Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_06375

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
1,420,484	+		AO353_06365	0.36	+1.6
1,420,485	-		AO353_06365	0.36	+0.6
1,420,502	+		AO353_06365	0.39	+4.4
1,420,502	+		AO353_06365	0.39	+1.2
1,420,502	+		AO353_06365	0.39	+2.3
1,420,502	+		AO353_06365	0.39	+2.2
1,420,502	+		AO353_06365	0.39	+1.9
1,420,502	+		AO353_06365	0.39	+0.3
1,420,502	+		AO353_06365	0.39	+2.0
1,420,502	+		AO353_06365	0.39	+1.3
1,420,503	-		AO353_06365	0.39	+2.1
1,420,503	-		AO353_06365	0.39	+1.2
1,420,503	-		AO353_06365	0.39	+1.4
1,420,503	-		AO353_06365	0.39	+1.8
1,420,503	-		AO353_06365	0.39	+2.9
1,420,503	-		AO353_06365	0.39	-0.2
1,420,503	-		AO353_06365	0.39	+2.2
1,420,503	-		AO353_06365	0.39	+0.4
1,420,503	-		AO353_06365	0.39	+3.2
1,420,505	+		AO353_06365	0.39	+1.6
1,420,505	+		AO353_06365	0.39	+1.6
1,420,505	+		AO353_06365	0.39	+1.8
1,420,505	+		AO353_06365	0.39	+1.7
1,420,505	+		AO353_06365	0.39	+1.5
1,420,505	+		AO353_06365	0.39	+1.9
1,420,505	+		AO353_06365	0.39	+1.1
1,420,506	-		AO353_06365	0.40	+1.7
1,420,506	-		AO353_06365	0.40	+3.3
1,420,506	-		AO353_06365	0.40	+1.4
1,420,550	+		AO353_06365	0.48	+1.1
1,420,550	+		AO353_06365	0.48	+1.6
1,420,551	-		AO353_06365	0.48	+1.2
1,420,551	-		AO353_06365	0.48	+2.6
1,420,551	-		AO353_06365	0.48	+0.4
1,420,652	+		AO353_06365	0.66	+1.2
1,420,652	+		AO353_06365	0.66	+2.3
1,420,652	+		AO353_06365	0.66	+1.8
1,420,652	+		AO353_06365	0.66	+1.9
1,420,652	+		AO353_06365	0.66	+2.6
1,420,652	+		AO353_06365	0.66	+1.8
1,420,652	+		AO353_06365	0.66	+2.3
1,420,652	+		AO353_06365	0.66	+2.0
1,420,652	+		AO353_06365	0.66	+2.2
1,420,652	+		AO353_06365	0.66	+1.5
1,420,652	+		AO353_06365	0.66	+1.7
1,420,652	+		AO353_06365	0.66	+0.7
1,420,653	-		AO353_06365	0.66	+0.8
1,420,653	-		AO353_06365	0.66	+1.9
1,420,653	-		AO353_06365	0.66	+0.8
1,420,653	-		AO353_06365	0.66	+0.7
1,420,653	-		AO353_06365	0.66	+1.0
1,420,653	-		AO353_06365	0.66	+1.7
1,420,653	-		AO353_06365	0.66	+2.9
1,420,653	-		AO353_06365	0.66	+1.4
1,420,653	-		AO353_06365	0.66	+1.4
1,420,653	-		AO353_06365	0.66	+1.1
1,420,654	+		AO353_06365	0.66	+1.7
1,420,654	+		AO353_06365	0.66	+0.5
1,420,654	+		AO353_06365	0.66	+2.5
1,420,654	+		AO353_06365	0.66	+2.6
1,420,654	+		AO353_06365	0.66	+0.2
1,420,654	+		AO353_06365	0.66	+1.6
1,420,654	+		AO353_06365	0.66	+0.2
1,420,654	+		AO353_06365	0.66	+0.2
