Experiment: Doxycycline hyclate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0492 and Shew_0493 are separated by 161 nucleotides Shew_0493 and Shew_0494 are separated by 243 nucleotides Shew_0494 and Shew_0495 are separated by 184 nucleotides
Shew_0492: Shew_0492 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 548,543 to 550,135
_0492
Shew_0493: Shew_0493 - hypothetical protein (RefSeq), at 550,297 to 550,803
_0493
Shew_0494: Shew_0494 - hypothetical protein (RefSeq), at 551,047 to 551,799
_0494
Shew_0495: Shew_0495 - hypothetical protein (RefSeq), at 551,984 to 552,685
_0495
Position (kb) 551
552 Strain fitness (log2 ratio) -1
0
1 at 550.217 kb on - strand at 550.224 kb on + strand at 550.268 kb on - strand at 550.616 kb on + strand, within Shew_0493 at 550.616 kb on + strand, within Shew_0493 at 550.917 kb on + strand at 551.301 kb on + strand, within Shew_0494 at 551.302 kb on + strand, within Shew_0494 at 551.505 kb on + strand, within Shew_0494 at 551.722 kb on + strand, within Shew_0494 at 551.722 kb on + strand, within Shew_0494 at 551.871 kb on + strand at 551.871 kb on + strand at 551.879 kb on - strand at 551.879 kb on - strand at 552.284 kb on - strand, within Shew_0495 at 552.763 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Doxycycline hyclate 10 mg/ml remove 550,217 - +0.5 550,224 + -0.1 550,268 - +0.2 550,616 + Shew_0493 0.63 +0.1 550,616 + Shew_0493 0.63 +0.4 550,917 + +0.5 551,301 + Shew_0494 0.34 -0.1 551,302 + Shew_0494 0.34 +1.5 551,505 + Shew_0494 0.61 +0.2 551,722 + Shew_0494 0.90 +0.8 551,722 + Shew_0494 0.90 -0.0 551,871 + -0.0 551,871 + -0.2 551,879 - -0.0 551,879 - -0.2 552,284 - Shew_0495 0.43 +1.1 552,763 - -0.5
Or see this region's nucleotide sequence