Strain Fitness in Shewanella loihica PV-4 around Shew_0972

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
1,115,365	+				+1.6
1,115,615	-		Shew_0971	0.40	-0.1
1,115,789	+		Shew_0971	0.63	+0.2
1,115,811	+		Shew_0971	0.66	+0.1
1,115,858	+		Shew_0971	0.72	-0.1
1,115,970	+		Shew_0971	0.86	+0.1
1,116,053	-				-0.3
1,116,053	-				+0.0
1,116,273	-		Shew_0972	0.14	+1.3
1,116,285	-		Shew_0972	0.15	-0.3
1,116,367	-		Shew_0972	0.21	+0.2
1,116,626	-		Shew_0972	0.41	-0.2
1,116,745	+		Shew_0972	0.49	-1.8
1,117,030	-		Shew_0972	0.70	+0.1
1,117,157	+		Shew_0972	0.80	+0.5
1,117,175	-		Shew_0972	0.81	+0.1
1,117,495	-				+0.1
1,117,612	-				+0.1
1,117,750	-				-0.9
1,117,835	+		Shew_0973	0.12	-1.9
1,118,054	+		Shew_0973	0.32	-1.6
1,118,112	+		Shew_0973	0.37	-0.9
1,118,129	+		Shew_0973	0.38	-1.0
1,118,199	-		Shew_0973	0.45	-2.0
1,118,232	+		Shew_0973	0.48	-1.5