1,420,654	+		AO353_06365	0.66	+2.1
1,420,654	+		AO353_06365	0.66	+3.1
1,420,654	+		AO353_06365	0.66	+0.3
1,420,654	+		AO353_06365	0.66	+3.5
1,420,654	+		AO353_06365	0.66	+3.0
1,420,654	+		AO353_06365	0.66	+1.4
1,420,654	+		AO353_06365	0.66	+1.5
1,420,654	+		AO353_06365	0.66	+1.6
1,420,654	+		AO353_06365	0.66	+2.2
1,420,654	+		AO353_06365	0.66	+0.3
1,420,654	+		AO353_06365	0.66	-0.2
1,420,655	-		AO353_06365	0.66	+0.8
1,420,655	-		AO353_06365	0.66	+1.6
1,420,655	-		AO353_06365	0.66	+3.1
1,420,655	-		AO353_06365	0.66	+2.2
1,420,655	-		AO353_06365	0.66	+1.7
1,420,655	-		AO353_06365	0.66	+1.5
1,420,655	-		AO353_06365	0.66	+0.5
1,420,655	-		AO353_06365	0.66	+1.8
1,420,655	-		AO353_06365	0.66	+1.7
1,420,655	-		AO353_06365	0.66	+1.4
1,420,655	-		AO353_06365	0.66	+2.1
1,420,655	-		AO353_06365	0.66	+2.1
1,420,655	-		AO353_06365	0.66	+1.6
1,420,655	-		AO353_06365	0.66	+0.4
1,420,655	-		AO353_06365	0.66	+1.7
1,420,655	-		AO353_06365	0.66	+2.5
1,420,655	-		AO353_06365	0.66	+1.2
1,420,655	-		AO353_06365	0.66	+2.1
1,420,655	-		AO353_06365	0.66	+2.9
1,420,655	-		AO353_06365	0.66	+2.4
1,420,781	-		AO353_06365	0.89	-1.3
1,420,784	+				+0.5
1,420,784	+		AO353_06365	0.90	-0.4
1,420,784	+		AO353_06365	0.90	-0.9
1,420,784	+		AO353_06365	0.90	-0.9
1,420,784	+		AO353_06365	0.90	-1.4
1,420,784	+		AO353_06365	0.90	-0.9
1,420,784	+		AO353_06365	0.90	+0.1
1,420,785	-				-1.5
1,420,785	-				+0.7
1,420,785	-				-1.1
1,420,785	-				+0.7
1,420,785	-				-1.4
1,420,785	-				+0.1
1,420,816	+				+1.1
1,420,816	+				-0.6
1,420,833	+				+0.5
1,420,910	+				-0.7
1,420,996	+				-1.0
1,420,996	+				+0.5
1,420,996	+				+1.2
1,420,996	+				-0.5
1,420,996	+				+0.7
1,420,996	+				+1.0
1,420,996	+				+0.5
1,420,996	+				+0.1
1,420,996	+				+0.8
1,420,996	+				-0.1
1,420,996	+				+0.4
1,420,996	+				-0.6
1,420,997	-				+1.5
1,420,997	-				-0.3
1,420,997	-				+2.6
1,420,997	-				+0.3
1,420,997	-				-2.0
1,420,997	-				+0.7
1,420,997	-				+0.1
1,420,997	-				-0.0
1,420,997	-				-1.4
1,420,997	-				+0.2
1,420,997	-				+0.6
1,420,997	-				-0.1
1,420,997	-				+0.1
1,420,997	-				-0.3
1,421,076	-		AO353_06370	0.25	-0.2
1,421,123	+		AO353_06370	0.39	+0.3
1,421,123	+		AO353_06370	0.39	-2.4
1,421,124	-		AO353_06370	0.39	+1.3
1,421,124	-		AO353_06370	0.39	-0.4
1,421,124	-		AO353_06370	0.39	+0.4
1,421,124	-		AO353_06370	0.39	-0.6
1,421,242	+		AO353_06370	0.75	+2.1
1,421,242	+		AO353_06370	0.75	+0.3
