Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07575

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
1,668,785	+		AO353_07570	0.66	-0.9
1,668,785	+		AO353_07570	0.66	+1.1
1,668,785	+		AO353_07570	0.66	-0.6
1,668,785	+		AO353_07570	0.66	-0.2
1,668,785	+		AO353_07570	0.66	+1.2
1,668,785	+		AO353_07570	0.66	-1.1
1,668,786	-		AO353_07570	0.66	-0.6
1,668,786	-		AO353_07570	0.66	-0.0
1,668,803	+		AO353_07570	0.67	-1.4
1,668,803	+		AO353_07570	0.67	+0.2
1,668,804	-		AO353_07570	0.67	-0.2
1,668,804	-		AO353_07570	0.67	-0.5
1,668,804	-		AO353_07570	0.67	+0.2
1,668,912	+		AO353_07570	0.73	+0.2
1,668,912	+		AO353_07570	0.73	-1.4
1,668,913	-		AO353_07570	0.73	-0.4
1,668,913	-		AO353_07570	0.73	+1.4
1,668,913	-		AO353_07570	0.73	+1.2
1,669,072	+		AO353_07570	0.81	+0.0
1,669,073	-		AO353_07570	0.81	+1.6
1,669,073	-		AO353_07570	0.81	+0.4
1,669,184	+		AO353_07570	0.87	-0.6
1,669,185	-		AO353_07570	0.87	+1.6
1,669,248	+				-1.3
1,669,248	+				-0.1
1,669,248	+				-0.1
1,669,248	+				-1.1
1,669,249	-				-0.9
1,669,249	-				-0.8
1,669,260	+				+0.4
1,669,260	+				+1.0
1,669,260	+				-1.3
1,669,260	+				-0.6
1,669,260	+				-0.8
1,669,260	+				-0.5
1,669,261	-				-1.8
1,669,261	-				-0.1
1,669,261	-				+0.8
1,669,324	-				-3.3
1,669,435	+				-2.8
1,669,436	-				+0.6
1,669,436	-				-1.3
1,669,436	-				-0.6
1,669,436	-				-1.8
1,669,436	-				-2.3
1,669,436	-				-1.7
1,669,436	-				-0.1
1,669,677	+		AO353_07575	0.34	+1.2
1,669,677	+		AO353_07575	0.34	-0.6
1,669,677	+		AO353_07575	0.34	-0.6
1,669,678	-		AO353_07575	0.34	-0.8
1,669,678	-		AO353_07575	0.34	+0.5
1,669,705	+		AO353_07575	0.38	+0.0
1,669,705	+		AO353_07575	0.38	-0.5
1,669,713	+		AO353_07575	0.39	-1.0
1,669,713	+		AO353_07575	0.39	-0.2
1,669,713	+		AO353_07575	0.39	-1.4
1,669,713	+		AO353_07575	0.39	+0.2
1,669,714	-		AO353_07575	0.39	-0.9
1,669,714	-		AO353_07575	0.39	-2.0
1,669,714	-		AO353_07575	0.39	-0.6
1,669,714	-		AO353_07575	0.39	-0.8
1,669,714	-		AO353_07575	0.39	+0.9
1,669,714	-		AO353_07575	0.39	-0.1
1,669,999	+		AO353_07575	0.80	-0.5
1,670,034	+		AO353_07575	0.84	+0.6
1,670,034	+		AO353_07575	0.84	-0.1
1,670,034	+		AO353_07575	0.84	+0.2
1,670,034	+		AO353_07575	0.84	-0.1
1,670,035	-		AO353_07575	0.85	+0.4
1,670,035	-		AO353_07575	0.85	-0.4
1,670,035	-		AO353_07575	0.85	+0.0
1,670,035	-		AO353_07575	0.85	+0.2
1,670,035	-		AO353_07575	0.85	-0.3
1,670,035	-		AO353_07575	0.85	-0.3
1,670,035	-		AO353_07575	0.85	-0.2
1,670,141	+				+1.2
1,670,141	+				-0.4
1,670,142	-				+3.2
1,670,142	-				+2.2
1,670,142	-				+2.4
1,670,142	-				+0.7
1,670,142	-				-1.8
1,670,189	+				-0.1
1,670,189	+				-0.4
1,670,189	+				-1.1
1,670,189	+				-0.3
1,670,189	+				+0.9
1,670,190	-				-0.9
1,670,211	-				-1.5
1,670,253	+				+0.4
1,670,253	+				+0.5
