-0.6
1,769,182	+				-1.5
1,769,182	+				-0.4
1,769,182	+				+0.2
1,769,182	+				+1.3
1,769,183	-				-1.2
1,769,183	-				-1.9
1,769,183	-				-1.9
1,769,202	+				-1.5
1,769,202	+				-0.3
1,769,203	-				-0.1
1,769,203	-				-1.7
1,769,317	-		AO353_08025	0.13	+0.2
1,769,317	-		AO353_08025	0.13	-1.6
1,769,317	-		AO353_08025	0.13	+1.0
1,769,322	+		AO353_08025	0.13	-0.4
1,769,356	-		AO353_08025	0.17	+0.2
1,769,471	+		AO353_08025	0.31	+1.0
1,769,509	-		AO353_08025	0.36	-1.9
1,769,550	+		AO353_08025	0.41	+0.9
1,769,550	+		AO353_08025	0.41	-1.1
1,769,550	+		AO353_08025	0.41	+0.4
1,769,550	+		AO353_08025	0.41	-1.2
1,769,550	+		AO353_08025	0.41	-0.5
1,769,550	+		AO353_08025	0.41	+0.6
1,769,551	-		AO353_08025	0.41	-1.7
1,769,551	-		AO353_08025	0.41	-0.1
1,769,551	-		AO353_08025	0.41	+1.2
1,769,551	-		AO353_08025	0.41	+0.3
1,769,551	-		AO353_08025	0.41	+0.8
1,769,626	-		AO353_08025	0.50	+1.9
1,769,631	+		AO353_08025	0.51	-2.5
1,769,631	+		AO353_08025	0.51	-0.6
1,769,631	+		AO353_08025	0.51	+0.0
1,769,631	+		AO353_08025	0.51	-0.2
1,769,631	+		AO353_08025	0.51	-2.2
1,769,631	+		AO353_08025	0.51	-0.2
1,769,631	+		AO353_08025	0.51	+1.2
1,769,632	-		AO353_08025	0.51	+0.8
1,769,632	-		AO353_08025	0.51	+1.2
1,769,632	-		AO353_08025	0.51	-3.1
1,769,632	-		AO353_08025	0.51	+0.7
1,769,632	-		AO353_08025	0.51	-0.1
1,769,632	-		AO353_08025	0.51	+0.7
1,769,916	+		AO353_08025	0.86	-0.7
1,769,917	-		AO353_08025	0.86	+0.6
1,769,937	+		AO353_08025	0.89	+0.6
1,770,039	+				-0.7
1,770,039	+				-0.6
1,770,039	+				-0.0
1,770,040	-				+1.1
1,770,040	-				+1.3
1,770,040	-				+0.4
1,770,041	+				-2.1
1,770,041	+				+0.5
1,770,041	+				-0.3
1,770,041	+				+0.8
1,770,042	-				+1.8
1,770,042	-				+0.9
1,770,042	-				+0.6
1,770,064	+				-0.7
1,770,064	+				+0.0
1,770,088	+				-0.1
1,770,089	-				+0.1
1,770,089	-				-0.3
1,770,089	-				+1.9
1,770,089	-				+0.8
1,770,107	+				+0.9
1,770,107	+				+0.2
1,770,107	+				-1.0
1,770,107	+				+0.8
1,770,107	+				-0.8
1,770,107	+				+0.0
1,770,108	-				+0.2
1,770,108	-				-0.8
1,770,108	-				+2.0
1,770,108	-				-0.4
1,770,108	-				+1.3
1,770,135	+				-0.4
1,770,135	+				-0.1
1,770,135	+				+0.8