Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05660

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
1,250,750	-				-1.8
1,250,766	-				+0.1
1,250,766	-				+1.8
1,250,766	-				+0.1
1,250,766	-				+0.0
1,250,766	-				-0.2
1,250,781	-				+0.2
1,250,781	-				-0.4
1,250,781	-				-1.3
1,250,781	-				+1.3
1,250,781	-				+0.4
1,250,781	-				+0.3
1,250,781	-				-1.1
1,250,781	-				+2.7
1,250,781	-				+0.3
1,251,424	-				+0.9
1,251,424	-				+3.3
1,251,424	-				+0.1
1,251,426	-				+1.5
1,251,473	+				+0.2
1,251,473	+				-1.1
1,251,476	+				-0.1
1,251,476	+				+0.1
1,251,477	-				-0.6
1,251,477	-				+1.1
1,251,477	-				+0.5
1,251,477	-				+1.3
1,251,498	+				+1.5
1,251,498	+				+0.0
1,251,498	+				+0.7
1,251,498	+				-1.1
1,251,498	+				-1.5
1,251,498	+				-0.1
1,251,498	+				+1.4
1,251,498	+				+1.7
1,251,498	+				+1.1
1,251,498	+				+0.5
1,251,499	-				+0.1
1,251,499	-				-2.5
1,251,499	-				-3.4
1,251,499	-				-0.2
1,251,499	-				+2.1
1,251,499	-				-2.7
1,251,499	-				-1.6
1,251,499	-				+0.2
1,251,499	-				-0.3
1,251,499	-				-0.1
1,251,499	-				+1.1
1,251,499	-				-1.8
1,251,499	-				-0.4
1,251,499	-				-2.9
1,251,499	-				-0.3
1,251,499	-				+0.3
1,251,499	-				-0.6
1,251,499	-				-0.4
1,251,516	-				+1.3
1,251,546	+				+1.2
1,251,584	+				+0.6
1,251,618	+				+1.0
1,251,618	+				+0.5
1,251,618	+				-0.5
1,251,618	+				-1.5
1,251,618	+				+0.2
1,251,618	+				-0.1
1,251,618	+				+0.5
1,251,618	+				+0.1
1,251,618	+				-1.1
1,251,618	+				+0.1
1,251,619	-				+2.1
1,251,619	-				-0.4
1,251,619	-				+0.5
1,251,619	-				-0.4
1,251,619	-				-2.8
1,251,619	-				+0.1
1,251,619	-				+0.1
1,251,638	+				-1.1
1,251,638	+				+0.1
1,251,638	+				+0.2
1,251,638	+				+0.7
1,251,639	-				+0.4
1,251,639	-				-0.5
1,251,639	-				-1.4
1,251,642	+				+1.0
1,251,642	+				+0.4
1,251,642	+				+2.3
1,251,642	+				+1.1
1,251,642	+				+2.6
1,251,642	+				+1.1
1,251,642	+				+1.7
1,251,642	+				-1.5
1,251,642	+				+0.6
1,251,642	+				-1.2
1,251,642	+				+0.6
1,251,642	+				+1.7
1,251,642	+				-0.6
1,251,642	+				+0.8
1,251,642	+				-1.3
1,251,642	+				+0.7
1,251,642	+				+0.2
1,251,642	+				+0.4
1,251,642	+				-0.4
1,251,642	+				-0.9
1,251,642	+				+1.1
1,251,642	+				-0.5
1,251,642	+				-1.0
1,251,642	+				-1.3
1,251,642	+				+0.1
1,251,643	-				-0.5
1,251,643	-				+0.2
1,251,643	-				+0.9
1,251,643	-				+1.6
1,251,643	-				-2.4
1,251,643	-				-0.8
1,251,643	-				-0.4
1,251,643	-				-0.5
1,251,643	-				+0.3
1,251,643	-				-0.5
1,251,643	-				-1.3
1,251,643	-				-1.9
1,251,643	-				+0.3
1,251,643	-				-0.9
1,251,643	-				-0.3
1,251,643	-				-0.1
1,251,643	-				-0.4
1,251,643	-				+0.1
1,251,646	+				+0.1
1,251,647	-				-0.5
1,251,647	-				-1.4
1,251,647	-				-0.6
1,251,647	-				-0.3
