Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS07670

Experiment: formate N-free with 10mM Ammonium chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	formate N-free with 10mM Ammonium chloride
1,403,276	-		MMJJ_RS07665	0.53	-3.6
1,403,277	+		MMJJ_RS07665	0.53	-2.9
1,403,277	+		MMJJ_RS07665	0.53	-2.9
1,403,342	-		MMJJ_RS07665	0.57	-3.6
1,403,348	-		MMJJ_RS07665	0.57	-4.0
1,403,348	-		MMJJ_RS07665	0.57	-2.9
1,403,348	-		MMJJ_RS07665	0.57	-3.3
1,403,349	+		MMJJ_RS07665	0.57	-1.9
1,403,349	+		MMJJ_RS07665	0.57	-1.7
1,403,352	-		MMJJ_RS07665	0.57	-4.3
1,403,352	-		MMJJ_RS07665	0.57	-3.3
1,403,352	-		MMJJ_RS07665	0.57	-2.3
1,403,353	+		MMJJ_RS07665	0.57	-2.6
1,403,353	+		MMJJ_RS07665	0.57	-4.2
1,403,353	+		MMJJ_RS07665	0.57	-3.1
1,403,353	+		MMJJ_RS07665	0.57	-2.9
1,403,353	+		MMJJ_RS07665	0.57	-3.5
1,403,353	+		MMJJ_RS07665	0.57	-2.9
1,403,353	+		MMJJ_RS07665	0.57	-0.7
1,403,356	-		MMJJ_RS07665	0.57	-3.5
1,403,357	+		MMJJ_RS07665	0.57	-2.9
1,403,401	-		MMJJ_RS07665	0.60	-1.6
1,403,401	-		MMJJ_RS07665	0.60	-1.6
1,403,428	-		MMJJ_RS07665	0.61	-3.3
1,403,434	-		MMJJ_RS07665	0.61	-3.6
1,403,434	-		MMJJ_RS07665	0.61	-2.7
1,403,434	-		MMJJ_RS07665	0.61	-1.5
1,403,453	+		MMJJ_RS07665	0.62	-2.5
1,403,479	-		MMJJ_RS07665	0.63	-4.6
1,403,564	+		MMJJ_RS07665	0.68	-2.2
1,403,649	+		MMJJ_RS07665	0.72	-1.8
1,403,686	-		MMJJ_RS07665	0.74	-3.9
1,403,712	-		MMJJ_RS07665	0.75	-3.8
1,403,728	-		MMJJ_RS07665	0.76	-1.3
1,403,729	+		MMJJ_RS07665	0.76	-0.6
1,403,801	+		MMJJ_RS07665	0.79	-4.4
1,403,801	+		MMJJ_RS07665	0.79	-2.8
1,403,801	+		MMJJ_RS07665	0.79	-2.9
1,403,833	-		MMJJ_RS07665	0.81	-3.2
1,403,834	+		MMJJ_RS07665	0.81	-0.8
1,403,838	-		MMJJ_RS07665	0.81	-3.7
1,403,939	-		MMJJ_RS07665	0.86	-4.3
1,403,939	-		MMJJ_RS07665	0.86	-4.0
1,403,939	-		MMJJ_RS07665	0.86	-3.7
1,403,940	+		MMJJ_RS07665	0.86	-4.5
1,403,940	+		MMJJ_RS07665	0.86	-3.5
1,403,940	+		MMJJ_RS07665	0.86	-2.9
1,403,940	+		MMJJ_RS07665	0.86	-3.6
1,403,940	+		MMJJ_RS07665	0.86	-3.7
1,403,940	+		MMJJ_RS07665	0.86	-3.7
1,403,945	-		MMJJ_RS07665	0.86	-4.3
1,404,100	-				-4.6
1,404,100	-				-4.2
1,404,100	-				-3.7
1,404,100	-				-3.3
