Strain Fitness in Shewanella loihica PV-4 around Shew_1139

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
1,312,500	-		Shew_1138	0.22	-0.5
1,312,531	-		Shew_1138	0.25	+1.1
1,312,531	-		Shew_1138	0.25	+0.3
1,312,773	-		Shew_1138	0.48	-0.5
1,312,821	+		Shew_1138	0.53	+0.5
1,313,169	+		Shew_1138	0.87	+0.8
1,313,213	+				-0.1
1,313,213	+				+0.0
1,313,243	+				-0.2
1,313,573	+		Shew_1139	0.23	-1.2
1,313,692	-		Shew_1139	0.33	-0.7
1,314,179	+		Shew_1139	0.77	-0.8
1,314,187	-		Shew_1139	0.78	-1.2
1,314,591	-				-0.6
1,314,965	+		Shew_1140	0.38	-0.2
1,315,193	-		Shew_1140	0.59	-0.1