Strain Fitness in Shewanella loihica PV-4 around Shew_3807

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
4,530,520	+				+0.2
4,530,520	+				-0.2
4,530,520	+				-0.7
4,530,520	+				-0.1
4,530,520	+				-0.0
4,530,520	+				+2.3
4,530,528	-				-0.8
4,530,528	-				+2.7
4,530,528	-				-0.0
4,530,528	-				+0.5
4,530,528	-				+0.5
4,531,053	+		Shew_3807	0.50	-0.5
4,531,080	+		Shew_3807	0.52	+0.3
4,531,088	+		Shew_3807	0.53	-1.0
4,531,297	+		Shew_3807	0.72	-0.4
4,531,328	-		Shew_3807	0.75	-0.2
4,531,428	-		Shew_3807	0.84	-0.1
4,531,476	+		Shew_3807	0.88	-0.1
4,531,492	+				-0.2
4,531,670	+				-0.1
4,531,678	-				+0.7
4,531,690	-				+0.1
4,531,777	+		Shew_3808	0.12	-0.9
4,531,851	+		Shew_3808	0.18	-0.1
4,531,959	-		Shew_3808	0.27	+0.0
4,532,008	+		Shew_3808	0.31	-0.1
4,532,160	-		Shew_3808	0.43	+0.2
4,532,174	+		Shew_3808	0.45	-0.4
4,532,174	+		Shew_3808	0.45	+0.0
4,532,174	+		Shew_3808	0.45	+0.5
4,532,182	-		Shew_3808	0.45	+0.5
4,532,182	-		Shew_3808	0.45	+0.6
4,532,182	-		Shew_3808	0.45	-1.7
4,532,203	-		Shew_3808	0.47	-0.0
4,532,276	+		Shew_3808	0.53	-0.5
4,532,458	+		Shew_3808	0.68	+0.1
4,532,535	-		Shew_3808	0.75	-1.0