Strain Fitness in Shewanella loihica PV-4 around Shew_2168
Experiment: Doxycycline hyclate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Doxycycline hyclate 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,520,520 | - | Shew_2166 | 0.84 | -0.2 | |
2,521,212 | + | +0.1 | |||
2,521,306 | - | Shew_2167 | 0.16 | +0.7 | |
2,521,599 | + | Shew_2168 | 0.32 | -0.4 | |
2,521,599 | + | Shew_2168 | 0.32 | -0.4 | |
2,521,705 | + | Shew_2168 | 0.65 | -1.7 | |
2,522,376 | + | Shew_2169 | 0.39 | +0.2 | |
2,522,581 | - | Shew_2169 | 0.61 | -0.4 | |
2,522,754 | + | Shew_2169 | 0.79 | +0.0 |
Or see this region's nucleotide sequence