Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS08660

Experiment: formate N-free with 10mM Ammonium chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	formate N-free with 10mM Ammonium chloride
1,592,356	+		MMJJ_RS08650	0.58	-0.6
1,592,375	+		MMJJ_RS08650	0.61	-0.5
1,592,401	-		MMJJ_RS08650	0.65	-0.4
1,592,401	-		MMJJ_RS08650	0.65	-0.5
1,592,406	-		MMJJ_RS08650	0.66	-1.4
1,592,407	+		MMJJ_RS08650	0.66	-0.5
1,592,407	+		MMJJ_RS08650	0.66	-0.5
1,592,407	+		MMJJ_RS08650	0.66	-1.2
1,592,409	-		MMJJ_RS08650	0.66	-1.4
1,592,410	+		MMJJ_RS08650	0.67	+0.9
1,592,412	-		MMJJ_RS08650	0.67	-0.5
1,592,454	-		MMJJ_RS08650	0.73	-0.5
1,592,454	-		MMJJ_RS08650	0.73	-0.7
1,592,455	+		MMJJ_RS08650	0.73	-0.4
1,592,455	+		MMJJ_RS08650	0.73	+0.3
1,592,491	+		MMJJ_RS08650	0.79	-0.1
1,592,491	+		MMJJ_RS08650	0.79	-0.0
1,592,495	-		MMJJ_RS08650	0.80	+0.2
1,592,496	+		MMJJ_RS08650	0.80	-1.5
1,592,545	-		MMJJ_RS08650	0.87	-1.3
1,592,545	-		MMJJ_RS08650	0.87	-0.5
1,592,546	+		MMJJ_RS08650	0.88	+0.3
1,592,546	+		MMJJ_RS08650	0.88	+0.2
1,592,579	+				+0.0
1,592,595	-				-1.5
1,592,595	-				+0.5
1,592,613	-				-0.8
1,592,685	+		MMJJ_RS08655	0.11	-0.0
1,592,685	+		MMJJ_RS08655	0.11	-0.5
1,592,685	+		MMJJ_RS08655	0.11	-0.1
1,592,708	-		MMJJ_RS08655	0.15	+0.1
1,592,759	-		MMJJ_RS08655	0.24	+1.2
1,592,760	+		MMJJ_RS08655	0.24	+0.6
1,592,770	+		MMJJ_RS08655	0.26	+0.2
1,592,770	+		MMJJ_RS08655	0.26	-0.3
1,592,775	-		MMJJ_RS08655	0.27	+0.4
1,592,780	-		MMJJ_RS08655	0.27	+0.1
1,592,781	+		MMJJ_RS08655	0.28	+0.3
1,592,781	+		MMJJ_RS08655	0.28	-0.4
1,592,783	-		MMJJ_RS08655	0.28	-0.0
1,592,784	+		MMJJ_RS08655	0.28	-0.3
1,592,796	+		MMJJ_RS08655	0.30	+0.7
1,592,820	+		MMJJ_RS08655	0.34	-0.5
1,592,852	-		MMJJ_RS08655	0.40	-0.3
1,592,880	-		MMJJ_RS08655	0.45	+0.4
1,592,928	-		MMJJ_RS08655	0.53	-0.7
1,592,929	+		MMJJ_RS08655	0.53	+0.4
1,592,929	+		MMJJ_RS08655	0.53	+0.7
1,592,949	-		MMJJ_RS08655	0.57	+0.4
1,592,949	-		MMJJ_RS08655	0.57	-0.3
1,592,949	-		MMJJ_RS08655	0.57	+0.0
1,592,949	-		MMJJ_RS08655	0.57	+0.3
1,592,950	+		MMJJ_RS08655	0.57	-0.1
1,592,950	+		MMJJ_RS08655	0.57	-0.4
1,592,954	+		MMJJ_RS08655	0.58	-0.6
1,592,970	+		MMJJ_RS08655	0.60	+1.1
1,592,975	-		MMJJ_RS08655	0.61	+0.3
1,592,988	+		MMJJ_RS08655	0.64	-0.1
