Experiment: perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5242 and Pf6N2E2_5243 overlap by 9 nucleotides Pf6N2E2_5243 and Pf6N2E2_5244 are separated by 558 nucleotides Pf6N2E2_5244 and Pf6N2E2_5245 are separated by 205 nucleotides
Pf6N2E2_5242 - Malate:quinone oxidoreductase (EC 1.1.5.4), at 6,038,881 to 6,040,386
_5242
Pf6N2E2_5243 - hypothetical protein, at 6,040,378 to 6,040,566
_5243
Pf6N2E2_5244 - FIG00954931: hypothetical protein, at 6,041,125 to 6,041,358
_5244
Pf6N2E2_5245 - Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1), at 6,041,564 to 6,042,148
_5245
Position (kb)
6040
6041 Strain fitness (log2 ratio)
-1
0
1
2 at 6039.777 kb on - strand, within Pf6N2E2_5242 at 6039.950 kb on + strand, within Pf6N2E2_5242 at 6039.951 kb on - strand, within Pf6N2E2_5242 at 6039.951 kb on - strand, within Pf6N2E2_5242 at 6040.101 kb on - strand, within Pf6N2E2_5242 at 6040.101 kb on - strand, within Pf6N2E2_5242 at 6040.361 kb on - strand at 6040.428 kb on - strand, within Pf6N2E2_5243 at 6040.469 kb on - strand, within Pf6N2E2_5243 at 6040.564 kb on + strand at 6040.590 kb on - strand at 6040.694 kb on + strand at 6040.850 kb on - strand at 6040.850 kb on - strand at 6040.850 kb on - strand at 6040.892 kb on - strand at 6041.006 kb on - strand at 6041.051 kb on + strand at 6041.051 kb on + strand at 6041.051 kb on + strand at 6041.052 kb on - strand at 6041.052 kb on - strand at 6041.052 kb on - strand at 6041.053 kb on + strand at 6041.054 kb on - strand at 6041.054 kb on - strand at 6041.101 kb on + strand at 6041.346 kb on + strand at 6041.346 kb on + strand at 6041.346 kb on + strand at 6041.346 kb on + strand at 6041.405 kb on + strand at 6041.420 kb on + strand at 6041.420 kb on + strand at 6041.420 kb on + strand at 6041.420 kb on + strand at 6041.420 kb on + strand at 6041.421 kb on - strand at 6041.421 kb on - strand at 6041.421 kb on - strand at 6041.421 kb on - strand at 6041.481 kb on + strand at 6041.498 kb on + strand at 6041.498 kb on + strand at 6041.498 kb on + strand at 6041.499 kb on - strand at 6041.523 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 50 mM remove 6,039,777 - Pf6N2E2_5242 0.59 +2.0 6,039,950 + Pf6N2E2_5242 0.71 +1.8 6,039,951 - Pf6N2E2_5242 0.71 +2.5 6,039,951 - Pf6N2E2_5242 0.71 +2.1 6,040,101 - Pf6N2E2_5242 0.81 +1.7 6,040,101 - Pf6N2E2_5242 0.81 +0.1 6,040,361 - +1.9 6,040,428 - Pf6N2E2_5243 0.26 -0.8 6,040,469 - Pf6N2E2_5243 0.48 -1.0 6,040,564 + -0.6 6,040,590 - -0.8 6,040,694 + +0.7 6,040,850 - -0.1 6,040,850 - -0.3 6,040,850 - +1.4 6,040,892 - +0.6 6,041,006 - +0.6 6,041,051 + +1.2 6,041,051 + +0.6 6,041,051 + +0.8 6,041,052 - -0.1 6,041,052 - -0.0 6,041,052 - +0.7 6,041,053 + +0.8 6,041,054 - +0.6 6,041,054 - -0.0 6,041,101 + -1.0 6,041,346 + -0.0 6,041,346 + +0.2 6,041,346 + +0.2 6,041,346 + -0.2 6,041,405 + +0.0 6,041,420 + -0.5 6,041,420 + -0.6 6,041,420 + -0.4 6,041,420 + +0.4 6,041,420 + -0.1 6,041,421 - -0.5 6,041,421 - -1.2 6,041,421 - -1.2 6,041,421 - -0.3 6,041,481 + -0.1 6,041,498 + -0.6 6,041,498 + +0.3 6,041,498 + -0.1 6,041,499 - +0.3 6,041,523 - -0.2
Or see this region's nucleotide sequence