Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS07635

Experiment: formate N-free with 10mM Ammonium chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	formate N-free with 10mM Ammonium chloride
1,396,030	-		MMJJ_RS07630	0.45	+0.2
1,396,034	-		MMJJ_RS07630	0.45	+1.0
1,396,064	+		MMJJ_RS07630	0.47	+0.0
1,396,076	-		MMJJ_RS07630	0.48	+0.4
1,396,092	-		MMJJ_RS07630	0.49	-1.1
1,396,120	-		MMJJ_RS07630	0.51	-0.1
1,396,153	+		MMJJ_RS07630	0.54	-2.5
1,396,157	+		MMJJ_RS07630	0.54	-0.1
1,396,194	+		MMJJ_RS07630	0.57	+0.9
1,396,197	-		MMJJ_RS07630	0.57	+0.0
1,396,197	-		MMJJ_RS07630	0.57	-0.8
1,396,198	+		MMJJ_RS07630	0.57	-1.1
1,396,198	+		MMJJ_RS07630	0.57	-1.1
1,396,219	-		MMJJ_RS07630	0.58	-1.3
1,396,219	-		MMJJ_RS07630	0.58	-0.0
1,396,219	-		MMJJ_RS07630	0.58	+0.6
1,396,219	-		MMJJ_RS07630	0.58	-1.8
1,396,219	-		MMJJ_RS07630	0.58	-0.2
1,396,220	+		MMJJ_RS07630	0.58	+0.0
1,396,220	+		MMJJ_RS07630	0.58	-1.0
1,396,220	+		MMJJ_RS07630	0.58	-0.8
1,396,251	-		MMJJ_RS07630	0.61	-0.5
1,396,252	+		MMJJ_RS07630	0.61	-0.6
1,396,255	-		MMJJ_RS07630	0.61	-0.8
1,396,255	-		MMJJ_RS07630	0.61	+0.0
1,396,256	+		MMJJ_RS07630	0.61	+2.0
1,396,256	+		MMJJ_RS07630	0.61	+0.4
1,396,259	-		MMJJ_RS07630	0.61	+0.1
1,396,259	-		MMJJ_RS07630	0.61	+1.0
1,396,281	+		MMJJ_RS07630	0.63	-0.2
1,396,281	+		MMJJ_RS07630	0.63	+0.2
1,396,281	+		MMJJ_RS07630	0.63	-0.1
1,396,284	-		MMJJ_RS07630	0.63	-0.2
1,396,284	-		MMJJ_RS07630	0.63	-0.6
1,396,285	+		MMJJ_RS07630	0.63	-0.7
1,396,285	+		MMJJ_RS07630	0.63	-1.7
1,396,285	+		MMJJ_RS07630	0.63	-0.3
1,396,285	+		MMJJ_RS07630	0.63	-1.4
1,396,336	+		MMJJ_RS07630	0.67	+0.3
1,396,353	-		MMJJ_RS07630	0.68	+0.2
1,396,396	-		MMJJ_RS07630	0.71	+0.4
1,396,399	-		MMJJ_RS07630	0.71	+0.4
1,396,399	-		MMJJ_RS07630	0.71	-2.4
1,396,399	-		MMJJ_RS07630	0.71	+0.3
1,396,399	-		MMJJ_RS07630	0.71	-0.8
1,396,400	+		MMJJ_RS07630	0.71	+0.4
1,396,403	-				-1.0
1,396,403	-		MMJJ_RS07630	0.71	+0.7
1,396,403	-		MMJJ_RS07630	0.71	-0.5
1,396,404	+		MMJJ_RS07630	0.72	+0.8
1,396,446	-		MMJJ_RS07630	0.75	-0.8
1,396,447	+		MMJJ_RS07630	0.75	+0.3
1,396,598	+		MMJJ_RS07630	0.85	+0.1
1,396,638	-		MMJJ_RS07630	0.88	-0.1
1,396,776	-				-0.8
1,396,776	-				+0.3
1,396,825	+				+1.4
1,396,825	+				+0.3
1,396,829	+				-1.8
1,396,831	-				-0.8
1,396,857	+				+0.1
