Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS07665

Experiment: formate N-free with 10mM Ammonium chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	formate N-free with 10mM Ammonium chloride
1,401,203	-		MMJJ_RS07655	0.59	-0.0
1,401,203	-		MMJJ_RS07655	0.59	-3.2
1,401,215	-		MMJJ_RS07655	0.61	-2.1
1,401,241	+		MMJJ_RS07655	0.66	-1.8
1,401,260	-		MMJJ_RS07655	0.70	-1.4
1,401,261	+		MMJJ_RS07655	0.70	-2.3
1,401,261	+		MMJJ_RS07655	0.70	-2.8
1,401,310	+		MMJJ_RS07655	0.79	-2.9
1,401,314	-		MMJJ_RS07655	0.80	-2.6
1,401,314	-		MMJJ_RS07655	0.80	-1.8
1,401,315	+		MMJJ_RS07655	0.80	-3.8
1,401,315	+		MMJJ_RS07655	0.80	-1.6
1,401,315	+		MMJJ_RS07655	0.80	-3.8
1,401,315	+		MMJJ_RS07655	0.80	-1.6
1,401,315	+		MMJJ_RS07655	0.80	-1.6
1,401,315	+		MMJJ_RS07655	0.80	-3.1
1,401,332	-		MMJJ_RS07655	0.83	-2.7
1,401,333	+		MMJJ_RS07655	0.84	-1.4
1,401,333	+		MMJJ_RS07655	0.84	-4.3
1,401,336	-		MMJJ_RS07655	0.84	-2.2
1,401,360	+		MMJJ_RS07655	0.89	-2.5
1,401,388	+				-3.5
1,401,388	+				-3.3
1,401,392	-				-1.7
1,401,392	-				-3.1
1,401,392	-				-2.7
1,401,392	-				-2.8
1,401,393	+				-2.3
1,401,393	+				-1.2
1,401,394	-				-0.6
1,401,436	+				-3.5
1,401,438	+				-2.3
1,401,494	-		MMJJ_RS07660	0.12	-1.9
1,401,494	-		MMJJ_RS07660	0.12	-1.3
1,401,577	-		MMJJ_RS07660	0.30	-3.1
1,401,589	-		MMJJ_RS07660	0.33	-1.9
1,401,602	+		MMJJ_RS07660	0.36	-2.9
1,401,602	+		MMJJ_RS07660	0.36	-1.9
1,401,604	-		MMJJ_RS07660	0.36	-2.2
1,401,605	+		MMJJ_RS07660	0.36	-2.3
1,401,613	-		MMJJ_RS07660	0.38	-1.0
1,401,613	-		MMJJ_RS07660	0.38	-0.2
1,401,614	+		MMJJ_RS07660	0.38	-2.5
1,401,615	-		MMJJ_RS07660	0.38	-1.6
1,401,616	+		MMJJ_RS07660	0.39	-2.7
1,401,616	+		MMJJ_RS07660	0.39	-0.5
1,401,616	+		MMJJ_RS07660	0.39	-1.6
1,401,616	+		MMJJ_RS07660	0.39	-2.7
1,401,645	+		MMJJ_RS07660	0.45	-2.6
1,401,707	+		MMJJ_RS07660	0.59	-2.0
1,401,833	-		MMJJ_RS07660	0.87	-2.4
1,401,853	-				-1.8
1,401,853	-				-4.6
1,401,862	-				-3.6
1,401,863	+				-2.3
1,401,886	-				-3.0
1,401,941	+				-1.9
1,401,955	-				-1.1
1,401,956	+				-1.7
1,401,956	+				-2.5
1,401,960	+				-3.7
1,401,976	-				+0.4
1,401,976	-				-1.3
1,401,985	-				-3.2
1,401,986	+				-2.3
1,401,995	-				-1.5
1,401,996	+				-2.6
1,402,009	-				-3.0
1,402,009	-				-2.5
1,402,014	-				-3.6
1,402,017	-				-1.7
1,402,018	+				-3.2
1,402,018	+				-3.9
1,402,018	+				-2.3
1,402,019	-				-2.0
1,402,019	-				-2.4
1,402,019	-				-1.2
1,402,019	-				-4.1
1,402,020	+				-1.3
1,402,020	+				-2.7
1,402,020	+				-2.4
