Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_00495

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
97,894	+		AO353_00485	0.79	-0.3
97,895	-		AO353_00485	0.79	+0.7
97,903	+		AO353_00485	0.80	-1.5
97,904	-		AO353_00485	0.80	-0.1
97,968	+		AO353_00485	0.86	-1.1
97,971	+		AO353_00485	0.87	+0.5
97,971	+		AO353_00485	0.87	+0.8
97,972	-		AO353_00485	0.87	+0.1
97,978	+		AO353_00485	0.87	-0.6
97,979	-		AO353_00485	0.87	+1.3
97,979	-		AO353_00485	0.87	-2.5
98,010	+				-0.1
98,151	+				+0.0
98,151	+				+1.0
98,152	-				-0.7
98,155	+				+0.3
98,155	+				+0.7
98,155	+				-2.0
98,155	+				+1.1
98,155	+				-1.5
98,155	+				+0.1
98,155	+				-1.3
98,155	+				+1.0
98,155	+				+0.8
98,155	+				-0.7
98,155	+				-0.7
98,155	+				-0.3
98,155	+				-0.0
98,156	-				+1.2
98,156	-				-0.0
98,156	-				+1.0
98,156	-				-0.3
98,156	-				+0.2
98,156	-				-1.0
98,156	-				+0.3
98,156	-				-0.2
98,156	-				-0.7
98,156	-				+1.2
98,156	-				+0.2
98,159	+				+0.7
98,159	+				+0.9
98,159	+				+1.8
98,159	+				+0.6
98,159	+				+2.8
98,159	+				+0.1
98,160	-				-1.1
98,160	-				-1.5
98,160	-				-1.3
98,160	-				-0.1
98,271	+		AO353_00490	0.22	-0.1
98,492	+		AO353_00490	0.64	+0.4
98,534	+		AO353_00490	0.72	+0.1
98,535	-		AO353_00490	0.72	-0.6
98,535	-		AO353_00490	0.72	+0.5
98,642	+				+0.9
98,664	+				+0.2
98,664	+				-0.1
98,666	+				-0.5
98,666	+				+0.1
98,666	+				-0.3
98,666	+				+0.1
98,667	-				-0.8
98,667	-				-0.3
98,667	-				-2.1
98,667	-				+0.1
98,667	-				+0.0
98,667	-				-1.7
98,667	-				-1.2
98,705	+				+0.1
98,705	+				+1.3
98,705	+				-0.5
98,706	-				-1.0
98,706	-				+1.3
98,714	+				-1.3
98,714	+				-1.7
98,828	-				-2.0
98,828	-				+1.3
98,920	+				-2.0
99,127	+		AO353_00495	0.11	-2.0
99,127	+		AO353_00495	0.11	-0.9
99,127	+		AO353_00495	0.11	-0.8
99,127	+		AO353_00495	0.11	-2.4
99,128	-		AO353_00495	0.12	-0.7
101,471	-				-1.4
101,471	-				-1.7
101,509	-				+0.2
101,509	-				-1.1
101,509	-				-2.4
101,509	-				+0.9
101,511	-				+0.7
101,511	-				-0.7
101,511	-				-1.0
101,511	-				-0.1
101,511	-				+0.4
101,511	-				+0.1
101,511	-				-0.8
101,511	-				-0.9
101,511	-				+0.7
101,511	-				-0.0
101,511	-				+1.7
101,511	-				+0.7
101,511	-				+0.0
101,511	-				+1.0
101,511	-				-0.7
101,511	-				+0.4
101,511	-				+1.1
101,511	-				-0.0
101,511	-				+0.2
101,511	-				+0.9
101,511	-				+1.5
101,513	-				-0.7
101,513	-				+0.9
101,513	-				+0.2
101,513	-				+0.1
101,513	-				+0.1
101,513	-				-0.0
101,513	-				-0.8
101,513	-				+0.3
101,513	-				-1.2
101,513	-				+1.2
101,513	-				+0.3
101,513	-				+0.7
101,513	-				+1.1
101,513	-				+0.3
101,513	-				+0.9
101,513	-				+0.7
101,513	-				+1.0
101,513	-				+1.1
101,513	-				+0.1
101,513	-				-0.1
101,513	-				-0.1
101,513	-				-0.6
101,513	-				+0.2
101,513	-				+0.7
101,513	-				+0.9
101,513	-				-1.1
101,513	-				-0.3
101,513	-				+1.1
101,513	-				+1.2
101,513	-				+0.7
101,513	-				+2.1
101,513	-				-0.3
101,513	-				+0.0
101,514	+				-0.7
101,514	+				-1.1
101,515	-				-0.2
101,515	-				+1.7
101,515	-				-0.7
101,515	-				+0.3
101,515	-				+0.1
101,686	+		AO353_00500	0.52	+2.0
101,686	+		AO353_00500	0.52	-0.3
101,686	+		AO353_00500	0.52	+0.9
101,698	+		AO353_00500	0.57	+2.0
101,698	+		AO353_00500	0.57	-0.2
101,698	+		AO353_00500	0.57	-0.3
101,698	+				-0.3
101,698	+		AO353_00500	0.57	+2.0
101,699	-		AO353_00500	0.58	+0.2
101,745	+		AO353_00500	0.77	+0.2
101,745	+		AO353_00500	0.77	-0.3
101,746	-		AO353_00500	0.78	-0.9
101,752	+		AO353_00500	0.80	-1.1
101,752	+		AO353_00500	0.80	+1.6
101,767	+		AO353_00500	0.86	+2.0
101,767	+		AO353_00500	0.86	-1.1
101,767	+		AO353_00500	0.86	-0.9
101,768	-		AO353_00500	0.87	-0.8
101,768	-		AO353_00500	0.87	+0.7
101,768	-		AO353_00500	0.87	+2.1
101,776	+				-1.7
101,776	+				+0.3
101,790	+				-1.9
101,790	+				+2.1
101,828	+				+0.7
101,900	+				+0.7
101,956	+				+2.0
101,956	+				-0.2
101,956	+				+0.7
101,957	-				-0.1
101,986	+				+1.4
101,986	+				+0.3
101,986	+				-0.3
101,986	+				+0.4
101,986	+				+0.7
101,986	+				+0.3
101,987	-				-0.1
101,987	-				+2.0
101,987	-				-0.7
101,987	-				+0.5
101,987	-				-0.7
101,987	-				-0.1
101,987	-				+1.3
101,987	-				-0.1
101,987	-				+1.2
101,987	-				+1.2
102,009	+				-0.5
102,009	+				+2.1
102,009	+				+0.8
102,010	-				+1.0
102,010	-				+2.0
102,010	-				+1.3
102,010	-				+2.2
102,010	-				-0.1
102,010	-				+0.6
102,010	-				+0.4
102,010	-				+1.7
102,010	-				+1.5
102,010	-				+2.1
102,010	-				+0.2
102,420	+		AO353_00505	0.44	+0.3
102,421	-		AO353_00505	0.44	-0.7
102,421	-		AO353_00505	0.44	+1.5
102,421	-		AO353_00505	0.44	+1.1