Strain Fitness in Shewanella loihica PV-4 around Shew_2114

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
2,448,274	+				-0.1
2,448,985	-				-0.1
2,449,243	-		Shew_2114	0.15	+0.5
2,449,411	+		Shew_2114	0.36	+0.6
2,449,484	-		Shew_2114	0.46	+0.7
2,449,484	-		Shew_2114	0.46	+0.4
2,449,529	-		Shew_2114	0.51	-0.4
2,449,959	-				+1.2
2,450,147	-				+1.3
2,450,281	-		Shew_2115	0.18	+0.7
2,450,301	-		Shew_2115	0.19	+2.2
2,450,525	-		Shew_2115	0.34	+1.1
2,450,611	+		Shew_2115	0.39	+1.6
2,450,661	-		Shew_2115	0.43	+1.7
2,450,682	+		Shew_2115	0.44	+2.2
2,450,780	-		Shew_2115	0.50	+2.2