1,402,020	+				-3.0
1,402,020	+				-2.3
1,402,023	-				-2.2
1,402,023	-				-3.8
1,402,024	+				-1.8
1,402,024	+				-1.8
1,402,024	+				-3.0
1,402,024	+				-1.8
1,402,024	+				-2.2
1,402,027	-				-3.2
1,402,027	-				-2.5
1,402,027	-				-1.9
1,402,027	-				-1.6
1,402,027	-				-3.2
1,402,027	-				-2.1
1,402,027	-				-2.0
1,402,027	-				-1.8
1,402,027	-				-3.5
1,402,027	-				-2.8
1,402,028	+				-4.1
1,402,028	+				-1.7
1,402,028	+				-2.8
1,402,028	+				-3.6
1,402,028	+				-3.7
1,402,028	+				-0.0
1,402,029	-				-5.0
1,402,030	+				-1.3
1,402,030	+				-2.7
1,402,030	+				-1.8
1,402,033	-				-4.1
1,402,034	+				-2.2
1,402,050	-				-2.0
1,402,051	+				-0.8
1,402,063	-				-3.4
1,402,063	-				-2.3
1,402,063	-				-4.2
1,402,064	+				-3.5
1,402,078	-				-2.2
1,402,083	-				-1.8
1,402,083	-				-2.7
1,402,084	+				-3.9
1,402,084	+				-4.2
1,402,087	-				-3.7
1,402,093	-				-3.7
1,402,096	-				-1.6
1,402,168	-				-3.4
1,402,169	+				-1.5
1,402,170	-				-1.7
1,402,170	-				-1.4
1,402,170	-				-2.3
1,402,170	-				-1.2
1,402,171	+				-2.5
1,402,175	+				-3.2
1,402,177	+				-3.1
1,402,193	-				-4.4
1,402,201	-				-3.2
1,402,259	+				-2.3
1,402,296	+				-2.6
1,402,331	-				-3.5
1,402,331	-				-0.8
1,402,341	-				-4.0
1,402,341	-				-1.9
1,402,341	-				-2.6
1,402,342	+				-0.6
1,402,371	+				-3.4
1,402,371	+				-2.7
1,402,435	-		MMJJ_RS07665	0.12	-3.3
1,402,436	+		MMJJ_RS07665	0.12	-2.6
1,402,465	+		MMJJ_RS07665	0.13	-4.0
1,402,505	-		MMJJ_RS07665	0.15	-0.0
1,402,506	+		MMJJ_RS07665	0.15	-1.3
1,402,506	+		MMJJ_RS07665	0.15	-1.3
1,402,521	-		MMJJ_RS07665	0.16	-3.0
1,402,521	-		MMJJ_RS07665	0.16	-2.9
1,402,521	-		MMJJ_RS07665	0.16	-2.0
1,402,521	-		MMJJ_RS07665	0.16	-4.3
1,402,521	-		MMJJ_RS07665	0.16	-2.3
1,402,521	-		MMJJ_RS07665	0.16	-3.1
1,402,521	-		MMJJ_RS07665	0.16	-1.7
1,402,521	-		MMJJ_RS07665	0.16	-4.9
1,402,521	-		MMJJ_RS07665	0.16	-3.5
1,402,521	-		MMJJ_RS07665	0.16	-2.2
1,402,521	-		MMJJ_RS07665	0.16	-2.8
1,402,522	+		MMJJ_RS07665	0.16	-2.3
1,402,522	+		MMJJ_RS07665	0.16	-3.6
1,402,522	+		MMJJ_RS07665	0.16	-4.2
1,402,522	+		MMJJ_RS07665	0.16	-1.6
1,402,522	+		MMJJ_RS07665	0.16	-3.6
1,402,522	+		MMJJ_RS07665	0.16	-3.3
1,402,522	+		MMJJ_RS07665	0.16	-2.1
1,402,525	-		MMJJ_RS07665	0.16	-3.9
1,402,525	-		MMJJ_RS07665	0.16	-3.6
1,402,525	-		MMJJ_RS07665	0.16	-3.4
1,402,525	-		MMJJ_RS07665	0.16	-3.8
1,402,526	+		MMJJ_RS07665	0.16	-3.8
1,402,552	-		MMJJ_RS07665	0.18	-3.8
1,402,562	-		MMJJ_RS07665	0.18	-3.4
1,402,562	-		MMJJ_RS07665	0.18	-2.2