1,251,647	-				+0.6
1,251,647	-				+0.4
1,251,647	-				-1.0
1,251,849	+		AO353_05660	0.14	+1.1
1,251,849	+		AO353_05660	0.14	+0.5
1,251,849	+		AO353_05660	0.14	-0.1
1,251,849	+		AO353_05660	0.14	-0.0
1,251,849	+		AO353_05660	0.14	-0.3
1,251,850	-		AO353_05660	0.14	-0.8
1,251,850	-		AO353_05660	0.14	+0.1
1,251,934	+		AO353_05660	0.19	-2.3
1,251,934	+		AO353_05660	0.19	+0.6
1,251,934	+		AO353_05660	0.19	+1.1
1,251,934	+		AO353_05660	0.19	-0.5
1,251,935	-		AO353_05660	0.19	-0.9
1,251,969	+		AO353_05660	0.21	+3.2
1,251,969	+		AO353_05660	0.21	+1.1
1,252,063	+		AO353_05660	0.27	-0.9
1,252,064	-		AO353_05660	0.27	+1.6
1,252,064	-		AO353_05660	0.27	+0.3
1,252,192	+		AO353_05660	0.34	+2.5
1,252,192	+		AO353_05660	0.34	+0.7
1,252,192	+		AO353_05660	0.34	-0.4
1,252,343	+		AO353_05660	0.43	-0.3
1,252,343	+		AO353_05660	0.43	-0.3
1,252,343	+		AO353_05660	0.43	+0.6
1,252,343	+		AO353_05660	0.43	+1.3
1,252,343	+		AO353_05660	0.43	-1.1
1,252,343	+		AO353_05660	0.43	+0.5
1,252,344	-		AO353_05660	0.43	-1.8
1,252,344	-		AO353_05660	0.43	+0.2
1,252,344	-		AO353_05660	0.43	+0.2
1,252,344	-		AO353_05660	0.43	-1.4
1,252,344	-		AO353_05660	0.43	-0.1
1,252,543	+		AO353_05660	0.55	+0.2
1,252,543	+		AO353_05660	0.55	+2.8
1,252,543	+		AO353_05660	0.55	-1.3
1,252,543	+		AO353_05660	0.55	+0.9
1,252,544	-		AO353_05660	0.55	-0.3
1,252,544	-		AO353_05660	0.55	-2.4
1,252,544	-		AO353_05660	0.55	+0.8
1,252,544	-		AO353_05660	0.55	-0.1
1,252,544	-		AO353_05660	0.55	+1.1
1,252,808	+		AO353_05660	0.71	-2.2
1,252,808	+		AO353_05660	0.71	+1.1
1,252,808	+		AO353_05660	0.71	-1.0
1,252,808	+		AO353_05660	0.71	-0.3
1,252,808	+		AO353_05660	0.71	-0.8
1,252,808	+		AO353_05660	0.71	-0.8
1,253,106	-		AO353_05660	0.89	-1.4
1,253,106	-		AO353_05660	0.89	+1.1
1,253,106	-		AO353_05660	0.89	+1.0
1,253,106	-		AO353_05660	0.89	+1.1
1,253,106	-		AO353_05660	0.89	-0.3
1,253,106	-		AO353_05660	0.89	+0.6
1,253,106	-		AO353_05660	0.89	+0.3
1,253,129	+				+1.6
1,253,129	+				+2.4
1,253,129	+				+0.7
1,253,129	+				-0.1
1,253,129	+				-1.1
1,253,129	+				+0.3
1,253,129	+				-0.0
1,253,129	+				-0.4
1,253,129	+				+1.5
1,253,129	+				+1.3
1,253,129	+				-0.3
1,253,130	-				-0.4
1,253,130	-				+0.5
1,253,130	-				-1.9
1,253,130	-				+0.5
1,253,130	-				+0.2
1,253,130	-				-2.0
1,253,130	-				+1.1
1,253,130	-				+0.2
1,253,130	-				-0.6
1,253,130	-				-0.1
1,253,130	-				-0.4
1,253,188	-				+0.1
1,253,199	+				+2.3
1,253,200	-				+1.6
1,253,200	-				-1.3
1,253,200	-				-0.1
1,253,200	-				-1.0
1,253,369	+				+0.5
1,253,369	+				+1.1
1,253,369	+				+0.8
1,253,369	+				-0.4
1,253,370	-				-1.5
1,253,370	-				+0.4
1,253,370	-				+0.5
1,253,370	-				-2.3
1,253,370	-				-1.1
1,253,370	-				+0.4
1,253,370	-				-1.9
1,253,370	-				+1.8
1,253,370	-				-1.0