1,396,862	-				+0.0
1,396,863	+				-0.1
1,396,864	-				-2.3
1,396,864	-				+0.5
1,396,865	+				+0.7
1,396,865	+				+0.8
1,396,866	-				+0.9
1,396,866	-				-1.9
1,396,867	+				+0.4
1,396,867	+				+0.7
1,396,867	+				+0.5
1,396,875	-				+0.0
1,396,886	-				-0.5
1,396,886	-				+0.1
1,396,886	-				-0.7
1,396,887	+				+0.2
1,396,889	-				+0.6
1,396,889	-				+0.0
1,396,890	+				-0.3
1,396,891	-				+0.4
1,396,892	+				-0.3
1,396,892	+				+0.6
1,396,913	-				+0.3
1,396,913	-				+0.7
1,396,918	-				+0.9
1,396,918	-				-0.2
1,396,918	-				-0.2
1,396,918	-				+0.4
1,396,919	+				+0.4
1,396,919	+				+2.6
1,396,919	+				+0.3
1,396,930	+				+1.1
1,396,930	+				-0.5
1,396,930	+				+0.7
1,396,930	+				+0.5
1,396,930	+				+0.2
1,396,930	+				-0.5
1,396,933	-				+1.6
1,396,933	-				+0.9
1,396,934	+				-0.0
1,396,987	-				-0.6
1,396,991	+				+0.4
1,396,996	+				+0.1
1,396,996	+				-1.7
1,396,996	+				-0.7
1,397,032	-				-1.7
1,397,035	-				-3.2
1,397,035	-				-1.9
1,397,054	-				-0.8
1,397,054	-				-1.6
1,397,055	+		MMJJ_RS07635	0.10	-1.6
1,397,055	+		MMJJ_RS07635	0.10	-2.9
1,397,055	+		MMJJ_RS07635	0.10	-2.4
1,397,056	-		MMJJ_RS07635	0.10	-2.8
1,397,056	-		MMJJ_RS07635	0.10	-1.5
1,397,057	+		MMJJ_RS07635	0.11	-2.0
1,397,057	+		MMJJ_RS07635	0.11	-0.6
1,397,059	-		MMJJ_RS07635	0.11	-1.2
1,397,060	+		MMJJ_RS07635	0.11	-0.6
1,397,075	-		MMJJ_RS07635	0.16	-2.0
1,397,088	+		MMJJ_RS07635	0.19	-2.0
1,397,091	+		MMJJ_RS07635	0.20	-2.2
1,397,094	-		MMJJ_RS07635	0.21	-1.3
1,397,094	-		MMJJ_RS07635	0.21	-1.8
1,397,094	-		MMJJ_RS07635	0.21	-0.7
1,397,095	+		MMJJ_RS07635	0.21	-2.4
1,397,103	+		MMJJ_RS07635	0.23	-1.9
1,397,103	+		MMJJ_RS07635	0.23	-1.6
1,397,103	+		MMJJ_RS07635	0.23	-2.0
1,397,160	+		MMJJ_RS07635	0.39	-2.3
1,397,164	-		MMJJ_RS07635	0.40	-2.0
1,397,174	-		MMJJ_RS07635	0.43	-2.4
1,397,206	-		MMJJ_RS07635	0.52	-1.4
1,397,211	+		MMJJ_RS07635	0.53	-1.2
1,397,216	-		MMJJ_RS07635	0.55	-1.3
1,397,229	-		MMJJ_RS07635	0.58	-0.8
1,397,235	+		MMJJ_RS07635	0.60	+1.0
1,397,292	+		MMJJ_RS07635	0.76	-1.3
1,397,317	-		MMJJ_RS07635	0.83	-2.3
1,397,318	+		MMJJ_RS07635	0.83	-3.2
1,397,342	+		MMJJ_RS07635	0.90	-0.9
1,397,383	-				-1.9
1,397,450	+				-3.6
1,397,473	-				-1.8
1,397,474	+				-4.5
1,397,474	+				-0.6
1,397,582	+				-2.3
1,397,618	-		MMJJ_RS07640	0.11	-0.8