1,402,563	+		MMJJ_RS07665	0.18	-3.8
1,402,637	-		MMJJ_RS07665	0.22	-3.1
1,402,660	-		MMJJ_RS07665	0.23	-2.1
1,402,660	-		MMJJ_RS07665	0.23	-1.2
1,402,660	-		MMJJ_RS07665	0.23	-3.8
1,402,660	-		MMJJ_RS07665	0.23	-3.5
1,402,660	-		MMJJ_RS07665	0.23	-3.8
1,402,660	-		MMJJ_RS07665	0.23	-4.9
1,402,661	+		MMJJ_RS07665	0.23	-3.7
1,402,676	-		MMJJ_RS07665	0.24	-2.7
1,402,676	-		MMJJ_RS07665	0.24	-3.6
1,402,676	-		MMJJ_RS07665	0.24	-3.2
1,402,677	+		MMJJ_RS07665	0.24	-3.6
1,402,677	+		MMJJ_RS07665	0.24	-2.5
1,402,677	+		MMJJ_RS07665	0.24	-4.2
1,402,677	+		MMJJ_RS07665	0.24	-3.9
1,402,679	+		MMJJ_RS07665	0.24	-4.2
1,402,684	-		MMJJ_RS07665	0.24	-1.8
1,402,684	-		MMJJ_RS07665	0.24	-1.7
1,402,685	+		MMJJ_RS07665	0.24	-3.4
1,402,697	-		MMJJ_RS07665	0.25	-3.8
1,402,697	-		MMJJ_RS07665	0.25	-1.8
1,402,697	-		MMJJ_RS07665	0.25	-2.7
1,402,698	+		MMJJ_RS07665	0.25	-3.1
1,402,757	-		MMJJ_RS07665	0.28	-3.5
1,402,771	-		MMJJ_RS07665	0.28	-2.9
1,402,772	+		MMJJ_RS07665	0.29	-2.4
1,402,772	+		MMJJ_RS07665	0.29	-3.1
1,402,772	+		MMJJ_RS07665	0.29	-3.2
1,402,772	+		MMJJ_RS07665	0.29	-1.0
1,402,813	+		MMJJ_RS07665	0.31	-4.6
1,402,816	-		MMJJ_RS07665	0.31	-4.8
1,402,816	-		MMJJ_RS07665	0.31	-2.9
1,402,816	-		MMJJ_RS07665	0.31	-1.5
1,402,816	-		MMJJ_RS07665	0.31	-2.2
1,402,817	+		MMJJ_RS07665	0.31	-4.2
1,402,822	-		MMJJ_RS07665	0.31	-1.7
1,402,838	-		MMJJ_RS07665	0.32	-3.3
1,402,859	+		MMJJ_RS07665	0.33	-2.6
1,402,868	+		MMJJ_RS07665	0.33	-5.5
1,402,935	+		MMJJ_RS07665	0.37	-3.2
1,402,953	-		MMJJ_RS07665	0.37	-2.6
1,402,954	+		MMJJ_RS07665	0.38	-3.7
1,402,956	+		MMJJ_RS07665	0.38	-3.8
1,402,965	-		MMJJ_RS07665	0.38	-4.5
1,403,022	-		MMJJ_RS07665	0.41	-2.9
1,403,022	-		MMJJ_RS07665	0.41	-3.5
1,403,023	+		MMJJ_RS07665	0.41	-1.4
1,403,027	-		MMJJ_RS07665	0.41	-4.5
1,403,047	-		MMJJ_RS07665	0.42	-2.7
1,403,047	-		MMJJ_RS07665	0.42	-4.2
1,403,048	+		MMJJ_RS07665	0.42	-2.6
1,403,052	-		MMJJ_RS07665	0.42	-3.2
1,403,063	-		MMJJ_RS07665	0.43	-1.7
1,403,086	-		MMJJ_RS07665	0.44	-2.9
1,403,108	-		MMJJ_RS07665	0.45	-2.8
1,403,165	+		MMJJ_RS07665	0.48	-3.6
1,403,218	-		MMJJ_RS07665	0.51	-3.6
1,403,218	-		MMJJ_RS07665	0.51	-2.3
1,403,219	+		MMJJ_RS07665	0.51	-5.4
1,403,276	-		MMJJ_RS07665	0.53	-3.6
1,403,277	+		MMJJ_RS07665	0.53	-2.9
1,403,277	+		MMJJ_RS07665	0.53	-2.9
1,403,342	-		MMJJ_RS07665	0.57	-3.6
1,403,348	-		MMJJ_RS07665	0.57	-4.0
1,403,348	-		MMJJ_RS07665	0.57	-2.9
1,403,348	-		MMJJ_RS07665	0.57	-3.3
1,403,349	+		MMJJ_RS07665	0.57	-1.9
