Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS07640

Experiment: formate N-free with 10mM Ammonium chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	formate N-free with 10mM Ammonium chloride
1,396,446	-		MMJJ_RS07630	0.75	-0.8
1,396,447	+		MMJJ_RS07630	0.75	+0.3
1,396,598	+		MMJJ_RS07630	0.85	+0.1
1,396,638	-		MMJJ_RS07630	0.88	-0.1
1,396,776	-				-0.8
1,396,776	-				+0.3
1,396,825	+				+1.4
1,396,825	+				+0.3
1,396,829	+				-1.8
1,396,831	-				-0.8
1,396,857	+				+0.1
1,396,862	-				+0.0
1,396,863	+				-0.1
1,396,864	-				-2.3
1,396,864	-				+0.5
1,396,865	+				+0.7
1,396,865	+				+0.8
1,396,866	-				+0.9
1,396,866	-				-1.9
1,396,867	+				+0.4
1,396,867	+				+0.7
1,396,867	+				+0.5
1,396,875	-				+0.0
1,396,886	-				-0.5
1,396,886	-				+0.1
1,396,886	-				-0.7
1,396,887	+				+0.2
1,396,889	-				+0.6
1,396,889	-				+0.0
1,396,890	+				-0.3
1,396,891	-				+0.4
1,396,892	+				-0.3
1,396,892	+				+0.6
1,396,913	-				+0.3
1,396,913	-				+0.7
1,396,918	-				+0.9
1,396,918	-				-0.2
1,396,918	-				-0.2
1,396,918	-				+0.4
1,396,919	+				+0.4
1,396,919	+				+2.6
1,396,919	+				+0.3
1,396,930	+				+1.1
1,396,930	+				-0.5
1,396,930	+				+0.7
1,396,930	+				+0.5
1,396,930	+				+0.2
1,396,930	+				-0.5
1,396,933	-				+1.6
1,396,933	-				+0.9
1,396,934	+				-0.0
1,396,987	-				-0.6
1,396,991	+				+0.4
1,396,996	+				+0.1
1,396,996	+				-1.7
1,396,996	+				-0.7
1,397,032	-				-1.7
1,397,035	-				-3.2
1,397,035	-				-1.9
1,397,054	-				-0.8
1,397,054	-				-1.6
1,397,055	+		MMJJ_RS07635	0.10	-1.6
1,397,055	+		MMJJ_RS07635	0.10	-2.9
1,397,055	+		MMJJ_RS07635	0.10	-2.4
1,397,056	-		MMJJ_RS07635	0.10	-2.8
1,397,056	-		MMJJ_RS07635	0.10	-1.5
1,397,057	+		MMJJ_RS07635	0.11	-2.0
1,397,057	+		MMJJ_RS07635	0.11	-0.6
1,397,059	-		MMJJ_RS07635	0.11	-1.2
1,397,060	+		MMJJ_RS07635	0.11	-0.6
1,397,075	-		MMJJ_RS07635	0.16	-2.0
1,397,088	+		MMJJ_RS07635	0.19	-2.0
1,397,091	+		MMJJ_RS07635	0.20	-2.2
1,397,094	-		MMJJ_RS07635	0.21	-1.3
1,397,094	-		MMJJ_RS07635	0.21	-1.8
1,397,094	-		MMJJ_RS07635	0.21	-0.7
1,397,095	+		MMJJ_RS07635	0.21	-2.4
1,397,103	+		MMJJ_RS07635	0.23	-1.9
1,397,103	+		MMJJ_RS07635	0.23	-1.6
1,397,103	+		MMJJ_RS07635	0.23	-2.0
1,397,160	+		MMJJ_RS07635	0.39	-2.3
1,397,164	-		MMJJ_RS07635	0.40	-2.0
1,397,174	-		MMJJ_RS07635	0.43	-2.4
1,397,206	-		MMJJ_RS07635	0.52	-1.4
1,397,211	+		MMJJ_RS07635	0.53	-1.2
1,397,216	-		MMJJ_RS07635	0.55	-1.3
1,397,229	-		MMJJ_RS07635	0.58	-0.8
1,397,235	+		MMJJ_RS07635	0.60	+1.0
1,397,292	+		MMJJ_RS07635	0.76	-1.3
