Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_00435

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
84,227	+		AO353_00430	0.50	-0.3
84,304	-		AO353_00430	0.55	+1.2
84,304	-		AO353_00430	0.55	-0.2
84,304	-		AO353_00430	0.55	-0.3
84,537	+		AO353_00430	0.71	-1.2
84,542	+		AO353_00430	0.71	-1.8
84,542	+		AO353_00430	0.71	+1.3
84,542	+		AO353_00430	0.71	-0.3
84,543	-		AO353_00430	0.71	-1.8
84,543	-		AO353_00430	0.71	-1.1
84,543	-		AO353_00430	0.71	+0.2
84,584	+		AO353_00430	0.74	-0.7
84,585	-		AO353_00430	0.74	-0.3
84,828	+				-0.3
84,828	+				-1.0
84,828	+				+0.1
84,829	-				-0.3
84,858	+				+0.1
84,963	+				-0.3
84,963	+				-0.8
84,964	-				-0.6
84,984	-				-1.0
84,988	+				-0.7
84,989	-				+0.2
84,989	-				-0.7
84,989	-				-1.1
85,088	+				-0.6
85,088	+				-1.3
85,089	-				+0.1
85,089	-				+1.7
85,146	+				+2.0
85,171	+				+3.5
85,172	-				+1.3
85,172	-				+2.3
85,249	+				+1.6
85,250	-				-0.7
85,361	+				+1.7
85,362	-				+2.8
85,390	+				+3.0
85,390	+				+2.8
85,390	+				+1.8
85,390	+				-0.8
85,390	+				+2.3
85,390	+				+0.7
85,390	+				-0.9
85,390	+				+1.8
85,390	+				+1.5
85,390	+				+1.7
85,390	+				+1.5
85,390	+				+1.2
85,391	-				+4.1
85,391	-				+1.7
85,391	-				+2.7
85,391	-				+1.0
85,391	-				+3.5
85,391	-				+2.0
85,391	-				+2.7
85,391	-				+2.8
85,391	-				+3.0
85,391	-				+1.5
85,391	-				+2.1
85,391	-				+2.4
85,391	-				+2.3
85,391	-				+3.3
85,391	-				+1.8
85,392	+				+2.3
85,392	+				+1.8
85,392	+				+1.6
85,392	+				+1.4
85,392	+				+1.3
85,393	-				+2.6
85,393	-				+2.4
85,393	-				+2.1
85,393	-				+1.9
85,470	+				+3.0
85,470	+				+1.7
85,470	+				+1.6
85,471	-				+0.7
85,471	-				+3.3
85,598	+		AO353_00435	0.14	+0.5
85,598	+		AO353_00435	0.14	+3.2
85,599	-		AO353_00435	0.14	+2.4
85,599	-		AO353_00435	0.14	+1.7
85,599	-		AO353_00435	0.14	+2.0
85,599	-		AO353_00435	0.14	+1.6
85,620	+		AO353_00435	0.14	+1.5
85,620	+		AO353_00435	0.14	+0.7
85,709	-		AO353_00435	0.17	+2.8
85,885	+		AO353_00435	0.22	+1.9
85,885	+		AO353_00435	0.22	+2.2
85,886	-		AO353_00435	0.22	+2.6
85,886	-		AO353_00435	0.22	+2.1
85,886	-		AO353_00435	0.22	+1.5
85,886	-		AO353_00435	0.22	+2.0
85,904	+		AO353_00435	0.22	+1.2
85,904	+		AO353_00435	0.22	+3.2
85,904	+		AO353_00435	0.22	+2.4
85,905	-		AO353_00435	0.22	+1.2
85,905	-		AO353_00435	0.22	+1.8
85,907	+		AO353_00435	0.23	+2.0
85,907	+		AO353_00435	0.23	+2.1
85,907	+		AO353_00435	0.23	+1.8
85,907	+		AO353_00435	0.23	+1.7
85,907	+		AO353_00435	0.23	+2.0
85,907	+		AO353_00435	0.23	+2.9
85,908	-		AO353_00435	0.23	+3.2
85,908	-		AO353_00435	0.23	+1.5
85,908	-		AO353_00435	0.23	+0.7
85,908	-		AO353_00435	0.23	+2.2
85,949	+		AO353_00435	0.24	+1.1
85,949	+		AO353_00435	0.24	+1.9
85,950	-		AO353_00435	0.24	+2.5
86,191	+		AO353_00435	0.31	+0.4
