Strain Fitness in Shewanella loihica PV-4 around Shew_3605

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
4,302,592	-				-0.4
4,302,675	-				-0.1
4,302,824	-		Shew_3604	0.23	+0.7
4,303,133	-		Shew_3604	0.55	+0.1
4,303,176	-		Shew_3604	0.60	+0.5
4,303,176	-		Shew_3604	0.60	+0.5
4,303,177	-		Shew_3604	0.60	+0.0
4,303,281	+		Shew_3604	0.71	-1.0
4,303,286	-		Shew_3604	0.71	-0.9
4,303,350	+		Shew_3604	0.78	-0.2
4,303,406	-		Shew_3604	0.84	+0.3
4,303,406	-		Shew_3604	0.84	-0.3
4,303,469	-				-0.7
4,303,469	-				+0.0
4,303,569	-				+0.1
4,303,634	+				-0.9
4,303,646	+				-1.2
4,303,951	-		Shew_3605	0.53	-1.0
4,304,164	+		Shew_3605	0.83	-0.1
4,304,232	+				-0.6
4,304,253	-				-0.6
4,304,254	+				-0.9
4,304,337	+				+0.7