1,404,101	+				-3.7
1,404,101	+				-3.1
1,404,101	+				-3.3
1,404,105	+				-3.6
1,404,135	+				-3.5
1,404,184	+				-3.8
1,404,184	+				-3.4
1,404,190	-				-3.9
1,404,190	-				-3.1
1,404,190	-				-2.6
1,404,190	-				-4.2
1,404,191	+				-2.7
1,404,191	+				-2.6
1,404,239	-				-1.6
1,404,269	-				-3.0
1,404,269	-				-2.8
1,404,270	+				-3.5
1,404,272	-				-1.4
1,404,273	+				-1.8
1,404,273	+				-2.6
1,404,273	+				-0.9
1,404,273	+				-3.3
1,404,276	-				-3.2
1,404,276	-				-5.2
1,404,277	+				-4.6
1,404,328	-				-3.4
1,404,352	+				-3.1
1,404,352	+				-4.0
1,404,362	+				-2.3
1,404,362	+				-2.6
1,404,402	-		MMJJ_RS07670	0.13	-0.6
1,404,402	-		MMJJ_RS07670	0.13	-3.8
1,404,403	+		MMJJ_RS07670	0.13	-2.9
1,404,403	+		MMJJ_RS07670	0.13	-3.3
1,404,403	+		MMJJ_RS07670	0.13	-2.6
1,404,403	+		MMJJ_RS07670	0.13	-3.3
1,404,403	+		MMJJ_RS07670	0.13	-2.0
1,404,403	+		MMJJ_RS07670	0.13	-2.0
1,404,403	+		MMJJ_RS07670	0.13	-2.1
1,404,404	-		MMJJ_RS07670	0.13	-4.3
1,404,405	+		MMJJ_RS07670	0.13	-2.6
1,404,405	+		MMJJ_RS07670	0.13	-2.9
1,404,428	+		MMJJ_RS07670	0.15	-1.5
1,404,428	+		MMJJ_RS07670	0.15	-3.4
1,404,452	+		MMJJ_RS07670	0.17	-5.2
1,404,465	-		MMJJ_RS07670	0.18	-1.3
1,404,479	+		MMJJ_RS07670	0.19	-2.4
1,404,506	-		MMJJ_RS07670	0.22	-1.7
1,404,507	+		MMJJ_RS07670	0.22	-3.0
1,404,507	+		MMJJ_RS07670	0.22	-1.6
1,404,510	-		MMJJ_RS07670	0.22	-2.9
1,404,510	-		MMJJ_RS07670	0.22	-1.7
1,404,511	+		MMJJ_RS07670	0.22	-2.1
1,404,589	-		MMJJ_RS07670	0.29	-3.6
1,404,605	-		MMJJ_RS07670	0.30	-1.9
1,404,605	-		MMJJ_RS07670	0.30	-2.7
1,404,606	+		MMJJ_RS07670	0.30	-2.7
1,404,606	+		MMJJ_RS07670	0.30	-1.6
1,404,606	+		MMJJ_RS07670	0.30	-1.8
1,404,606	+		MMJJ_RS07670	0.30	-4.5
1,404,669	-		MMJJ_RS07670	0.36	-1.9
1,404,675	+		MMJJ_RS07670	0.36	-2.5
1,404,681	-		MMJJ_RS07670	0.37	-2.8
1,404,682	+		MMJJ_RS07670	0.37	-3.5
1,404,682	+		MMJJ_RS07670	0.37	-1.8
1,404,700	+		MMJJ_RS07670	0.38	-3.6
1,404,700	+		MMJJ_RS07670	0.38	-4.3
1,404,721	-		MMJJ_RS07670	0.40	-2.1
1,404,721	-		MMJJ_RS07670	0.40	-2.5
1,404,722	+		MMJJ_RS07670	0.40	-3.2
1,404,722	+				-1.0
1,404,727	-		MMJJ_RS07670	0.41	-1.6
1,404,728	+		MMJJ_RS07670	0.41	-1.3