1,397,618	-		MMJJ_RS07640	0.11	-1.4
1,397,619	+		MMJJ_RS07640	0.11	-2.6
1,397,622	-		MMJJ_RS07640	0.11	-1.6
1,397,622	-		MMJJ_RS07640	0.11	-2.6
1,397,622	-		MMJJ_RS07640	0.11	-2.1
1,397,623	+		MMJJ_RS07640	0.11	-2.2
1,397,623	+		MMJJ_RS07640	0.11	-0.6
1,397,624	-		MMJJ_RS07640	0.11	-1.1
1,397,652	+		MMJJ_RS07640	0.13	-1.4
1,397,669	-		MMJJ_RS07640	0.14	-2.2
1,397,696	+		MMJJ_RS07640	0.15	-2.3
1,397,709	+		MMJJ_RS07640	0.16	-3.0
1,397,709	+		MMJJ_RS07640	0.16	-2.0
1,397,796	-		MMJJ_RS07640	0.20	-1.3
1,397,837	-		MMJJ_RS07640	0.22	-3.1
1,397,837	-		MMJJ_RS07640	0.22	-1.7
1,397,838	+		MMJJ_RS07640	0.23	-1.7
1,397,838	+		MMJJ_RS07640	0.23	-2.3
1,397,846	+		MMJJ_RS07640	0.23	-2.8
1,397,869	-		MMJJ_RS07640	0.24	-1.4
1,397,870	+		MMJJ_RS07640	0.24	-1.8
1,397,900	-		MMJJ_RS07640	0.26	-2.0
1,397,908	-		MMJJ_RS07640	0.26	-3.0
1,397,909	+		MMJJ_RS07640	0.26	-1.9
1,397,927	-		MMJJ_RS07640	0.27	-1.8
1,397,927	-		MMJJ_RS07640	0.27	-1.8
1,397,928	+		MMJJ_RS07640	0.27	-0.7
1,397,929	-		MMJJ_RS07640	0.27	-2.0
1,397,929	-		MMJJ_RS07640	0.27	-2.9
1,397,972	+		MMJJ_RS07640	0.29	-3.3
1,397,975	-		MMJJ_RS07640	0.30	-2.7
1,397,975	-		MMJJ_RS07640	0.30	-1.6
1,397,975	-		MMJJ_RS07640	0.30	-2.0
1,397,975	-		MMJJ_RS07640	0.30	-2.9
1,397,976	+		MMJJ_RS07640	0.30	-2.2
1,397,976	+		MMJJ_RS07640	0.30	-1.6
1,397,976	+		MMJJ_RS07640	0.30	-2.5
1,397,977	-		MMJJ_RS07640	0.30	-2.5
1,397,977	-				-0.6
1,397,978	+		MMJJ_RS07640	0.30	-0.4
1,397,978	+		MMJJ_RS07640	0.30	-2.0
1,398,007	-		MMJJ_RS07640	0.31	-3.8
1,398,008	+		MMJJ_RS07640	0.31	-2.7
1,398,008	+		MMJJ_RS07640	0.31	-1.6
1,398,008	+		MMJJ_RS07640	0.31	-3.9
1,398,037	-		MMJJ_RS07640	0.33	-1.4
1,398,054	+		MMJJ_RS07640	0.34	-2.3
1,398,090	+		MMJJ_RS07640	0.36	-2.0
1,398,122	-		MMJJ_RS07640	0.37	-4.0
1,398,123	+		MMJJ_RS07640	0.37	-2.1
1,398,126	+		MMJJ_RS07640	0.38	-1.3
1,398,210	-		MMJJ_RS07640	0.42	-1.6
1,398,232	-		MMJJ_RS07640	0.43	-1.9
1,398,233	+		MMJJ_RS07640	0.43	-1.6
1,398,255	-		MMJJ_RS07640	0.44	-1.3
1,398,266	+		MMJJ_RS07640	0.45	-2.5
1,398,266	+		MMJJ_RS07640	0.45	-2.0
1,398,267	-		MMJJ_RS07640	0.45	-0.5
1,398,267	-		MMJJ_RS07640	0.45	-6.0
1,398,289	-		MMJJ_RS07640	0.46	-2.8
1,398,290	+		MMJJ_RS07640	0.46	-1.8
1,398,304	-		MMJJ_RS07640	0.47	-2.0
1,398,348	+		MMJJ_RS07640	0.49	-2.7
1,398,364	-		MMJJ_RS07640	0.50	-2.5