1,592,992	-		MMJJ_RS08655	0.64	-0.1
1,592,992	-		MMJJ_RS08655	0.64	-1.1
1,592,992	-		MMJJ_RS08655	0.64	-0.2
1,592,993	+		MMJJ_RS08655	0.64	-0.3
1,593,007	+		MMJJ_RS08655	0.67	-0.3
1,593,007	+		MMJJ_RS08655	0.67	-0.1
1,593,013	-		MMJJ_RS08655	0.68	+1.8
1,593,013	-		MMJJ_RS08655	0.68	-0.5
1,593,013	-		MMJJ_RS08655	0.68	-1.2
1,593,014	+		MMJJ_RS08655	0.68	-0.8
1,593,014	+		MMJJ_RS08655	0.68	-1.0
1,593,014	+		MMJJ_RS08655	0.68	+0.7
1,593,022	-		MMJJ_RS08655	0.69	-0.3
1,593,022	-		MMJJ_RS08655	0.69	+0.5
1,593,089	-		MMJJ_RS08655	0.81	-0.2
1,593,115	+		MMJJ_RS08655	0.86	+0.7
1,593,129	-		MMJJ_RS08655	0.88	-0.9
1,593,153	-				-0.1
1,593,155	-				-0.6
1,593,155	-				-0.4
1,593,174	-				-0.3
1,593,174	-				-2.1
1,593,174	-				-0.8
1,593,175	+				-0.4
1,593,176	-				+1.0
1,593,176	-				+0.6
1,593,201	+				+0.6
1,593,201	+				-0.8
1,593,201	+				-1.1
1,593,210	+				+0.3
1,593,210	+				-1.5
1,593,221	-				-0.1
1,593,221	-				-0.2
1,593,252	-				-0.0
1,593,269	-				-0.9
1,593,269	-				-0.3
1,593,270	+				+0.4
1,593,270	+				-1.1
1,593,290	-				-1.0
1,593,291	+				+0.5
1,593,291	+				+0.1
1,593,291	+				-0.1
1,593,313	+				-1.4
1,593,317	+				-0.1
1,593,594	-		MMJJ_RS08660	0.20	-1.8
1,593,619	-				-0.1
1,593,785	-		MMJJ_RS08660	0.36	-1.8
1,593,970	+		MMJJ_RS08660	0.52	-2.9
1,593,991	-		MMJJ_RS08660	0.54	-1.4
1,593,992	+		MMJJ_RS08660	0.54	-2.5
1,594,061	+		MMJJ_RS08660	0.60	-2.2
1,594,099	-		MMJJ_RS08660	0.63	-1.0
1,594,249	-		MMJJ_RS08660	0.75	-0.1
1,594,346	+		MMJJ_RS08660	0.84	-0.7
1,594,440	+				-1.8
1,594,495	-				+0.9
1,594,496	+				-2.5
1,594,496	+				-1.2
1,594,624	-				+0.2
1,594,625	+				-0.6
1,594,645	-				+0.6
1,594,648	+				-0.5
1,594,658	-				+0.9
1,594,659	+				+1.2
1,594,666	+				+1.0
1,594,667	-				+0.1
1,594,669	-				+0.3
1,594,669	-				-0.4
1,594,669	-				-0.1
1,594,669	-				+0.4
1,594,670	+				-0.3
1,594,670	+				-0.5
1,594,670	+				+0.7
1,594,670	+				+0.4
1,594,670	+				-0.9
1,594,670	+				-0.1
1,594,673	-				-0.5
1,594,674	+				-0.3
1,594,674	+				-0.6
1,594,674	+				-0.4
1,594,674	+				+0.0
1,594,674	+				-0.5
1,594,699	+				-0.2
1,594,699	+				-0.6
1,594,707	+				+0.5
1,594,712	+				-0.5
1,594,730	-				+0.3
1,594,734	-				-0.0
1,594,734	-				+0.0
1,594,734	-				+0.5