1,670,254	-				-1.1
1,670,254	-				+0.2
1,670,280	+				+1.7
1,670,280	+				+1.5
1,670,280	+				+0.6
1,670,280	+				-1.4
1,670,280	+				-1.3
1,670,280	+				+2.1
1,670,281	-				+0.6
1,670,281	-				+1.3
1,670,281	-				+0.7
1,670,281	-				-0.6
1,670,281	-				-0.1
1,670,281	-				-0.1
1,670,281	-				+0.7
1,670,283	+				-0.3
1,670,283	+				+1.6
1,670,283	+				+0.7
1,670,283	+				+1.5
1,670,283	+				-0.5
1,670,283	+				-1.0
1,670,283	+				-1.7
1,670,284	-				+1.6
1,670,284	-				+0.1
1,670,284	-				+0.3
1,670,284	-				+0.1
1,670,284	-				-0.5
1,670,288	+				+0.3
1,670,288	+				-0.1
1,670,288	+				+1.0
1,670,288	+				+1.2
1,670,289	-				-0.6
1,670,289	-				+1.1
1,670,289	-				+1.2
1,670,314	+				+0.3
1,670,315	-				+0.4
1,670,315	-				+1.2
1,670,315	-				+0.7
1,670,315	-				+1.2
1,670,377	+				-0.1
1,670,377	+				-1.4
1,670,378	-				+1.1
1,670,378	-				-0.2
1,670,378	-				-0.3
1,670,378	-				+1.6
1,670,378	-				+0.3
1,670,378	-				-1.8
1,670,378	-				+1.4
1,670,378	-				+1.7
1,670,537	+		AO353_07580	0.33	+0.2
1,670,537	+		AO353_07580	0.33	+0.0
1,670,539	+		AO353_07580	0.33	-0.7
1,670,539	+		AO353_07580	0.33	+0.3
1,670,539	+		AO353_07580	0.33	-1.3
1,670,539	+		AO353_07580	0.33	-0.6
1,670,540	-		AO353_07580	0.33	+1.2
1,670,540	-		AO353_07580	0.33	-1.3
1,670,540	-		AO353_07580	0.33	+0.9
1,670,540	-		AO353_07580	0.33	+0.0
1,670,540	-		AO353_07580	0.33	+0.6
1,670,540	-		AO353_07580	0.33	-1.4
1,670,540	-		AO353_07580	0.33	-1.5
1,670,540	-		AO353_07580	0.33	-0.2
1,670,563	+		AO353_07580	0.37	+0.2
1,670,564	-		AO353_07580	0.37	-1.1
1,670,845	+		AO353_07580	0.81	-1.0
1,670,845	+		AO353_07580	0.81	+0.6
1,670,908	+				+1.0
1,670,908	+				+0.3
1,670,908	+				-1.1
1,670,918	+				-0.8
1,670,918	+				+0.2
1,670,918	+				+1.3
1,670,918	+				+0.1
1,670,919	-				+1.2
1,670,919	-				-0.2
1,670,959	+				+0.5
1,670,959	+				-1.5
1,670,959	+				-1.0
1,670,960	-				+0.7
1,671,022	+				-0.6
1,671,023	-				-1.9
1,671,091	+				-0.6
1,671,091	+				+0.2
1,671,091	+				-0.6
1,671,091	+				+0.3
1,671,091	+				-1.1
1,671,091	+				-1.4
1,671,092	-				-1.5
1,671,092	-				-1.9
1,671,092	-				-0.6
1,671,092	-				+1.3
1,671,092	-				-1.0
1,671,092	-				-1.7
1,671,097	+				-1.3
1,671,097	+				+0.4
1,671,097	+				+0.6
1,671,097	+				-0.4
1,671,097	+				-1.3
1,671,097	+				+1.1
1,671,097	+				+0.6
1,671,097	+				+0.6
1,671,097	+				-0.4
1,671,097	+				-1.3
1,671,097	+				+0.6
1,671,097	+				-0.1
1,671,097	+				+0.3
1,671,098	-				-1.0
1,671,098	-				-0.4
1,671,098	-				-0.8
1,671,098	-				-0.5
1,671,098	-				+0.0
1,671,098	-				-1.2
1,671,098	-				+3.0
1,671,098	-				+0.6
1,671,098	-				+1.0
1,671,098	-				+0.0
1,671,098	-				-1.7
1,671,098	-				-0.1
1,671,098	-				+2.0
1,671,098	-				+0.1
1,671,098	-				-1.2
1,671,098	-				-0.7
1,671,098	-				+2.2