1,403,349	+		MMJJ_RS07665	0.57	-1.7
1,403,352	-		MMJJ_RS07665	0.57	-4.3
1,403,352	-		MMJJ_RS07665	0.57	-3.3
1,403,352	-		MMJJ_RS07665	0.57	-2.3
1,403,353	+		MMJJ_RS07665	0.57	-2.6
1,403,353	+		MMJJ_RS07665	0.57	-4.2
1,403,353	+		MMJJ_RS07665	0.57	-3.1
1,403,353	+		MMJJ_RS07665	0.57	-2.9
1,403,353	+		MMJJ_RS07665	0.57	-3.5
1,403,353	+		MMJJ_RS07665	0.57	-2.9
1,403,353	+		MMJJ_RS07665	0.57	-0.7
1,403,356	-		MMJJ_RS07665	0.57	-3.5
1,403,357	+		MMJJ_RS07665	0.57	-2.9
1,403,401	-		MMJJ_RS07665	0.60	-1.6
1,403,401	-		MMJJ_RS07665	0.60	-1.6
1,403,428	-		MMJJ_RS07665	0.61	-3.3
1,403,434	-		MMJJ_RS07665	0.61	-3.6
1,403,434	-		MMJJ_RS07665	0.61	-2.7
1,403,434	-		MMJJ_RS07665	0.61	-1.5
1,403,453	+		MMJJ_RS07665	0.62	-2.5
1,403,479	-		MMJJ_RS07665	0.63	-4.6
1,403,564	+		MMJJ_RS07665	0.68	-2.2
1,403,649	+		MMJJ_RS07665	0.72	-1.8
1,403,686	-		MMJJ_RS07665	0.74	-3.9
1,403,712	-		MMJJ_RS07665	0.75	-3.8
1,403,728	-		MMJJ_RS07665	0.76	-1.3
1,403,729	+		MMJJ_RS07665	0.76	-0.6
1,403,801	+		MMJJ_RS07665	0.79	-4.4
1,403,801	+		MMJJ_RS07665	0.79	-2.8
1,403,801	+		MMJJ_RS07665	0.79	-2.9
1,403,833	-		MMJJ_RS07665	0.81	-3.2
1,403,834	+		MMJJ_RS07665	0.81	-0.8
1,403,838	-		MMJJ_RS07665	0.81	-3.7
1,403,939	-		MMJJ_RS07665	0.86	-4.3
1,403,939	-		MMJJ_RS07665	0.86	-4.0
1,403,939	-		MMJJ_RS07665	0.86	-3.7
1,403,940	+		MMJJ_RS07665	0.86	-4.5
1,403,940	+		MMJJ_RS07665	0.86	-3.5
1,403,940	+		MMJJ_RS07665	0.86	-2.9
1,403,940	+		MMJJ_RS07665	0.86	-3.6
1,403,940	+		MMJJ_RS07665	0.86	-3.7
1,403,940	+		MMJJ_RS07665	0.86	-3.7
1,403,945	-		MMJJ_RS07665	0.86	-4.3
1,404,100	-				-4.6
1,404,100	-				-4.2
1,404,100	-				-3.7
1,404,100	-				-3.3
1,404,101	+				-3.7
1,404,101	+				-3.1
1,404,101	+				-3.3
1,404,105	+				-3.6
1,404,135	+				-3.5
1,404,184	+				-3.8
1,404,184	+				-3.4
1,404,190	-				-3.9
1,404,190	-				-3.1
1,404,190	-				-2.6
1,404,190	-				-4.2
1,404,191	+				-2.7
1,404,191	+				-2.6
1,404,239	-				-1.6
1,404,269	-				-3.0
1,404,269	-				-2.8
1,404,270	+				-3.5
1,404,272	-				-1.4
1,404,273	+				-1.8
1,404,273	+				-2.6
1,404,273	+				-0.9
1,404,273	+				-3.3
1,404,276	-				-3.2
1,404,276	-				-5.2
1,404,277	+				-4.6
1,404,328	-				-3.4
1,404,352	+				-3.1
1,404,352	+				-4.0
1,404,362	+				-2.3
1,404,362	+				-2.6
1,404,402	-		MMJJ_RS07670	0.13	-0.6
1,404,402	-		MMJJ_RS07670	0.13	-3.8
1,404,403	+		MMJJ_RS07670	0.13	-2.9
1,404,403	+		MMJJ_RS07670	0.13	-3.3
1,404,403	+		MMJJ_RS07670	0.13	-2.6
1,404,403	+		MMJJ_RS07670	0.13	-3.3
1,404,403	+		MMJJ_RS07670	0.13	-2.0