1,397,317	-		MMJJ_RS07635	0.83	-2.3
1,397,318	+		MMJJ_RS07635	0.83	-3.2
1,397,342	+		MMJJ_RS07635	0.90	-0.9
1,397,383	-				-1.9
1,397,450	+				-3.6
1,397,473	-				-1.8
1,397,474	+				-4.5
1,397,474	+				-0.6
1,397,582	+				-2.3
1,397,618	-		MMJJ_RS07640	0.11	-0.8
1,397,618	-		MMJJ_RS07640	0.11	-1.4
1,397,619	+		MMJJ_RS07640	0.11	-2.6
1,397,622	-		MMJJ_RS07640	0.11	-1.6
1,397,622	-		MMJJ_RS07640	0.11	-2.6
1,397,622	-		MMJJ_RS07640	0.11	-2.1
1,397,623	+		MMJJ_RS07640	0.11	-2.2
1,397,623	+		MMJJ_RS07640	0.11	-0.6
1,397,624	-		MMJJ_RS07640	0.11	-1.1
1,397,652	+		MMJJ_RS07640	0.13	-1.4
1,397,669	-		MMJJ_RS07640	0.14	-2.2
1,397,696	+		MMJJ_RS07640	0.15	-2.3
1,397,709	+		MMJJ_RS07640	0.16	-3.0
1,397,709	+		MMJJ_RS07640	0.16	-2.0
1,397,796	-		MMJJ_RS07640	0.20	-1.3
1,397,837	-		MMJJ_RS07640	0.22	-3.1
1,397,837	-		MMJJ_RS07640	0.22	-1.7
1,397,838	+		MMJJ_RS07640	0.23	-1.7
1,397,838	+		MMJJ_RS07640	0.23	-2.3
1,397,846	+		MMJJ_RS07640	0.23	-2.8
1,397,869	-		MMJJ_RS07640	0.24	-1.4
1,397,870	+		MMJJ_RS07640	0.24	-1.8
1,397,900	-		MMJJ_RS07640	0.26	-2.0
1,397,908	-		MMJJ_RS07640	0.26	-3.0
1,397,909	+		MMJJ_RS07640	0.26	-1.9
1,397,927	-		MMJJ_RS07640	0.27	-1.8
1,397,927	-		MMJJ_RS07640	0.27	-1.8
1,397,928	+		MMJJ_RS07640	0.27	-0.7
1,397,929	-		MMJJ_RS07640	0.27	-2.0
1,397,929	-		MMJJ_RS07640	0.27	-2.9
1,397,972	+		MMJJ_RS07640	0.29	-3.3
1,397,975	-		MMJJ_RS07640	0.30	-2.7
1,397,975	-		MMJJ_RS07640	0.30	-1.6
1,397,975	-		MMJJ_RS07640	0.30	-2.0
1,397,975	-		MMJJ_RS07640	0.30	-2.9
1,397,976	+		MMJJ_RS07640	0.30	-2.2
1,397,976	+		MMJJ_RS07640	0.30	-1.6
1,397,976	+		MMJJ_RS07640	0.30	-2.5
1,397,977	-		MMJJ_RS07640	0.30	-2.5
1,397,977	-				-0.6
1,397,978	+		MMJJ_RS07640	0.30	-0.4
1,397,978	+		MMJJ_RS07640	0.30	-2.0
1,398,007	-		MMJJ_RS07640	0.31	-3.8
1,398,008	+		MMJJ_RS07640	0.31	-2.7
1,398,008	+		MMJJ_RS07640	0.31	-1.6
1,398,008	+		MMJJ_RS07640	0.31	-3.9
1,398,037	-		MMJJ_RS07640	0.33	-1.4
1,398,054	+		MMJJ_RS07640	0.34	-2.3
1,398,090	+		MMJJ_RS07640	0.36	-2.0
1,398,122	-		MMJJ_RS07640	0.37	-4.0
1,398,123	+		MMJJ_RS07640	0.37	-2.1
1,398,126	+		MMJJ_RS07640	0.38	-1.3
1,398,210	-		MMJJ_RS07640	0.42	-1.6
1,398,232	-		MMJJ_RS07640	0.43	-1.9
1,398,233	+		MMJJ_RS07640	0.43	-1.6
1,398,255	-		MMJJ_RS07640	0.44	-1.3
1,398,266	+		MMJJ_RS07640	0.45	-2.5
1,398,266	+		MMJJ_RS07640	0.45	-2.0
1,398,267	-		MMJJ_RS07640	0.45	-0.5
1,398,267	-		MMJJ_RS07640	0.45	-6.0
1,398,289	-		MMJJ_RS07640	0.46	-2.8
1,398,290	+		MMJJ_RS07640	0.46	-1.8
1,398,304	-		MMJJ_RS07640	0.47	-2.0