1,594,735	+				-0.7
1,594,735	+				-0.4
1,594,754	-				+0.3
1,594,756	-				-0.2
1,594,756	-				+0.5
1,594,756	-				-0.0
1,594,756	-				+0.1
1,594,757	+				-0.6
1,594,757	+				+0.1
1,594,763	-				-0.4
1,594,764	+				-0.0
1,594,777	-				+0.3
1,594,778	+				+1.9
1,594,840	+		MMJJ_RS08665	0.20	-0.5
1,594,843	-		MMJJ_RS08665	0.21	+0.8
1,594,843	-		MMJJ_RS08665	0.21	+0.5
1,594,843	-		MMJJ_RS08665	0.21	+0.1
1,594,843	-		MMJJ_RS08665	0.21	-0.9
1,594,844	+		MMJJ_RS08665	0.21	+0.1
1,594,844	+		MMJJ_RS08665	0.21	+0.9
1,594,844	+		MMJJ_RS08665	0.21	+0.2
1,594,844	+		MMJJ_RS08665	0.21	+0.8
1,594,844	+		MMJJ_RS08665	0.21	-0.1
1,594,844	+		MMJJ_RS08665	0.21	-0.5
1,594,844	+		MMJJ_RS08665	0.21	+0.4
1,594,844	+		MMJJ_RS08665	0.21	+0.0
1,594,845	-		MMJJ_RS08665	0.21	+0.7
1,594,845	-		MMJJ_RS08665	0.21	-0.0
1,594,845	-		MMJJ_RS08665	0.21	-0.7
1,594,845	-		MMJJ_RS08665	0.21	+0.3
1,594,845	-		MMJJ_RS08665	0.21	+0.2
1,594,846	+		MMJJ_RS08665	0.22	+0.2
1,594,846	+		MMJJ_RS08665	0.22	-0.0
1,594,846	+		MMJJ_RS08665	0.22	-0.3
1,594,849	-		MMJJ_RS08665	0.22	-1.0
1,594,849	-		MMJJ_RS08665	0.22	+0.0
1,594,857	-		MMJJ_RS08665	0.24	+0.5
1,594,857	-		MMJJ_RS08665	0.24	+0.1
1,594,858	+		MMJJ_RS08665	0.25	-0.5
1,594,858	+		MMJJ_RS08665	0.25	+0.7
1,594,862	-		MMJJ_RS08665	0.25	+0.9
1,594,862	-		MMJJ_RS08665	0.25	-0.1
1,594,868	-		MMJJ_RS08665	0.27	-0.1
1,594,900	-		MMJJ_RS08665	0.35	+2.4
1,594,900	-		MMJJ_RS08665	0.35	+0.4
1,594,900	-		MMJJ_RS08665	0.35	+0.4
1,594,900	-		MMJJ_RS08665	0.35	-0.5
1,594,901	+		MMJJ_RS08665	0.35	-0.6
1,594,903	+		MMJJ_RS08665	0.36	-0.3
1,594,934	-		MMJJ_RS08665	0.43	+0.9
1,594,934	-		MMJJ_RS08665	0.43	+0.0
1,594,935	+		MMJJ_RS08665	0.43	+0.3
1,594,938	-		MMJJ_RS08665	0.44	+0.4
1,594,938	-		MMJJ_RS08665	0.44	+0.9
1,594,938	-				-0.7
1,594,938	-		MMJJ_RS08665	0.44	+0.1
1,594,938	-		MMJJ_RS08665	0.44	+0.4
1,594,938	-		MMJJ_RS08665	0.44	+0.3
1,594,938	-		MMJJ_RS08665	0.44	-0.2
1,594,938	-		MMJJ_RS08665	0.44	+0.4
1,594,938	-		MMJJ_RS08665	0.44	+1.2
1,594,939	+		MMJJ_RS08665	0.44	-2.2
1,594,939	+		MMJJ_RS08665	0.44	-0.2
1,594,939	+		MMJJ_RS08665	0.44	+0.7
1,594,939	+		MMJJ_RS08665	0.44	-0.1
1,594,939	+		MMJJ_RS08665	0.44	+0.4
1,594,939	+		MMJJ_RS08665	0.44	-0.1
1,594,940	-		MMJJ_RS08665	0.45	-0.0
