Strain Fitness in Shewanella loihica PV-4 around Shew_1364

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
1,572,261	-		Shew_1363	0.21	-0.6
1,572,350	+		Shew_1363	0.30	-2.2
1,572,509	-		Shew_1363	0.44	-0.3
1,572,529	+		Shew_1363	0.46	-0.4
1,572,529	+		Shew_1363	0.46	-0.3
1,572,529	+		Shew_1363	0.46	+0.3
1,572,969	+		Shew_1363	0.87	-0.5
1,572,969	+		Shew_1363	0.87	-0.4
1,572,969	+		Shew_1363	0.87	-0.3
1,572,977	-		Shew_1363	0.87	-0.6
1,573,016	-				-1.6
1,573,518	+		Shew_1364	0.31	-1.0
1,573,827	+		Shew_1364	0.53	-0.5
1,573,886	-		Shew_1364	0.58	-0.6
1,574,174	+		Shew_1364	0.79	-0.8
1,574,298	+		Shew_1364	0.89	-0.5
1,574,306	-		Shew_1364	0.89	-0.6
1,574,343	+				+0.4
1,574,837	+		Shew_1365	0.57	-0.5
1,574,919	+		Shew_1365	0.81	+0.1
1,575,120	+				-0.4