1,398,348	+		MMJJ_RS07640	0.49	-2.7
1,398,364	-		MMJJ_RS07640	0.50	-2.5
1,398,385	-		MMJJ_RS07640	0.51	-1.6
1,398,386	+		MMJJ_RS07640	0.51	+1.3
1,398,395	+		MMJJ_RS07640	0.52	-1.8
1,398,395	+		MMJJ_RS07640	0.52	-1.8
1,398,405	-		MMJJ_RS07640	0.52	-2.6
1,398,405	-		MMJJ_RS07640	0.52	-1.4
1,398,405	-		MMJJ_RS07640	0.52	-1.4
1,398,406	+		MMJJ_RS07640	0.52	-1.1
1,398,406	+		MMJJ_RS07640	0.52	-0.9
1,398,406	+		MMJJ_RS07640	0.52	-1.7
1,398,406	+		MMJJ_RS07640	0.52	-1.6
1,398,406	+		MMJJ_RS07640	0.52	-1.3
1,398,410	-		MMJJ_RS07640	0.52	-1.2
1,398,411	+		MMJJ_RS07640	0.52	-4.3
1,398,412	-		MMJJ_RS07640	0.52	-1.6
1,398,412	-		MMJJ_RS07640	0.52	-1.9
1,398,413	+		MMJJ_RS07640	0.52	-1.0
1,398,424	-		MMJJ_RS07640	0.53	-2.2
1,398,425	+		MMJJ_RS07640	0.53	-1.2
1,398,427	-		MMJJ_RS07640	0.53	-1.5
1,398,427	-		MMJJ_RS07640	0.53	-2.0
1,398,446	+		MMJJ_RS07640	0.54	-2.6
1,398,467	+		MMJJ_RS07640	0.55	-2.5
1,398,467	+		MMJJ_RS07640	0.55	-3.4
1,398,470	-		MMJJ_RS07640	0.55	-1.9
1,398,470	-		MMJJ_RS07640	0.55	-1.7
1,398,471	+		MMJJ_RS07640	0.55	-2.3
1,398,471	+		MMJJ_RS07640	0.55	-0.2
1,398,480	-		MMJJ_RS07640	0.56	-2.6
1,398,481	+		MMJJ_RS07640	0.56	-1.9
1,398,481	+		MMJJ_RS07640	0.56	-2.6
1,398,494	-		MMJJ_RS07640	0.57	-1.5
1,398,494	-		MMJJ_RS07640	0.57	-1.6
1,398,494	-		MMJJ_RS07640	0.57	-3.0
1,398,563	-		MMJJ_RS07640	0.60	-4.2
1,398,612	-		MMJJ_RS07640	0.63	-2.1
1,398,612	-		MMJJ_RS07640	0.63	-3.2
1,398,613	+		MMJJ_RS07640	0.63	-2.5
1,398,623	+		MMJJ_RS07640	0.63	-1.6
1,398,641	+				-1.8
1,398,653	+		MMJJ_RS07640	0.65	-1.6
1,398,653	+		MMJJ_RS07640	0.65	-2.5
1,398,689	-		MMJJ_RS07640	0.67	-2.0
1,398,689	-		MMJJ_RS07640	0.67	-2.5
1,398,689	-		MMJJ_RS07640	0.67	-1.6
1,398,689	-		MMJJ_RS07640	0.67	-2.1
1,398,698	+		MMJJ_RS07640	0.67	-2.3
1,398,706	+		MMJJ_RS07640	0.68	-0.4
1,398,737	-		MMJJ_RS07640	0.69	-2.6
1,398,737	-		MMJJ_RS07640	0.69	-1.9
1,398,738	+		MMJJ_RS07640	0.69	-1.8
1,398,742	-		MMJJ_RS07640	0.70	-2.4
1,398,742	-		MMJJ_RS07640	0.70	-2.2
1,398,742	-		MMJJ_RS07640	0.70	-1.7
1,398,742	-		MMJJ_RS07640	0.70	-2.1
1,398,743	+		MMJJ_RS07640	0.70	-4.4
1,398,790	-		MMJJ_RS07640	0.72	-1.6
1,398,791	+		MMJJ_RS07640	0.72	-2.1
1,398,797	-		MMJJ_RS07640	0.72	-0.3
1,398,835	-		MMJJ_RS07640	0.74	-1.1
1,398,871	-		MMJJ_RS07640	0.76	-1.5
1,398,890	+		MMJJ_RS07640	0.77	-1.0
1,398,890	+		MMJJ_RS07640	0.77	-1.9
1,398,898	-		MMJJ_RS07640	0.78	-2.1
1,398,898	-		MMJJ_RS07640	0.78	-2.0
1,398,899	+		MMJJ_RS07640	0.78	-4.1
1,398,899	+		MMJJ_RS07640	0.78	-0.5