1,404,728	+		MMJJ_RS07670	0.41	-4.6
1,404,729	-		MMJJ_RS07670	0.41	-3.0
1,404,805	+		MMJJ_RS07670	0.47	-4.3
1,404,847	-		MMJJ_RS07670	0.51	-4.4
1,404,893	-		MMJJ_RS07670	0.55	-2.3
1,404,894	+		MMJJ_RS07670	0.55	-1.6
1,404,894	+		MMJJ_RS07670	0.55	-2.2
1,404,895	-		MMJJ_RS07670	0.55	-5.0
1,404,909	-		MMJJ_RS07670	0.56	-4.8
1,404,910	+		MMJJ_RS07670	0.56	-3.6
1,404,959	-		MMJJ_RS07670	0.61	-2.7
1,404,959	-		MMJJ_RS07670	0.61	-4.0
1,404,962	+		MMJJ_RS07670	0.61	-3.3
1,405,093	-		MMJJ_RS07670	0.72	-1.9
1,405,094	+		MMJJ_RS07670	0.72	-2.0
1,405,106	+		MMJJ_RS07670	0.73	-3.8
1,405,106	+		MMJJ_RS07670	0.73	-5.5
1,405,112	+		MMJJ_RS07670	0.74	-3.3
1,405,114	+		MMJJ_RS07670	0.74	-2.1
1,405,129	-		MMJJ_RS07670	0.75	-2.9
1,405,130	+		MMJJ_RS07670	0.75	-4.6
1,405,137	-		MMJJ_RS07670	0.76	-1.0
1,405,137	-		MMJJ_RS07670	0.76	-1.2
1,405,137	-		MMJJ_RS07670	0.76	-1.8
1,405,137	-		MMJJ_RS07670	0.76	-1.1
1,405,138	+		MMJJ_RS07670	0.76	-4.2
1,405,138	+		MMJJ_RS07670	0.76	-3.5
1,405,138	+		MMJJ_RS07670	0.76	-4.0
1,405,138	+		MMJJ_RS07670	0.76	-3.3
1,405,138	+		MMJJ_RS07670	0.76	-3.4
1,405,138	+		MMJJ_RS07670	0.76	-2.2
1,405,147	+		MMJJ_RS07670	0.77	-5.0
1,405,172	+		MMJJ_RS07670	0.79	-2.8
1,405,231	-		MMJJ_RS07670	0.84	-2.6
1,405,261	+		MMJJ_RS07670	0.87	-3.4
1,405,284	-		MMJJ_RS07670	0.88	-3.9
1,405,284	-		MMJJ_RS07670	0.88	-4.3
1,405,285	+		MMJJ_RS07670	0.89	-3.6
1,405,285	+		MMJJ_RS07670	0.89	-3.5
1,405,285	+		MMJJ_RS07670	0.89	-2.3
1,405,285	+		MMJJ_RS07670	0.89	-3.2
1,405,314	-				+0.1
1,405,425	+				-0.2
1,405,428	+				+0.5
1,405,431	-				+0.6
1,405,470	+				+0.7
1,405,545	+				+0.2
1,405,596	+		MMJJ_RS07675	0.12	-0.8
1,405,604	-		MMJJ_RS07675	0.12	-0.3
1,405,622	+		MMJJ_RS07675	0.14	+0.5
1,405,622	+		MMJJ_RS07675	0.14	-1.1
1,405,742	-		MMJJ_RS07675	0.22	-0.4
1,405,743	+		MMJJ_RS07675	0.22	-1.5
1,405,743	+		MMJJ_RS07675	0.22	+0.2
1,405,767	-		MMJJ_RS07675	0.24	+1.6
1,405,767	-		MMJJ_RS07675	0.24	-0.6
1,405,767	-		MMJJ_RS07675	0.24	-0.6
1,405,767	-		MMJJ_RS07675	0.24	-1.0
1,405,768	+		MMJJ_RS07675	0.24	+0.7
1,405,768	+		MMJJ_RS07675	0.24	+0.1
1,405,772	-		MMJJ_RS07675	0.25	-0.1
