Strain Fitness in Shewanella loihica PV-4 around Shew_1899

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
2,193,279	+				-0.3
2,193,558	+				-0.6
2,193,568	+				+0.4
2,193,613	-				+1.0
2,193,665	+				+1.5
2,193,692	+				+0.2
2,193,700	-				-0.1
2,193,759	-				-1.3
2,193,833	+				-0.0
2,193,852	-				-0.1
2,193,856	+				-0.2
2,193,864	-				-0.7
2,194,219	+		Shew_1899	0.74	-0.3
2,194,240	-		Shew_1899	0.78	-0.9
2,194,247	-		Shew_1899	0.79	-0.4
2,194,368	+				-0.3
2,194,371	+				-1.3
2,194,455	+				-0.5
2,194,455	+				+0.1
2,194,463	-				+0.2
2,194,463	-				+2.8
2,194,465	+				-0.0
2,194,473	-				-0.6
2,194,473	-				-0.5
2,194,473	-				+0.5
2,194,473	-				-0.5
2,194,626	-				+0.1
2,194,757	+				+0.5
2,194,865	+				+0.3
2,194,902	+				-0.1