86,316	+		AO353_00435	0.34	+2.6
86,316	+		AO353_00435	0.34	+2.2
86,316	+		AO353_00435	0.34	+2.2
86,317	-		AO353_00435	0.34	+2.6
86,317	-		AO353_00435	0.34	+3.0
86,317	-		AO353_00435	0.34	+2.7
86,534	-		AO353_00435	0.41	+0.3
86,590	+		AO353_00435	0.42	+2.8
86,672	+		AO353_00435	0.45	+0.1
86,693	+		AO353_00435	0.45	+1.7
86,693	+		AO353_00435	0.45	+0.9
86,693	+		AO353_00435	0.45	+2.2
86,693	+		AO353_00435	0.45	+0.3
86,693	+		AO353_00435	0.45	+1.7
86,693	+		AO353_00435	0.45	+2.0
86,693	+		AO353_00435	0.45	+2.1
86,694	-		AO353_00435	0.45	+1.7
86,694	-		AO353_00435	0.45	+1.7
86,694	-		AO353_00435	0.45	+0.7
86,694	-		AO353_00435	0.45	+2.0
86,694	-		AO353_00435	0.45	+1.7
86,694	-		AO353_00435	0.45	+1.5
86,694	-		AO353_00435	0.45	+3.0
86,694	-		AO353_00435	0.45	+1.2
86,694	-		AO353_00435	0.45	+2.1
86,694	-		AO353_00435	0.45	+2.9
86,694	-		AO353_00435	0.45	+1.2
86,729	+		AO353_00435	0.46	+2.3
86,849	+		AO353_00435	0.50	+3.1
86,849	+		AO353_00435	0.50	+0.9
86,849	+		AO353_00435	0.50	+0.5
86,849	+		AO353_00435	0.50	+1.2
86,849	+		AO353_00435	0.50	+2.7
86,849	+		AO353_00435	0.50	+1.5
86,849	+		AO353_00435	0.50	+2.4
86,849	+		AO353_00435	0.50	+1.9
86,849	+		AO353_00435	0.50	+2.9
86,849	+		AO353_00435	0.50	+1.2
86,849	+		AO353_00435	0.50	+1.7
86,849	+		AO353_00435	0.50	+1.8
86,849	+		AO353_00435	0.50	+0.3
86,849	+		AO353_00435	0.50	+2.9
86,849	+		AO353_00435	0.50	+1.5
86,850	-		AO353_00435	0.50	+2.8
86,850	-		AO353_00435	0.50	+2.2
86,850	-		AO353_00435	0.50	+2.4
86,850	-				+3.0
86,850	-		AO353_00435	0.50	+0.5
86,850	-		AO353_00435	0.50	+2.6
86,850	-		AO353_00435	0.50	+2.7
86,850	-		AO353_00435	0.50	+2.1
86,850	-		AO353_00435	0.50	+2.4
86,850	-		AO353_00435	0.50	+1.5
86,850	-		AO353_00435	0.50	+2.8
86,850	-		AO353_00435	0.50	+1.6
86,850	-		AO353_00435	0.50	+2.8
86,850	-		AO353_00435	0.50	+0.8
86,850	-		AO353_00435	0.50	+0.7
86,850	-		AO353_00435	0.50	+1.9
86,850	-		AO353_00435	0.50	+2.1
86,850	-		AO353_00435	0.50	+1.5
86,877	-		AO353_00435	0.51	+3.9
86,877	-		AO353_00435	0.51	+1.9
86,903	+		AO353_00435	0.51	+1.6
87,131	+		AO353_00435	0.58	-0.3
87,131	+				+0.9
87,131	+		AO353_00435	0.58	-0.9
87,131	+		AO353_00435	0.58	+1.9
87,131	+		AO353_00435	0.58	+1.2
87,131	+		AO353_00435	0.58	+2.4
87,131	+		AO353_00435	0.58	-0.9
87,131	+		AO353_00435	0.58	+0.5
87,131	+		AO353_00435	0.58	+2.4
87,131	+		AO353_00435	0.58	+2.2
87,132	-		AO353_00435	0.58	+2.5
87,132	-		AO353_00435	0.58	+3.2
87,132	-		AO353_00435	0.58	+1.4
87,132	-		AO353_00435	0.58	+1.5
87,132	-		AO353_00435	0.58	+1.5
87,132	-		AO353_00435	0.58	+2.4
87,132	-		AO353_00435	0.58	+0.7
87,132	-		AO353_00435	0.58	+3.1
87,132	-		AO353_00435	0.58	+2.9
87,132	-		AO353_00435	0.58	+1.4
87,288	+		AO353_00435	0.63	+2.3
87,288	+		AO353_00435	0.63	+2.7
