Strain Fitness in Shewanella loihica PV-4 around Shew_1767

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
2,018,855	-				+0.1
2,018,997	+		Shew_1766	0.26	-0.4
2,019,083	-		Shew_1766	0.47	-0.5
2,019,085	-		Shew_1766	0.47	-0.4
2,019,170	+		Shew_1766	0.68	-0.3
2,019,217	+		Shew_1766	0.79	+0.5
2,019,225	-		Shew_1766	0.81	-1.5
2,019,466	-				-2.9
2,019,537	-				-0.9
2,020,087	+		Shew_1767	0.16	-2.9
2,020,253	+		Shew_1767	0.20	-3.1
2,020,444	+		Shew_1767	0.25	-4.3
2,020,966	+		Shew_1767	0.39	-2.4
2,021,142	-		Shew_1767	0.43	-0.9
2,021,252	+		Shew_1767	0.46	-2.4
2,022,006	+		Shew_1767	0.65	-2.5
2,022,014	-		Shew_1767	0.66	-2.7
2,022,092	-		Shew_1767	0.68	-3.1
2,022,108	-		Shew_1767	0.68	-2.3
2,022,165	-		Shew_1767	0.70	-3.0
2,022,177	-		Shew_1767	0.70	-2.5
2,022,230	-		Shew_1767	0.71	-2.7
2,022,483	+		Shew_1767	0.78	-2.7
2,022,783	-		Shew_1767	0.85	-3.7
2,022,838	-		Shew_1767	0.87	-2.2
2,022,838	-		Shew_1767	0.87	-2.9
2,022,840	+		Shew_1767	0.87	-2.1
2,023,763	+				+0.2
2,023,847	-		Shew_1768	0.50	+0.6
2,023,859	-		Shew_1768	0.58	+0.0
2,023,928	-				+0.4
2,023,961	-				-0.1
2,024,168	+		Shew_1769	0.79	+0.8
2,024,322	+				-0.1