Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3074

Experiment: casaminos (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos (C)
3,213,622	+		Ga0059261_3072	0.38	-0.4
3,213,622	+		Ga0059261_3072	0.38	-0.0
3,213,622	+		Ga0059261_3072	0.38	+0.4
3,213,622	+		Ga0059261_3072	0.38	-0.7
3,213,622	+		Ga0059261_3072	0.38	+0.8
3,213,623	-		Ga0059261_3072	0.38	-0.6
3,213,623	-		Ga0059261_3072	0.38	-0.4
3,213,623	-		Ga0059261_3072	0.38	-0.1
3,213,623	-		Ga0059261_3072	0.38	-2.0
3,213,637	+		Ga0059261_3072	0.39	+0.2
3,213,637	+		Ga0059261_3072	0.39	-1.7
3,213,637	+		Ga0059261_3072	0.39	-1.0
3,213,637	+		Ga0059261_3072	0.39	+0.2
3,213,638	-		Ga0059261_3072	0.39	+0.9
3,213,638	-		Ga0059261_3072	0.39	-0.7
3,213,782	+		Ga0059261_3072	0.54	+0.4
3,213,782	+		Ga0059261_3072	0.54	+0.5
3,213,783	-		Ga0059261_3072	0.54	+0.2
3,213,939	-		Ga0059261_3072	0.69	+0.0
3,213,960	+		Ga0059261_3072	0.71	+0.5
3,213,960	+		Ga0059261_3072	0.71	-0.3
3,213,960	+		Ga0059261_3072	0.71	-0.6
3,213,961	-		Ga0059261_3072	0.71	+0.9
3,213,961	-		Ga0059261_3072	0.71	+0.1
3,213,961	-		Ga0059261_3072	0.71	-0.3
3,214,002	+		Ga0059261_3072	0.76	+0.6
3,214,003	-				+1.0
3,214,017	+		Ga0059261_3072	0.77	+0.0
3,214,018	-		Ga0059261_3072	0.77	-0.8
3,214,018	-		Ga0059261_3072	0.77	-0.0
3,214,192	+				-1.4
3,214,192	+				+1.0
3,214,192	+				+0.6
3,214,193	-				-0.1
3,214,193	-				+0.1
3,214,193	-				+3.6
3,214,193	-				+0.6
3,214,193	-				+0.3
3,214,193	-				+0.3
3,214,193	-				-0.5
3,214,261	+				+1.4
3,214,261	+				+0.4
3,214,261	+				+0.5
3,214,262	-				-0.1
3,214,262	-				+0.4
3,214,262	-				-0.2
3,214,262	-				+0.4
3,214,285	+		Ga0059261_3073	0.11	-0.5
3,214,285	+		Ga0059261_3073	0.11	-1.2
3,214,285	+		Ga0059261_3073	0.11	-0.2
3,214,285	+		Ga0059261_3073	0.11	-0.3
3,214,285	+		Ga0059261_3073	0.11	-0.5
3,214,285	+		Ga0059261_3073	0.11	-0.7
3,214,286	-		Ga0059261_3073	0.12	-0.3
3,214,286	-				+2.2
3,214,286	-		Ga0059261_3073	0.12	-0.2
3,214,286	-		Ga0059261_3073	0.12	+0.2
3,214,838	+				-0.1
3,214,838	+				+0.6
3,214,838	+				+0.0
3,214,838	+				-0.2
3,214,838	+				+0.3
3,214,838	+				+0.7
3,214,838	+				+1.0
3,214,838	+				-0.1
3,214,839	-				+0.4
3,214,839	-				+0.3
3,214,839	-				+0.0
3,214,839	-				+0.8
3,214,839	-				-1.7
3,214,839	-				-0.9
3,214,839	-				-0.7
3,214,839	-				-0.6
3,214,865	-				+0.1
3,214,928	+				-0.8
3,214,928	+				-0.2
3,214,928	+				+0.6
3,214,928	+				-1.0
3,214,928	+				+0.2
3,214,928	+				+0.0
3,214,929	-				+1.2
3,214,929	-				+0.3
3,215,188	+		Ga0059261_3075	0.14	+0.7
3,215,189	-		Ga0059261_3075	0.14	-0.5
3,215,200	+		Ga0059261_3075	0.14	-1.2
3,215,201	-		Ga0059261_3075	0.15	+0.2