87,288	+		AO353_00435	0.63	+1.2
87,288	+		AO353_00435	0.63	+1.7
87,289	-		AO353_00435	0.63	+2.6
87,289	-		AO353_00435	0.63	+2.8
87,289	-		AO353_00435	0.63	+2.1
87,572	+		AO353_00435	0.71	+1.8
87,572	+		AO353_00435	0.71	+1.1
87,572	+		AO353_00435	0.71	+1.9
87,573	-		AO353_00435	0.71	+1.9
87,573	-		AO353_00435	0.71	+2.8
87,573	-		AO353_00435	0.71	-0.4
87,573	-		AO353_00435	0.71	+1.5
87,573	-		AO353_00435	0.71	+1.4
87,573	-		AO353_00435	0.71	+3.4
87,573	-		AO353_00435	0.71	+2.6
87,573	-		AO353_00435	0.71	+1.6
87,573	-		AO353_00435	0.71	+1.8
87,573	-		AO353_00435	0.71	-0.9
87,575	+		AO353_00435	0.71	+1.4
87,575	+		AO353_00435	0.71	+0.7
87,575	+		AO353_00435	0.71	+1.0
87,575	+		AO353_00435	0.71	+0.9
87,575	+		AO353_00435	0.71	+1.4
87,575	+		AO353_00435	0.71	+1.5
87,576	-		AO353_00435	0.71	+2.2
87,576	-		AO353_00435	0.71	+2.1
87,707	+		AO353_00435	0.75	+1.3
87,707	+		AO353_00435	0.75	+2.1
87,707	+		AO353_00435	0.75	+2.7
87,707	+		AO353_00435	0.75	+2.0
87,708	-		AO353_00435	0.75	+2.5
87,708	-		AO353_00435	0.75	+1.7
87,708	-		AO353_00435	0.75	+1.8
87,708	-		AO353_00435	0.75	-0.3
87,708	-		AO353_00435	0.75	+2.1
87,708	-		AO353_00435	0.75	+1.9
87,708	-		AO353_00435	0.75	+1.5
87,866	+		AO353_00435	0.79	+1.3
87,867	-		AO353_00435	0.79	+0.1
87,867	-		AO353_00435	0.79	+2.0
87,867	-		AO353_00435	0.79	+3.0
87,867	-		AO353_00435	0.79	+1.2
87,940	+		AO353_00435	0.81	-0.4
88,058	+		AO353_00435	0.85	+1.1
88,058	+				+3.5
88,058	+		AO353_00435	0.85	+1.2
88,058	+		AO353_00435	0.85	+2.6
88,058	+		AO353_00435	0.85	+1.2
88,059	-		AO353_00435	0.85	+2.9
88,059	-		AO353_00435	0.85	+2.7
88,059	-		AO353_00435	0.85	+2.2
88,059	-		AO353_00435	0.85	+1.7
88,181	+		AO353_00435	0.88	+1.2
88,181	+		AO353_00435	0.88	+1.7
88,214	+		AO353_00435	0.89	+2.7
88,214	+		AO353_00435	0.89	+1.2
88,215	-		AO353_00435	0.89	+3.7
88,215	-		AO353_00435	0.89	+2.6
88,466	+				-1.1
88,467	-				+1.4
88,532	-				+2.3
88,532	-				+2.7
88,534	+				+1.2
88,534	+				-1.7
88,534	+				-1.3
88,534	+				+0.4
88,534	+				+2.5
88,534	+				+1.7
88,535	-				+2.6
88,535	-				+1.2
88,659	+		AO353_00440	0.12	+0.4
88,659	+		AO353_00440	0.12	+0.3
88,659	+		AO353_00440	0.12	+1.1
88,660	-		AO353_00440	0.12	-1.3
88,660	-		AO353_00440	0.12	-1.9
88,660	-		AO353_00440	0.12	+1.2
88,660	-		AO353_00440	0.12	+0.9
88,822	-		AO353_00440	0.41	-0.5
88,834	+		AO353_00440	0.43	+0.3
88,834	+				+0.7
88,835	-		AO353_00440	0.43	-0.5
88,835	-		AO353_00440	0.43	+1.1
88,998	+		AO353_00440	0.72	+0.7
89,064	+		AO353_00440	0.84	-0.4
89,065	-		AO353_00440	0.84	+0.9
89,065	-		AO353_00440	0.84	-0.5
89,065	-		AO353_00440	0.84	+0.4
89,347	+				+0.7
89,348	-				+0.7
89,348	-				+0.1
89,348	-				+1.7
89,348	-				-0.7
89,379	+				-0.3
89,379	+				+0.1
89,531	-		AO353_00445	0.13	+1.2
89,544	+				+1.7