Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_04565

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
985,905	+		AO353_04555	0.88	+2.2
985,906	-		AO353_04555	0.88	-2.7
985,978	+				+0.6
986,028	+				-1.4
986,029	-				-0.0
986,029	-				-1.0
986,175	+				-2.6
986,175	+				+0.4
986,175	+				+1.0
986,175	+				-0.6
986,175	+				-0.6
986,175	+				-1.4
986,176	-				+1.0
986,176	-				+0.1
986,176	-				-0.2
986,176	-				-1.5
986,182	+				-1.6
986,183	-				-1.0
986,183	-				+1.0
986,203	+		AO353_04560	0.10	-0.6
986,222	-		AO353_04560	0.17	-0.6
986,411	-		AO353_04560	0.84	-1.4
986,443	+				+0.1
986,443	+				-1.2
986,443	+				-0.8
986,443	+				-1.1
986,444	-				+0.6
986,444	-				-3.3
986,444	-				-0.8
986,444	-				-0.4
986,444	-				-0.6
986,446	+				+0.5
986,446	+				-0.6
986,446	+				-0.3
986,446	+				+1.0
986,446	+				-0.4
986,447	-				-0.0
986,447	-				-0.0
986,447	-				-0.4
986,447	-				-0.6
986,447	-				+0.4
986,544	+				-0.5
986,545	-				+0.3
986,545	-				-0.0
986,545	-				+0.0
986,567	-				-1.3
986,568	+				-0.2
986,568	+				-1.0
986,568	+				+0.2
986,568	+				-0.0
986,568	+				-1.2
986,568	+				-0.2
986,568	+				+2.0
986,568	+				-1.9
986,568	+				-0.5
986,568	+				+0.4
986,568	+				+1.0
986,568	+				-0.4
986,568	+				-0.9
986,568	+				-0.4
986,568	+				-0.0
986,568	+				-0.8
986,568	+				+0.1
986,568	+				+0.4
986,569	-				+2.0
986,569	-				+1.0
986,569	-				-0.0
986,569	-				+2.0
986,569	-				-0.4
986,569	-				-1.5
986,569	-				+0.5
986,569	-				+1.0
986,569	-				-0.0
986,569	-				-1.5
986,569	-				+0.2
986,569	-				-0.4
986,569	-				-0.6
986,569	-				-0.3
986,569	-				-0.8
986,569	-				+0.0
986,569	-				-0.8
986,569	-				+0.8
986,569	-				-0.8
986,620	+				-0.9
986,638	+				-0.7
986,655	-				-1.1
986,673	+				-0.6
986,673	+				-0.2
986,673	+				-1.0
986,674	-				-0.0
986,683	+				-0.2
986,683	+				-1.0
986,684	-				-0.6
986,684	-				+0.2
986,684	-				-1.0
986,688	-				-1.0
986,705	+				-0.0
986,706	-				+0.5
986,706	-				-0.9
986,713	+				-0.0
986,734	-				+0.5
986,734	-				-0.3
986,734	-				+0.3
986,734	-				-1.6
986,793	+				-2.0
986,793	+				-1.7
986,793	+				-1.0
986,794	-				-0.4
986,794	-				-0.2
986,962	+		AO353_04565	0.11	+0.4
986,962	+		AO353_04565	0.11	-1.0
986,962	+		AO353_04565	0.11	-0.8
986,962	+		AO353_04565	0.11	-0.0
986,962	+		AO353_04565	0.11	-0.4
986,987	+		AO353_04565	0.13	-1.6
986,987	+		AO353_04565	0.13	-2.1
986,987	+		AO353_04565	0.13	-1.4
986,988	-		AO353_04565	0.14	+0.4
986,988	-		AO353_04565	0.14	-2.5
986,988	-		AO353_04565	0.14	-0.4
986,988	-		AO353_04565	0.14	-2.4
986,988	-		AO353_04565	0.14	-0.6
987,069	-		AO353_04565	0.22	-0.7