1,398,963	+		MMJJ_RS07640	0.81	-2.3
1,398,963	+		MMJJ_RS07640	0.81	-1.4
1,398,968	-		MMJJ_RS07640	0.81	-0.9
1,399,061	+		MMJJ_RS07640	0.86	-2.0
1,399,073	+		MMJJ_RS07640	0.87	-3.0
1,399,093	-		MMJJ_RS07640	0.88	-2.0
1,399,119	+		MMJJ_RS07640	0.89	-0.4
1,399,119	+		MMJJ_RS07640	0.89	-2.1
1,399,144	-				-0.9
1,399,158	-				-1.9
1,399,221	+				-0.9
1,399,283	-				-3.0
1,399,283	-				-1.8
1,399,323	-				+0.1
1,399,329	+				+0.8
1,399,333	-				+0.2
1,399,333	-				+0.9
1,399,337	+				+0.6
1,399,380	-				+0.1
1,399,381	+				-1.8
1,399,434	-				+0.2
1,399,446	-				+0.6
1,399,468	-				-0.7
1,399,469	+				+0.0
1,399,470	-				-0.1
1,399,470	-				-0.6
1,399,471	+				+0.1
1,399,471	+				+0.1
1,399,471	+				+0.6
1,399,471	+				-0.5
1,399,472	-				+1.0
1,399,472	-				+0.3
1,399,472	-				-2.2
1,399,473	+				+0.1
1,399,473	+				+1.8
1,399,473	+				-1.1
1,399,473	+				-0.1
1,399,474	-				-0.6
1,399,474	-				-0.8
1,399,475	+				-0.8
1,399,475	+				+0.3
1,399,493	+				-0.3
1,399,494	-				+0.1
1,399,494	-				-0.1
1,399,495	+				-0.5
1,399,517	-				+0.2
1,399,517	-				-0.6
1,399,517	-				+0.7
1,399,517	-				-1.0
1,399,517	-				-0.3
1,399,517	-				-0.1
1,399,517	-				-0.4
1,399,518	+				-0.0
1,399,518	+				+0.8
1,399,518	+				+0.3
1,399,518	+				+0.6
1,399,518	+				+0.3
1,399,519	-				+0.1
1,399,519	-				+1.2
1,399,519	-				-0.8
1,399,519	-				-0.2
1,399,519	-				+0.3
1,399,519	-				+0.2
1,399,519	-				+0.4
1,399,519	-				+0.0
1,399,520	+				+0.1
1,399,520	+				-0.4
1,399,520	+				-0.2
1,399,520	+				-1.5
1,399,520	+				+0.9
1,399,520	+				-0.9
1,399,520	+				+0.9
1,399,520	+				-0.7
1,399,520	+				-0.3
1,399,521	-				+0.5
1,399,521	-				+0.7
1,399,521	-				-0.4
1,399,521	-				-0.1
1,399,522	+				+0.1
1,399,522	+				+0.1
1,399,522	+				+0.4
1,399,522	+				-0.4
1,399,522	+				+0.1
1,399,558	+				+0.2
1,399,561	-		MMJJ_RS07645	0.11	-0.4
1,399,562	+		MMJJ_RS07645	0.11	-0.2
1,399,562	+		MMJJ_RS07645	0.11	-1.0
1,399,564	-		MMJJ_RS07645	0.12	+0.1
1,399,564	-		MMJJ_RS07645	0.12	-0.2
1,399,564	-		MMJJ_RS07645	0.12	+0.0
1,399,596	+		MMJJ_RS07645	0.25	+0.1
1,399,598	-		MMJJ_RS07645	0.26	-0.0
1,399,598	-		MMJJ_RS07645	0.26	+0.0
1,399,598	-		MMJJ_RS07645	0.26	+1.0
1,399,598	-		MMJJ_RS07645	0.26	-1.5
1,399,598	-		MMJJ_RS07645	0.26	+0.3
1,399,598	-		MMJJ_RS07645	0.26	-0.4
1,399,598	-		MMJJ_RS07645	0.26	-0.0
1,399,598	-		MMJJ_RS07645	0.26	-0.4
1,399,599	+		MMJJ_RS07645	0.26	-0.6
1,399,599	+		MMJJ_RS07645	0.26	-0.2
1,399,600	-		MMJJ_RS07645	0.26	+0.5
1,399,600	-		MMJJ_RS07645	0.26	-0.7
