Strain Fitness in Shewanella loihica PV-4 around Shew_2390

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
2,801,587	+		Shew_2389	0.77	-0.0
2,801,595	-		Shew_2389	0.78	+1.1
2,801,667	+		Shew_2389	0.83	+2.3
2,801,768	-		Shew_2389	0.89	+1.0
2,801,980	+				+0.1
2,801,980	+				+0.7
2,801,988	-				+1.4
2,801,988	-				+0.2
2,802,323	+				+0.1
2,802,956	+		Shew_2390	0.20	+0.6
2,802,964	-		Shew_2390	0.20	+0.9
2,802,998	-		Shew_2390	0.22	-0.8
2,803,176	+		Shew_2390	0.30	-2.1
2,803,481	-		Shew_2390	0.43	-0.2
2,803,608	-		Shew_2390	0.49	-0.6
2,803,625	-		Shew_2390	0.49	-1.0
2,803,682	+		Shew_2390	0.52	-0.3
2,803,985	-		Shew_2390	0.65	+0.5
2,804,127	+		Shew_2390	0.71	+0.1
2,804,127	+		Shew_2390	0.71	-0.5
2,804,495	-		Shew_2390	0.88	+0.2
2,804,495	-		Shew_2390	0.88	-0.4
2,804,551	-				+0.1
2,804,663	-				+0.7
2,804,720	-				-0.5
2,805,149	+	pflA	Shew_2391	0.36	+0.7
2,805,154	+	pflA	Shew_2391	0.37	+0.2
2,805,162	-	pflA	Shew_2391	0.38	-0.1
2,805,162	-	pflA	Shew_2391	0.38	+0.7
2,805,183	+	pflA	Shew_2391	0.41	+0.3