Strain Fitness in Shewanella loihica PV-4 around Shew_2385

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
2,791,235	+				+0.0
2,791,235	+				+0.5
2,791,243	-				+0.3
2,791,323	+				-0.8
2,791,366	+				+0.1
2,791,394	-				-0.1
2,791,479	+				-0.2
2,791,603	-				-0.0
2,792,189	-				-0.4
2,792,189	-				-0.7
2,792,189	-				+0.5
2,792,189	-				-0.8
2,792,229	-				-1.4
2,792,244	-				-1.0
2,792,259	-				-1.3
2,792,400	-				-2.0
2,792,405	+				-2.2
2,792,774	+		Shew_2385	0.20	-0.4
2,793,052	+		Shew_2385	0.31	-2.2
2,793,060	-		Shew_2385	0.31	-1.0
2,793,171	-		Shew_2385	0.35	-1.3
2,793,214	+		Shew_2385	0.37	-0.3
2,793,297	-		Shew_2385	0.40	-0.5
2,793,473	-		Shew_2385	0.46	-1.0
2,794,055	-		Shew_2385	0.68	+0.2
2,794,080	-		Shew_2385	0.69	-0.6
2,794,097	+		Shew_2385	0.69	-1.8
2,795,107	-				-1.7
2,795,810	+		Shew_2386	0.54	-0.9