1,421,242	+		AO353_06370	0.75	-0.4
1,421,242	+		AO353_06370	0.75	-0.8
1,421,242	+		AO353_06370	0.75	+0.8
1,421,242	+		AO353_06370	0.75	+0.4
1,421,242	+		AO353_06370	0.75	+1.2
1,421,243	-		AO353_06370	0.75	-0.7
1,421,243	-		AO353_06370	0.75	-0.3
1,421,243	-		AO353_06370	0.75	-0.3
1,421,243	-		AO353_06370	0.75	+0.6
1,421,243	-		AO353_06370	0.75	+1.6
1,421,243	-		AO353_06370	0.75	-1.3
1,421,243	-		AO353_06370	0.75	-1.4
1,421,243	-		AO353_06370	0.75	-0.2
1,421,243	-		AO353_06370	0.75	-1.4
1,421,243	-		AO353_06370	0.75	+1.1
1,421,257	+		AO353_06370	0.79	-0.8
1,421,257	+		AO353_06370	0.79	-0.2
1,421,257	+		AO353_06370	0.79	+0.6
1,421,258	-		AO353_06370	0.80	-0.1
1,421,258	-		AO353_06370	0.80	+0.2
1,421,299	+				+0.8
1,421,299	+				-1.2
1,421,299	+				+0.8
1,421,299	+				+1.6
1,421,299	+				+1.1
1,421,299	+				+0.2
1,421,299	+				-1.9
1,421,299	+				-0.3
1,421,299	+				+1.3
1,421,299	+				+0.2
1,421,299	+				+0.2
1,421,300	-				-0.0
1,421,300	-				-0.7
1,421,300	-				-0.7
1,421,300	-				+2.1
1,421,300	-				+0.7
1,421,351	-				+0.1
1,421,369	+				+0.6
1,421,369	+				-0.9
1,421,369	+				+0.6
1,421,369	+				+2.1
1,421,369	+				+0.4
1,421,369	+				-2.2
1,421,369	+				+0.5
1,421,369	+				-0.4
1,421,370	-				-1.8
1,421,370	-				-0.7
1,421,370	-				+0.0
1,421,370	-				-0.1
1,421,370	-				+0.8
1,421,370	-				+0.4
1,421,370	-				+0.3
1,421,370	-				+0.1
1,421,370	-				+0.3
1,421,370	-				+0.2
1,421,370	-				-2.4
1,421,370	-				-0.2
1,421,370	-				+0.8
1,421,370	-				+0.5
1,421,371	+				-0.7
1,421,371	+				-0.1
1,421,371	+				+1.5
1,421,371	+				-0.1
1,421,371	+				+0.2
1,421,371	+				-1.0
1,421,371	+				+1.2
1,421,371	+				+0.9
1,421,371	+				-0.5
1,421,371	+				+0.3
1,421,371	+				+1.7
1,421,371	+				+0.1
1,421,371	+				+1.9
1,421,372	-				+1.7
1,421,372	-				-0.1
1,421,372	-				+0.1
1,421,372	-				+0.4
1,421,372	-				-2.3
1,421,372	-				-1.4
1,421,372	-				-1.4
1,421,372	-				+0.8
1,421,372	-				+1.7
1,421,372	-				+1.6
1,421,372	-				+0.8
1,421,372	-				+0.7
1,421,372	-				+0.1
1,421,376	+				+0.6
1,421,376	+				-0.3
1,421,377	-				+2.3
1,421,397	+				+1.2
1,421,397	+				-0.7
1,421,420	+				+0.9
1,421,420	+				+0.1
1,421,420	+				+0.6
1,421,420	+				+0.9
1,421,420	+				-0.7
1,421,420	+				+0.1
1,421,420	+				-0.1
1,421,420	+				+0.7
1,421,420	+				+1.0
1,421,420	+				+0.4
1,421,421	-				-0.2
1,421,421	-				+1.1
