Strain Fitness in Shewanella loihica PV-4 around Shew_0888

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
1,007,376	-		Shew_0887	0.12	-0.3
1,007,386	-		Shew_0887	0.14	-0.7
1,007,496	+		Shew_0887	0.25	+0.7
1,007,504	-		Shew_0887	0.26	-1.1
1,007,504	-		Shew_0887	0.26	-0.8
1,007,830	-		Shew_0887	0.60	+0.2
1,007,919	+		Shew_0887	0.69	-0.5
1,008,095	+		Shew_0887	0.88	+0.5
1,008,165	+				+0.1
1,008,173	-				-0.1
1,008,246	-				+0.4
1,008,403	+				+0.2
1,008,603	+		Shew_0888	0.23	-0.2
1,008,667	+		Shew_0888	0.29	-0.3
1,009,014	+		Shew_0888	0.58	+1.3
1,009,064	+		Shew_0888	0.62	-0.3
1,009,158	+		Shew_0888	0.70	+0.2
1,009,619	-				-0.0
1,009,935	-		Shew_0889	0.42	-0.2
1,010,060	+		Shew_0889	0.74	+0.3
1,010,505	+		Shew_0890	0.30	+0.0