Experiment: perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_733 and Pf6N2E2_734 are separated by 25 nucleotides Pf6N2E2_734 and Pf6N2E2_735 are separated by 277 nucleotides
Pf6N2E2_733 - Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8), at 840,991 to 841,959
_733
Pf6N2E2_734 - Molybdenum cofactor biosynthesis protein MoaA, at 841,985 to 842,977
_734
Pf6N2E2_735 - Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2), at 843,255 to 845,270
_735
Position (kb) 841
842
843 Strain fitness (log2 ratio) -1
0
1 at 841.246 kb on + strand, within Pf6N2E2_733 at 841.247 kb on - strand, within Pf6N2E2_733 at 841.454 kb on - strand, within Pf6N2E2_733 at 841.454 kb on - strand, within Pf6N2E2_733 at 841.454 kb on - strand, within Pf6N2E2_733 at 841.882 kb on + strand at 842.073 kb on - strand at 842.517 kb on - strand, within Pf6N2E2_734 at 842.684 kb on + strand, within Pf6N2E2_734 at 842.684 kb on + strand, within Pf6N2E2_734 at 842.684 kb on + strand, within Pf6N2E2_734 at 842.685 kb on - strand, within Pf6N2E2_734 at 842.975 kb on + strand at 842.981 kb on + strand at 842.981 kb on + strand at 842.981 kb on + strand at 842.981 kb on + strand at 843.088 kb on + strand at 843.088 kb on + strand at 843.088 kb on + strand at 843.088 kb on + strand at 843.089 kb on - strand at 843.128 kb on - strand at 843.128 kb on - strand at 843.233 kb on - strand at 843.234 kb on + strand at 843.234 kb on + strand at 843.235 kb on - strand at 843.235 kb on - strand at 843.235 kb on - strand at 843.238 kb on + strand at 843.238 kb on + strand at 843.238 kb on + strand at 843.238 kb on + strand at 843.239 kb on - strand at 843.239 kb on - strand at 843.239 kb on - strand at 843.239 kb on - strand at 843.239 kb on - strand at 843.239 kb on - strand at 843.285 kb on - strand at 843.519 kb on + strand, within Pf6N2E2_735 at 843.519 kb on + strand, within Pf6N2E2_735 at 843.519 kb on + strand, within Pf6N2E2_735 at 843.520 kb on - strand, within Pf6N2E2_735 at 843.520 kb on - strand, within Pf6N2E2_735 at 843.648 kb on + strand, within Pf6N2E2_735 at 843.676 kb on + strand, within Pf6N2E2_735 at 843.699 kb on + strand, within Pf6N2E2_735 at 843.699 kb on + strand, within Pf6N2E2_735 at 843.699 kb on + strand, within Pf6N2E2_735 at 843.700 kb on - strand, within Pf6N2E2_735 at 843.717 kb on + strand, within Pf6N2E2_735 at 843.717 kb on + strand, within Pf6N2E2_735 at 843.718 kb on - strand, within Pf6N2E2_735 at 843.718 kb on - strand, within Pf6N2E2_735 at 843.762 kb on - strand, within Pf6N2E2_735 at 843.967 kb on - strand, within Pf6N2E2_735 at 843.967 kb on - strand, within Pf6N2E2_735 at 843.967 kb on - strand, within Pf6N2E2_735 at 843.967 kb on - strand, within Pf6N2E2_735 at 843.967 kb on - strand, within Pf6N2E2_735
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 50 mM remove 841,246 + Pf6N2E2_733 0.26 +0.1 841,247 - Pf6N2E2_733 0.26 -0.5 841,454 - Pf6N2E2_733 0.48 -0.9 841,454 - Pf6N2E2_733 0.48 -0.5 841,454 - Pf6N2E2_733 0.48 -0.0 841,882 + +0.2 842,073 - -0.2 842,517 - Pf6N2E2_734 0.54 -0.1 842,684 + Pf6N2E2_734 0.70 -0.6 842,684 + Pf6N2E2_734 0.70 -0.6 842,684 + Pf6N2E2_734 0.70 -0.4 842,685 - Pf6N2E2_734 0.70 -0.8 842,975 + -0.4 842,981 + +0.1 842,981 + +0.0 842,981 + +0.1 842,981 + -0.1 843,088 + +0.0 843,088 + -0.4 843,088 + -1.1 843,088 + +1.1 843,089 - +0.0 843,128 - -0.4 843,128 - -0.5 843,233 - +0.4 843,234 + +0.1 843,234 + +0.2 843,235 - -0.4 843,235 - +0.0 843,235 - -0.4 843,238 + -0.1 843,238 + +1.0 843,238 + +0.3 843,238 + +0.7 843,239 - +0.5 843,239 - +0.0 843,239 - +0.5 843,239 - +0.1 843,239 - +0.0 843,239 - -0.7 843,285 - +0.4 843,519 + Pf6N2E2_735 0.13 +0.8 843,519 + Pf6N2E2_735 0.13 +0.1 843,519 + Pf6N2E2_735 0.13 -0.1 843,520 - Pf6N2E2_735 0.13 +0.4 843,520 - Pf6N2E2_735 0.13 -1.1 843,648 + Pf6N2E2_735 0.19 -0.2 843,676 + Pf6N2E2_735 0.21 +0.1 843,699 + Pf6N2E2_735 0.22 +0.3 843,699 + Pf6N2E2_735 0.22 -1.5 843,699 + Pf6N2E2_735 0.22 +0.2 843,700 - Pf6N2E2_735 0.22 +0.2 843,717 + Pf6N2E2_735 0.23 -0.1 843,717 + Pf6N2E2_735 0.23 -1.1 843,718 - Pf6N2E2_735 0.23 +0.0 843,718 - Pf6N2E2_735 0.23 -0.5 843,762 - Pf6N2E2_735 0.25 +0.5 843,967 - Pf6N2E2_735 0.35 +0.5 843,967 - Pf6N2E2_735 0.35 +0.2 843,967 - Pf6N2E2_735 0.35 +0.2 843,967 - Pf6N2E2_735 0.35 -1.1 843,967 - Pf6N2E2_735 0.35 -0.1
Or see this region's nucleotide sequence