1,421,421	-				+1.2
1,421,421	-				+0.5
1,421,421	-				+1.8
1,421,422	+				+0.4
1,421,422	+				-1.4
1,421,422	+				+1.0
1,421,422	+				+0.0
1,421,423	-				+0.9
1,421,423	-				+1.8
1,421,423	-				+1.8
1,421,475	+				-0.9
1,421,475	+				+0.3
1,421,475	+				+0.6
1,421,475	+				-0.7
1,421,475	+				+0.7
1,421,475	+				+2.1
1,421,475	+				+0.2
1,421,475	+				+0.2
1,421,476	-				-0.6
1,421,476	-				+2.3
1,421,476	-				+2.0
1,421,476	-				-1.2
1,421,476	-				-0.8
1,421,476	-				+1.8
1,421,476	-				+1.4
1,421,508	+				+0.3
1,421,509	-				+1.5
1,421,637	+		AO353_06375	0.13	-1.4
1,421,637	+		AO353_06375	0.13	+0.7
1,421,638	-		AO353_06375	0.13	-0.2
1,421,638	-		AO353_06375	0.13	+3.3
1,421,638	-		AO353_06375	0.13	-0.6
1,421,638	-		AO353_06375	0.13	-1.5
1,421,751	+		AO353_06375	0.22	+0.1
1,421,751	+		AO353_06375	0.22	+1.3
1,421,751	+		AO353_06375	0.22	+1.4
1,421,751	+		AO353_06375	0.22	+3.0
1,421,751	+		AO353_06375	0.22	+1.1
1,421,751	+		AO353_06375	0.22	-1.0
1,421,752	-		AO353_06375	0.22	+1.1
1,421,752	-		AO353_06375	0.22	+0.5
1,421,752	-		AO353_06375	0.22	+1.2
1,421,752	-		AO353_06375	0.22	+2.1
1,421,907	+		AO353_06375	0.33	+0.8
1,421,907	+		AO353_06375	0.33	-0.5
1,421,907	+		AO353_06375	0.33	+0.6
1,421,907	+		AO353_06375	0.33	+1.1
1,421,907	+		AO353_06375	0.33	+1.0
1,421,907	+		AO353_06375	0.33	+0.9
1,421,907	+		AO353_06375	0.33	+0.9
1,421,908	-		AO353_06375	0.34	+1.8
1,421,908	-		AO353_06375	0.34	+1.0
1,421,908	-		AO353_06375	0.34	+0.8
1,421,908	-		AO353_06375	0.34	+1.1
1,421,908	-		AO353_06375	0.34	+2.1
1,421,908	-		AO353_06375	0.34	+1.5
1,421,908	-		AO353_06375	0.34	-0.5
1,421,908	-		AO353_06375	0.34	+0.4
1,421,911	+		AO353_06375	0.34	+1.8
1,421,911	+		AO353_06375	0.34	-0.7
1,421,911	+		AO353_06375	0.34	-0.5
1,421,911	+		AO353_06375	0.34	+1.6
1,421,911	+		AO353_06375	0.34	+2.8
1,421,911	+		AO353_06375	0.34	+1.4
1,421,911	+		AO353_06375	0.34	+0.5
1,421,911	+		AO353_06375	0.34	+0.3
1,421,912	-		AO353_06375	0.34	-0.3
1,421,912	-		AO353_06375	0.34	+1.3
1,421,912	-		AO353_06375	0.34	+1.8
1,421,912	-		AO353_06375	0.34	+1.2
1,421,912	-		AO353_06375	0.34	+1.9
1,421,912	-		AO353_06375	0.34	+1.2
1,421,912	-		AO353_06375	0.34	+1.0
1,421,937	+		AO353_06375	0.36	+0.3
1,421,937	+		AO353_06375	0.36	+1.3
1,421,938	-		AO353_06375	0.36	+0.1
1,421,938	-		AO353_06375	0.36	+1.2
1,421,938	-		AO353_06375	0.36	-0.6
1,421,938	-		AO353_06375	0.36	+1.6