1,404,403	+		MMJJ_RS07670	0.13	-2.0
1,404,403	+		MMJJ_RS07670	0.13	-2.1
1,404,404	-		MMJJ_RS07670	0.13	-4.3
1,404,405	+		MMJJ_RS07670	0.13	-2.6
1,404,405	+		MMJJ_RS07670	0.13	-2.9
1,404,428	+		MMJJ_RS07670	0.15	-1.5
1,404,428	+		MMJJ_RS07670	0.15	-3.4
1,404,452	+		MMJJ_RS07670	0.17	-5.2
1,404,465	-		MMJJ_RS07670	0.18	-1.3
1,404,479	+		MMJJ_RS07670	0.19	-2.4
1,404,506	-		MMJJ_RS07670	0.22	-1.7
1,404,507	+		MMJJ_RS07670	0.22	-3.0
1,404,507	+		MMJJ_RS07670	0.22	-1.6
1,404,510	-		MMJJ_RS07670	0.22	-2.9
1,404,510	-		MMJJ_RS07670	0.22	-1.7
1,404,511	+		MMJJ_RS07670	0.22	-2.1
1,404,589	-		MMJJ_RS07670	0.29	-3.6
1,404,605	-		MMJJ_RS07670	0.30	-1.9
1,404,605	-		MMJJ_RS07670	0.30	-2.7
1,404,606	+		MMJJ_RS07670	0.30	-2.7
1,404,606	+		MMJJ_RS07670	0.30	-1.6
1,404,606	+		MMJJ_RS07670	0.30	-1.8
1,404,606	+		MMJJ_RS07670	0.30	-4.5
1,404,669	-		MMJJ_RS07670	0.36	-1.9
1,404,675	+		MMJJ_RS07670	0.36	-2.5
1,404,681	-		MMJJ_RS07670	0.37	-2.8
1,404,682	+		MMJJ_RS07670	0.37	-3.5
1,404,682	+		MMJJ_RS07670	0.37	-1.8
1,404,700	+		MMJJ_RS07670	0.38	-3.6
1,404,700	+		MMJJ_RS07670	0.38	-4.3
1,404,721	-		MMJJ_RS07670	0.40	-2.1
1,404,721	-		MMJJ_RS07670	0.40	-2.5
1,404,722	+		MMJJ_RS07670	0.40	-3.2
1,404,722	+				-1.0
1,404,727	-		MMJJ_RS07670	0.41	-1.6
1,404,728	+		MMJJ_RS07670	0.41	-1.3
1,404,728	+		MMJJ_RS07670	0.41	-4.6
1,404,729	-		MMJJ_RS07670	0.41	-3.0
1,404,805	+		MMJJ_RS07670	0.47	-4.3
1,404,847	-		MMJJ_RS07670	0.51	-4.4
1,404,893	-		MMJJ_RS07670	0.55	-2.3
1,404,894	+		MMJJ_RS07670	0.55	-1.6
1,404,894	+		MMJJ_RS07670	0.55	-2.2
1,404,895	-		MMJJ_RS07670	0.55	-5.0
1,404,909	-		MMJJ_RS07670	0.56	-4.8
1,404,910	+		MMJJ_RS07670	0.56	-3.6
1,404,959	-		MMJJ_RS07670	0.61	-2.7
1,404,959	-		MMJJ_RS07670	0.61	-4.0
1,404,962	+		MMJJ_RS07670	0.61	-3.3
1,405,093	-		MMJJ_RS07670	0.72	-1.9
1,405,094	+		MMJJ_RS07670	0.72	-2.0
1,405,106	+		MMJJ_RS07670	0.73	-3.8
1,405,106	+		MMJJ_RS07670	0.73	-5.5
1,405,112	+		MMJJ_RS07670	0.74	-3.3
1,405,114	+		MMJJ_RS07670	0.74	-2.1
1,405,129	-		MMJJ_RS07670	0.75	-2.9
1,405,130	+		MMJJ_RS07670	0.75	-4.6
1,405,137	-		MMJJ_RS07670	0.76	-1.0
1,405,137	-		MMJJ_RS07670	0.76	-1.2
1,405,137	-		MMJJ_RS07670	0.76	-1.8
1,405,137	-		MMJJ_RS07670	0.76	-1.1
1,405,138	+		MMJJ_RS07670	0.76	-4.2
1,405,138	+		MMJJ_RS07670	0.76	-3.5
1,405,138	+		MMJJ_RS07670	0.76	-4.0
1,405,138	+		MMJJ_RS07670	0.76	-3.3
1,405,138	+		MMJJ_RS07670	0.76	-3.4
1,405,138	+		MMJJ_RS07670	0.76	-2.2
1,405,147	+		MMJJ_RS07670	0.77	-5.0
1,405,172	+		MMJJ_RS07670	0.79	-2.8