987,183	-		AO353_04565	0.33	-1.2
987,183	-		AO353_04565	0.33	-1.5
987,357	-		AO353_04565	0.50	-2.1
987,357	-		AO353_04565	0.50	-1.8
987,357	-		AO353_04565	0.50	-2.0
987,401	+		AO353_04565	0.55	-0.5
987,401	+		AO353_04565	0.55	-1.2
987,545	+		AO353_04565	0.69	+1.5
987,545	+		AO353_04565	0.69	-0.8
987,545	+		AO353_04565	0.69	-1.0
987,632	+		AO353_04565	0.78	-0.4
987,633	-		AO353_04565	0.78	-1.7
987,633	-		AO353_04565	0.78	+1.4
987,633	-		AO353_04565	0.78	-2.1
987,633	-		AO353_04565	0.78	-1.5
987,779	+				+0.8
987,869	+				-0.0
987,869	+				-0.6
987,870	-				+0.2
987,870	-				-0.7
987,911	-		AO353_04570	0.16	-1.0
987,998	-		AO353_04570	0.40	-0.8
987,998	-		AO353_04570	0.40	+0.2
988,108	+		AO353_04570	0.72	-0.1
988,108	+		AO353_04570	0.72	-0.1
988,108	+		AO353_04570	0.72	-0.5
988,108	+		AO353_04570	0.72	+0.8
988,108	+		AO353_04570	0.72	+0.5
988,108	+		AO353_04570	0.72	-0.8
988,108	+		AO353_04570	0.72	-1.3
988,108	+		AO353_04570	0.72	+0.1
988,108	+		AO353_04570	0.72	+0.9
988,108	+		AO353_04570	0.72	+0.8
988,109	-		AO353_04570	0.72	+0.0
988,109	-		AO353_04570	0.72	+0.5
988,109	-		AO353_04570	0.72	+1.0
988,109	-		AO353_04570	0.72	-2.4
988,133	+		AO353_04570	0.79	+0.4
988,204	+				+0.6
988,204	+				-0.0
988,204	+				-2.1
988,205	-				-0.4
988,205	-				+0.1
988,205	-				-0.8
988,205	-				+0.4
988,205	-				+2.7
988,205	-				+1.1
988,205	-				-0.4
988,205	-				+0.2
988,205	-				-1.1
988,205	-				-1.7
988,205	-				-1.4
988,205	-				-1.1
988,259	+				-1.3
988,260	-				+1.0
988,288	+				-0.0
988,288	+				+0.1
988,288	+				-1.4
988,289	-				-0.8
988,289	-				-1.1
988,298	-				-0.6
988,298	-				+0.9
988,298	-				-0.8
988,298	-				-0.5
988,483	+		AO353_04575	0.12	+1.4
988,483	+		AO353_04575	0.12	+1.6
988,483	+		AO353_04575	0.12	-0.6
988,484	-		AO353_04575	0.12	-1.0
988,502	+		AO353_04575	0.14	+0.7
988,503	-		AO353_04575	0.14	+1.6
988,522	+		AO353_04575	0.16	-0.2
988,522	+		AO353_04575	0.16	+0.2
988,522	+		AO353_04575	0.16	-1.4
988,522	+		AO353_04575	0.16	-0.5
988,522	+		AO353_04575	0.16	-0.2
988,522	+		AO353_04575	0.16	+1.0
988,522	+		AO353_04575	0.16	-0.5
988,522	+		AO353_04575	0.16	-0.0
988,523	-		AO353_04575	0.16	-0.2
988,523	-		AO353_04575	0.16	-1.7
988,523	-		AO353_04575	0.16	+0.1
988,523	-		AO353_04575	0.16	-1.7
988,523	-		AO353_04575	0.16	-0.5
988,523	-		AO353_04575	0.16	+1.4
988,523	-		AO353_04575	0.16	-1.0
988,784	+		AO353_04575	0.44	-0.0
988,784	+		AO353_04575	0.44	-0.5
988,784	+		AO353_04575	0.44	-0.0
988,784	+		AO353_04575	0.44	-1.8
988,785	-		AO353_04575	0.44	-1.4
988,785	-		AO353_04575	0.44	+0.7
988,785	-		AO353_04575	0.44	-1.0
988,785	-		AO353_04575	0.44	+2.0