1,594,940	-		MMJJ_RS08665	0.45	-0.6
1,594,940	-		MMJJ_RS08665	0.45	+0.0
1,594,941	+		MMJJ_RS08665	0.45	-0.3
1,594,941	+		MMJJ_RS08665	0.45	+2.1
1,594,941	+		MMJJ_RS08665	0.45	+0.0
1,594,943	-		MMJJ_RS08665	0.45	+0.6
1,594,943	-		MMJJ_RS08665	0.45	+0.5
1,594,944	+		MMJJ_RS08665	0.46	-0.7
1,594,950	-		MMJJ_RS08665	0.47	+0.1
1,594,989	+		MMJJ_RS08665	0.57	+0.1
1,594,998	-		MMJJ_RS08665	0.59	-0.8
1,595,004	-		MMJJ_RS08665	0.60	+0.3
1,595,005	+		MMJJ_RS08665	0.61	+1.6
1,595,006	-		MMJJ_RS08665	0.61	-0.5
1,595,006	-		MMJJ_RS08665	0.61	+1.2
1,595,007	+		MMJJ_RS08665	0.61	-0.5
1,595,025	-		MMJJ_RS08665	0.65	+0.2
1,595,025	-		MMJJ_RS08665	0.65	+0.5
1,595,025	-		MMJJ_RS08665	0.65	+0.1
1,595,026	+		MMJJ_RS08665	0.66	+0.3
1,595,026	+		MMJJ_RS08665	0.66	+0.7
1,595,026	+		MMJJ_RS08665	0.66	+0.4
1,595,026	+		MMJJ_RS08665	0.66	+0.4
1,595,026	+		MMJJ_RS08665	0.66	-0.5
1,595,026	+		MMJJ_RS08665	0.66	-0.7
1,595,065	-		MMJJ_RS08665	0.75	-1.2
1,595,087	-		MMJJ_RS08665	0.81	+0.5
1,595,111	-		MMJJ_RS08665	0.87	-0.2
1,595,112	+		MMJJ_RS08665	0.87	-0.1
1,595,116	-		MMJJ_RS08665	0.88	+0.2
1,595,116	-		MMJJ_RS08665	0.88	-0.1
1,595,154	-				-0.3
1,595,155	+				+0.2
1,595,163	-				+0.7
1,595,196	+				+0.4
1,595,239	-		MMJJ_RS08670	0.11	-0.0
1,595,240	+		MMJJ_RS08670	0.11	-0.0
1,595,240	+		MMJJ_RS08670	0.11	-0.7
1,595,251	-		MMJJ_RS08670	0.13	-1.1
1,595,251	-		MMJJ_RS08670	0.13	-1.0
1,595,252	+		MMJJ_RS08670	0.13	-0.4
1,595,261	+		MMJJ_RS08670	0.14	-0.0
1,595,292	-		MMJJ_RS08670	0.19	-0.5
1,595,293	+		MMJJ_RS08670	0.19	+0.9
1,595,354	+		MMJJ_RS08670	0.27	+0.2
1,595,362	-		MMJJ_RS08670	0.28	+0.5
1,595,375	-		MMJJ_RS08670	0.30	+0.2
1,595,376	+		MMJJ_RS08670	0.30	+1.2
1,595,376	+		MMJJ_RS08670	0.30	-0.0
1,595,376	+		MMJJ_RS08670	0.30	-0.9
1,595,382	-		MMJJ_RS08670	0.31	-2.1
1,595,382	-		MMJJ_RS08670	0.31	+0.4
1,595,383	+		MMJJ_RS08670	0.31	+0.6
1,595,383	+		MMJJ_RS08670	0.31	+0.9
1,595,384	-		MMJJ_RS08670	0.32	+0.1
1,595,384	-		MMJJ_RS08670	0.32	-0.8
1,595,385	+		MMJJ_RS08670	0.32	+0.6
1,595,385	+		MMJJ_RS08670	0.32	+0.7
1,595,385	+		MMJJ_RS08670	0.32	+0.1
1,595,398	-		MMJJ_RS08670	0.34	-0.4
1,595,402	+		MMJJ_RS08670	0.34	-0.2
1,595,413	+		MMJJ_RS08670	0.36	-0.2
1,595,495	+		MMJJ_RS08670	0.47	+0.4