Strain Fitness in Shewanella loihica PV-4 around Shew_3364
Experiment: Doxycycline hyclate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Doxycycline hyclate 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,011,162 | + | Shew_3363 | 0.41 | +0.3 | |
4,011,252 | - | Shew_3363 | 0.61 | +0.8 | |
4,011,380 | + | Shew_3363 | 0.89 | +0.5 | |
4,011,393 | - | -1.4 | |||
4,011,403 | + | +0.2 | |||
4,011,708 | - | Shew_3364 | 0.63 | -0.6 | |
4,011,745 | - | Shew_3364 | 0.72 | -0.4 | |
4,012,438 | - | Shew_3365 | 0.39 | +0.1 | |
4,012,438 | - | Shew_3365 | 0.39 | -0.4 | |
4,012,522 | - | Shew_3365 | 0.46 | +0.2 | |
4,012,842 | - | Shew_3365 | 0.69 | -0.8 |
Or see this region's nucleotide sequence