1,405,772	-		MMJJ_RS07675	0.25	-0.9
1,405,773	+				-0.0
1,405,773	+		MMJJ_RS07675	0.25	+0.1
1,405,773	+		MMJJ_RS07675	0.25	-0.4
1,405,776	-		MMJJ_RS07675	0.25	-1.1
1,405,776	-		MMJJ_RS07675	0.25	-0.5
1,405,777	+		MMJJ_RS07675	0.25	+0.4
1,405,777	+		MMJJ_RS07675	0.25	-0.5
1,405,777	+		MMJJ_RS07675	0.25	-1.6
1,405,777	+		MMJJ_RS07675	0.25	-0.8
1,405,777	+		MMJJ_RS07675	0.25	-0.2
1,405,780	+		MMJJ_RS07675	0.25	-0.7
1,405,786	-		MMJJ_RS07675	0.26	-0.6
1,405,786	-		MMJJ_RS07675	0.26	-0.6
1,405,786	-		MMJJ_RS07675	0.26	-0.3
1,405,786	-		MMJJ_RS07675	0.26	-0.7
1,405,786	-		MMJJ_RS07675	0.26	-0.6
1,405,786	-		MMJJ_RS07675	0.26	-0.8
1,405,786	-		MMJJ_RS07675	0.26	-0.3
1,405,786	-		MMJJ_RS07675	0.26	+0.3
1,405,786	-		MMJJ_RS07675	0.26	-0.5
1,405,786	-		MMJJ_RS07675	0.26	-1.3
1,405,786	-		MMJJ_RS07675	0.26	+0.2
1,405,786	-		MMJJ_RS07675	0.26	-0.5
1,405,786	-		MMJJ_RS07675	0.26	+0.2
1,405,787	+		MMJJ_RS07675	0.26	+0.3
1,405,787	+		MMJJ_RS07675	0.26	-1.3
1,405,787	+		MMJJ_RS07675	0.26	-0.2
1,405,787	+		MMJJ_RS07675	0.26	-0.7
1,405,787	+		MMJJ_RS07675	0.26	+0.2
1,405,787	+		MMJJ_RS07675	0.26	-0.9
1,405,787	+				-0.6
1,405,787	+		MMJJ_RS07675	0.26	+0.8
1,405,791	+		MMJJ_RS07675	0.26	-0.3
1,405,805	-		MMJJ_RS07675	0.27	+0.6
1,405,806	+		MMJJ_RS07675	0.27	-1.3
1,405,826	-		MMJJ_RS07675	0.28	-0.1
1,405,826	-		MMJJ_RS07675	0.28	-0.1
1,405,827	+		MMJJ_RS07675	0.29	-0.2
1,405,859	+		MMJJ_RS07675	0.31	-0.5
1,405,883	-		MMJJ_RS07675	0.33	-0.2
1,405,884	+		MMJJ_RS07675	0.33	-1.7
1,405,884	+		MMJJ_RS07675	0.33	+0.2
1,405,884	+		MMJJ_RS07675	0.33	-0.1
1,405,898	-		MMJJ_RS07675	0.34	+0.7
1,405,898	-		MMJJ_RS07675	0.34	-0.8
1,405,899	+		MMJJ_RS07675	0.34	+0.1
1,405,899	+		MMJJ_RS07675	0.34	-0.3
1,405,899	+		MMJJ_RS07675	0.34	-0.0
1,405,911	+		MMJJ_RS07675	0.35	+1.1
1,405,911	+		MMJJ_RS07675	0.35	-0.3
1,406,079	+		MMJJ_RS07675	0.47	+0.4
1,406,079	+		MMJJ_RS07675	0.47	+0.1
1,406,236	-		MMJJ_RS07675	0.58	-0.4
1,406,237	+		MMJJ_RS07675	0.58	+0.8
1,406,259	+		MMJJ_RS07675	0.60	-1.1
1,406,259	+		MMJJ_RS07675	0.60	+0.1
1,406,261	+		MMJJ_RS07675	0.60	+0.8
1,406,323	-		MMJJ_RS07675	0.64	-0.7
1,406,408	+		MMJJ_RS07675	0.70	+0.6