3,215,372	+		Ga0059261_3075	0.22	-2.6
3,215,372	+		Ga0059261_3075	0.22	-0.2
3,215,404	+		Ga0059261_3075	0.23	-0.4
3,215,404	+		Ga0059261_3075	0.23	-0.2
3,215,404	+		Ga0059261_3075	0.23	+0.6
3,215,404	+		Ga0059261_3075	0.23	+0.7
3,215,404	+		Ga0059261_3075	0.23	+0.4
3,215,405	-		Ga0059261_3075	0.23	-0.6
3,215,405	-		Ga0059261_3075	0.23	+0.5
3,215,405	-		Ga0059261_3075	0.23	+0.3
3,215,405	-		Ga0059261_3075	0.23	-0.1
3,215,405	-		Ga0059261_3075	0.23	-1.2
3,215,405	-		Ga0059261_3075	0.23	+0.1
3,215,405	-		Ga0059261_3075	0.23	-1.0
3,215,405	-		Ga0059261_3075	0.23	-1.0
3,215,464	+		Ga0059261_3075	0.25	+0.2
3,215,464	+		Ga0059261_3075	0.25	-0.2
3,215,464	+		Ga0059261_3075	0.25	-0.0
3,215,464	+		Ga0059261_3075	0.25	+0.3
3,215,464	+		Ga0059261_3075	0.25	+0.6
3,215,464	+		Ga0059261_3075	0.25	+0.0
3,215,464	+		Ga0059261_3075	0.25	+0.0
3,215,464	+		Ga0059261_3075	0.25	-0.6
3,215,464	+		Ga0059261_3075	0.25	-0.2
3,215,465	-		Ga0059261_3075	0.25	-0.3
3,215,465	-		Ga0059261_3075	0.25	-0.0
3,215,465	-		Ga0059261_3075	0.25	+0.4
3,215,538	+		Ga0059261_3075	0.28	-0.9
3,215,538	+		Ga0059261_3075	0.28	-0.3
3,215,538	+		Ga0059261_3075	0.28	+0.1
3,215,538	+		Ga0059261_3075	0.28	-0.9
3,215,538	+		Ga0059261_3075	0.28	-0.5
3,215,539	-		Ga0059261_3075	0.28	+0.5
3,215,565	+		Ga0059261_3075	0.29	-0.2
3,215,565	+		Ga0059261_3075	0.29	+0.7
3,215,565	+		Ga0059261_3075	0.29	-0.1
3,215,565	+		Ga0059261_3075	0.29	-0.0
3,215,566	-		Ga0059261_3075	0.29	-0.0
3,215,737	+		Ga0059261_3075	0.36	+0.2
3,215,737	+		Ga0059261_3075	0.36	+0.5
3,215,737	+		Ga0059261_3075	0.36	+0.2
3,215,737	+		Ga0059261_3075	0.36	-0.3
3,215,737	+				+0.0
3,215,737	+		Ga0059261_3075	0.36	-0.1
3,215,737	+		Ga0059261_3075	0.36	+0.0
3,215,737	+		Ga0059261_3075	0.36	-0.6
3,215,737	+		Ga0059261_3075	0.36	+0.7
3,215,737	+		Ga0059261_3075	0.36	-0.2
3,215,737	+		Ga0059261_3075	0.36	+0.9
3,215,737	+		Ga0059261_3075	0.36	+0.8
3,215,738	-		Ga0059261_3075	0.36	-0.2
3,215,738	-		Ga0059261_3075	0.36	+0.7
3,215,738	-		Ga0059261_3075	0.36	+0.0
3,215,738	-		Ga0059261_3075	0.36	+0.4
3,215,738	-		Ga0059261_3075	0.36	-0.4
3,215,738	-		Ga0059261_3075	0.36	+0.1
3,215,738	-		Ga0059261_3075	0.36	-0.1
3,215,738	-		Ga0059261_3075	0.36	-0.2
3,215,824	+		Ga0059261_3075	0.40	+0.0
3,215,824	+		Ga0059261_3075	0.40	+0.2
3,215,824	+		Ga0059261_3075	0.40	-0.1
3,215,824	+		Ga0059261_3075	0.40	+0.8
3,215,824	+		Ga0059261_3075	0.40	-0.6
3,215,824	+		Ga0059261_3075	0.40	+0.4
3,215,825	-		Ga0059261_3075	0.40	-0.6
3,215,825	-		Ga0059261_3075	0.40	+0.2
3,215,825	-		Ga0059261_3075	0.40	+0.0
3,215,825	-		Ga0059261_3075	0.40	+0.2
3,215,825	-		Ga0059261_3075	0.40	-0.4