Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05060

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
1,115,168	+		AO353_05050	0.47	-1.3
1,115,168	+		AO353_05050	0.47	+0.6
1,115,169	-		AO353_05050	0.47	-0.2
1,115,169	-		AO353_05050	0.47	-1.2
1,115,270	+		AO353_05050	0.68	-1.6
1,115,270	+		AO353_05050	0.68	+1.0
1,115,270	+		AO353_05050	0.68	+0.0
1,115,270	+		AO353_05050	0.68	-0.7
1,115,270	+		AO353_05050	0.68	-1.8
1,115,270	+		AO353_05050	0.68	+1.3
1,115,270	+		AO353_05050	0.68	+0.4
1,115,270	+		AO353_05050	0.68	+0.1
1,115,270	+		AO353_05050	0.68	-3.3
1,115,270	+		AO353_05050	0.68	-0.6
1,115,270	+		AO353_05050	0.68	+1.3
1,115,270	+		AO353_05050	0.68	-0.6
1,115,270	+		AO353_05050	0.68	+0.6
1,115,270	+		AO353_05050	0.68	-1.0
1,115,270	+		AO353_05050	0.68	+0.5
1,115,271	-		AO353_05050	0.68	+0.5
1,115,271	-		AO353_05050	0.68	-0.6
1,115,271	-		AO353_05050	0.68	-1.6
1,115,271	-		AO353_05050	0.68	+1.0
1,115,271	-		AO353_05050	0.68	-1.2
1,115,271	-		AO353_05050	0.68	+0.3
1,115,271	-		AO353_05050	0.68	-0.0
1,115,271	-		AO353_05050	0.68	+0.5
1,115,271	-		AO353_05050	0.68	-0.7
1,115,271	-		AO353_05050	0.68	-1.3
1,115,271	-		AO353_05050	0.68	-0.6
1,115,301	-		AO353_05050	0.74	+1.0
1,115,301	-		AO353_05050	0.74	+0.5
1,115,301	-		AO353_05050	0.74	+1.4
1,115,301	-		AO353_05050	0.74	-0.2
1,115,301	-		AO353_05050	0.74	-1.8
1,115,374	+		AO353_05050	0.89	-0.8
1,115,374	+		AO353_05050	0.89	-0.2
1,115,375	-		AO353_05050	0.90	+0.4
1,115,375	-		AO353_05050	0.90	-0.6
1,115,403	+				-0.3
1,115,403	+				-1.0
1,115,403	+				+0.5
1,115,403	+				+1.0
1,115,403	+				+0.7
1,115,403	+				-0.3
1,115,403	+				-1.3
1,115,404	-				+0.2
1,115,404	-				-2.0
1,115,404	-				+1.0
1,115,404	-				+0.3
1,115,404	-				-0.4
1,115,404	-				+0.8
1,115,404	-				-1.8
1,115,404	-				-1.4
1,115,404	-				-2.7
1,115,404	-				+0.1
1,115,497	-				+0.4
1,115,537	+				+0.6
1,115,537	+				+1.4
1,115,538	-				-2.3
1,115,538	-				-0.7
1,115,823	+		AO353_05055	0.56	-0.6
1,115,823	+		AO353_05055	0.56	+0.4
1,115,823	+		AO353_05055	0.56	-0.7
1,115,824	-		AO353_05055	0.57	+2.0
1,115,832	+		AO353_05055	0.58	+0.2
1,115,832	+		AO353_05055	0.58	-0.3
1,115,850	-		AO353_05055	0.62	-0.3
1,115,850	-		AO353_05055	0.62	-1.7
1,115,850	-		AO353_05055	0.62	-0.1
1,115,850	-		AO353_05055	0.62	-0.3
1,115,850	-		AO353_05055	0.62	-0.3
1,115,881	+		AO353_05055	0.68	+0.1
1,115,882	-		AO353_05055	0.69	+0.1
1,115,882	-		AO353_05055	0.69	-0.4
1,115,917	+		AO353_05055	0.76	-0.3
1,115,917	+		AO353_05055	0.76	+0.2
1,115,917	+		AO353_05055	0.76	+0.4
1,115,918	-		AO353_05055	0.76	+0.8
1,115,918	-		AO353_05055	0.76	+1.3
1,115,918	-		AO353_05055	0.76	+0.0
1,115,934	+		AO353_05055	0.79	+0.4
1,115,934	+		AO353_05055	0.79	+0.9
1,115,934	+		AO353_05055	0.79	+0.4
1,115,934	+		AO353_05055	0.79	-0.7
1,115,935	-		AO353_05055	0.79	-0.3
1,115,995	+				+1.4
1,115,995	+				+1.3
1,115,995	+				+0.3
1,115,995	+				+0.8
1,115,996	-				+2.3
1,115,997	+				+0.7
1,115,998	-				-0.3
1,115,998	-				+0.7
1,115,998	-				-0.6
1,115,998	-				+0.6
1,116,016	+				-0.6
1,116,016	+				-0.3
1,116,017	-				+0.1
1,116,017	-				-0.6
1,116,053	+				+1.3
1,116,053	+				-0.3
1,116,053	+				-2.0
1,116,060	-				+0.4
1,116,061	+				+1.2
1,116,061	+				-0.4
1,116,061	+				+1.0
1,116,061	+				+0.8
1,116,061	+				+0.8
1,116,062	-				+0.1
1,116,181	+		AO353_05060	0.48	-1.8
1,116,181	+		AO353_05060	0.48	-1.0
1,116,181	+		AO353_05060	0.48	+0.3
1,116,181	+		AO353_05060	0.48	+0.1
1,116,181	+		AO353_05060	0.48	-1.6
1,116,182	-		AO353_05060	0.48	-1.0
1,116,182	-		AO353_05060	0.48	-0.2
1,116,182	-		AO353_05060	0.48	-1.2
1,116,182	-		AO353_05060	0.48	+0.5
1,116,266	+		AO353_05060	0.75	-2.5
1,116,267	-		AO353_05060	0.76	+0.0
1,116,277	+		AO353_05060	0.79	+0.3
1,116,351	-				-0.5
1,116,364	+				+0.6
1,116,364	+				-1.5
1,116,365	-				-0.7
1,116,365	-				-1.0
1,116,470	+				-2.2
1,116,470	+				+1.0
1,116,470	+				-0.3
1,116,470	+				+1.0
1,116,471	-				+1.8
1,116,474	+				-1.2
1,116,474	+				-0.1
1,116,474	+				+0.6
1,116,474	+				+0.4
1,116,474	+				-0.4
1,116,474	+				+0.5
1,116,475	-				-1.6
1,116,475	-				-0.1
1,116,475	-				+0.4
1,116,679	+		AO353_05065	0.13	-0.4
1,116,680	-		AO353_05065	0.13	+0.8
1,116,680	-		AO353_05065	0.13	+1.2
1,116,680	-		AO353_05065	0.13	-0.1
1,116,680	-		AO353_05065	0.13	+0.2
1,116,748	+		AO353_05065	0.16	+0.3
1,116,748	+		AO353_05065	0.16	+1.2
1,116,749	-		AO353_05065	0.16	+0.1
1,117,096	+		AO353_05065	0.33	+0.4