1,399,600	-		MMJJ_RS07645	0.26	-0.4
1,399,601	+		MMJJ_RS07645	0.27	-0.5
1,399,608	-		MMJJ_RS07645	0.30	+0.3
1,399,609	+		MMJJ_RS07645	0.30	-0.4
1,399,633	+		MMJJ_RS07645	0.40	+1.2
1,399,690	+		MMJJ_RS07645	0.63	-1.2
1,399,690	+		MMJJ_RS07645	0.63	+0.4
1,399,725	+		MMJJ_RS07645	0.77	-0.5
1,399,778	-				-3.2
1,399,809	-				-1.3
1,399,821	-				+0.5
1,399,909	+				-0.5
1,399,918	-				+0.5
1,399,918	-				-0.4
1,399,919	+				+1.1
1,399,929	-				+0.6
1,399,953	-				-1.3
1,399,953	-				-0.8
1,399,953	-				-2.1
1,399,953	-				-2.0
1,399,953	-				-0.6
1,399,953	-				-1.5
1,399,953	-				-0.9
1,399,954	+				-0.3
1,399,954	+				-1.5
1,399,954	+				+0.6
1,399,955	-				-1.2
1,399,955	-				-0.3
1,399,956	+				-1.0
1,399,958	-				-1.1
1,399,958	-				-0.6
1,399,958	-				-1.1
1,399,959	+				-1.4
1,399,959	+				-0.8
1,399,959	+				-2.6
1,399,960	-				-1.8
1,399,960	-				-2.0
1,399,960	-				-1.2
1,399,960	-				-1.2
1,399,960	-				-0.9
1,399,960	-				-1.2
1,399,960	-				-1.6
1,399,961	+				-0.9
1,399,961	+				-1.3
1,399,962	-				-1.1
1,399,962	-				-0.0
1,399,962	-				-1.6
1,399,962	-				-1.3
1,399,963	+				-2.2
1,399,963	+				-2.1
1,399,963	+				-0.3
1,399,965	-				-0.2
1,399,965	-				-0.7
1,399,965	-				-1.8
1,399,965	-				-2.3
1,399,965	-				-1.3
1,399,965	-				-0.6
1,399,966	+				-1.3
1,399,966	+				-1.7
1,399,969	-				-2.7
1,399,969	-				-1.3
1,399,969	-				-2.1
1,399,970	+				-1.8
1,399,970	+				-1.6
1,399,970	+				-1.2
1,399,970	+				-1.1
1,399,973	-				-1.4
1,399,973	-				-0.3
1,399,973	-				-1.4
1,399,974	+				-1.1
1,399,974	+				-1.0
1,399,974	+				-2.3
1,399,974	+				-0.6
1,399,974	+				-1.5
1,399,974	+				-1.8
1,399,984	+				-1.5
1,400,018	-				-2.3
1,400,021	-				-2.0
1,400,022	+				-2.2
1,400,022	+				-2.9
1,400,032	-				-2.0
1,400,032	-				-2.3
1,400,033	+				-2.2
1,400,080	-				-2.0
1,400,081	+				-1.1
1,400,081	+				-0.6
1,400,094	+				-1.4
1,400,136	-		MMJJ_RS07650	0.13	-1.1
1,400,136	-		MMJJ_RS07650	0.13	-2.1
1,400,137	+		MMJJ_RS07650	0.14	-1.9
1,400,137	+		MMJJ_RS07650	0.14	-0.5
1,400,137	+		MMJJ_RS07650	0.14	-2.7
1,400,170	-		MMJJ_RS07650	0.18	-2.7
1,400,170	-		MMJJ_RS07650	0.18	-1.9
1,400,170	-		MMJJ_RS07650	0.18	-1.7
1,400,171	+		MMJJ_RS07650	0.18	-1.6
1,400,210	-		MMJJ_RS07650	0.22	+0.0
1,400,230	-		MMJJ_RS07650	0.25	-1.6
1,400,279	-		MMJJ_RS07650	0.31	-1.1
1,400,288	-		MMJJ_RS07650	0.32	-2.0
1,400,288	-		MMJJ_RS07650	0.32	-2.6
1,400,288	-		MMJJ_RS07650	0.32	-2.7
1,400,289	+		MMJJ_RS07650	0.32	-1.5
1,400,299	-		MMJJ_RS07650	0.33	-1.6