1,421,938	-		AO353_06375	0.36	+0.7
1,421,953	+		AO353_06375	0.37	+1.5
1,421,954	-		AO353_06375	0.37	+1.0
1,421,961	+		AO353_06375	0.38	+1.3
1,421,961	+		AO353_06375	0.38	+0.4
1,421,961	+		AO353_06375	0.38	+0.5
1,421,961	+		AO353_06375	0.38	+2.1
1,421,961	+		AO353_06375	0.38	-0.7
1,421,962	-		AO353_06375	0.38	+1.5
1,421,962	-		AO353_06375	0.38	+0.2
1,421,962	-		AO353_06375	0.38	+0.5
1,421,963	+		AO353_06375	0.38	-0.2
1,421,963	+		AO353_06375	0.38	+0.2
1,422,159	-		AO353_06375	0.52	-0.7
1,422,223	+		AO353_06375	0.57	+1.0
1,422,223	+		AO353_06375	0.57	+1.7
1,422,224	-		AO353_06375	0.57	+1.3
1,422,315	+		AO353_06375	0.64	+0.3
1,422,315	+		AO353_06375	0.64	+1.4
1,422,315	+		AO353_06375	0.64	+0.1
1,422,315	+		AO353_06375	0.64	+1.7
1,422,316	-		AO353_06375	0.64	-0.5
1,422,316	-		AO353_06375	0.64	+1.0
1,422,316	-		AO353_06375	0.64	-0.9
1,422,316	-		AO353_06375	0.64	-1.1
1,422,316	-		AO353_06375	0.64	-0.5
1,422,316	-		AO353_06375	0.64	+1.5
1,422,316	-		AO353_06375	0.64	-1.2
1,422,316	-		AO353_06375	0.64	+0.8
1,422,316	-		AO353_06375	0.64	+2.0
1,422,316	-		AO353_06375	0.64	+0.9
1,422,316	-		AO353_06375	0.64	+1.2
1,422,378	-		AO353_06375	0.69	+0.8
1,422,460	-		AO353_06375	0.75	+1.4
1,422,678	-				+0.0
1,422,688	+				+0.9
1,422,688	+				+0.1
1,422,689	-				+1.4
1,422,689	-				+0.2
1,422,766	+				-0.7
1,422,792	+				-0.1
1,422,793	-				+0.5
1,422,793	-				+0.8
1,422,793	-				+0.3
1,422,874	+				+0.3
1,422,875	-				-0.4
1,422,891	+				+0.1
1,422,979	+				+0.6
1,422,979	+				-0.2
1,422,979	+				+0.4
1,423,020	+				+0.6
1,423,020	+				-0.2
1,423,067	+				-0.6
1,423,420	+		AO353_06380	0.36	-0.1
1,423,420	+		AO353_06380	0.36	-1.1
1,423,420	+		AO353_06380	0.36	+1.1
1,423,420	+		AO353_06380	0.36	+0.8
1,423,486	+		AO353_06380	0.42	-0.9
1,423,486	+		AO353_06380	0.42	+0.5
1,423,486	+		AO353_06380	0.42	+0.7
1,423,486	+		AO353_06380	0.42	+0.1
1,423,486	+		AO353_06380	0.42	-1.0
1,423,486	+		AO353_06380	0.42	+0.2
1,423,486	+		AO353_06380	0.42	-0.5
1,423,486	+		AO353_06380	0.42	+1.1
1,423,486	+		AO353_06380	0.42	-0.2
1,423,550	+		AO353_06380	0.49	+1.0
1,423,636	+		AO353_06380	0.57	+0.4
1,423,636	+		AO353_06380	0.57	-0.9
1,423,720	+		AO353_06380	0.65	+0.4
1,423,720	+		AO353_06380	0.65	+2.9
1,423,720	+		AO353_06380	0.65	-1.6
1,423,720	+		AO353_06380	0.65	+1.0
1,423,720	+		AO353_06380	0.65	+0.6
1,423,720	+		AO353_06380	0.65	-1.1
1,423,720	+		AO353_06380	0.65	+0.7