Strain Fitness in Shewanella loihica PV-4 around Shew_2653

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
3,125,470	-		Shew_2651	0.66	+3.4
3,125,876	-		Shew_2652	0.38	+0.6
3,125,927	-		Shew_2652	0.45	+0.5
3,126,246	-		Shew_2652	0.86	-0.6
3,126,875	-		Shew_2653	0.72	-1.0
3,127,427	+	queF	Shew_2654	0.38	-2.6
3,127,676	+	queF	Shew_2654	0.66	-0.8
3,127,676	+	queF	Shew_2654	0.66	+0.8
3,127,684	-	queF	Shew_2654	0.67	+0.4
3,128,051	+				+0.9
3,128,059	-				-0.1
3,128,059	-				-0.5