Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2614

Experiment: casaminos (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos (C)
2,701,254	+				+0.5
2,701,254	+				+0.9
2,701,254	+				+0.4
2,701,254	+				-0.3
2,701,254	+				+0.6
2,701,254	+				+0.3
2,701,254	+				-0.1
2,701,254	+				+0.5
2,701,254	+				+0.5
2,701,254	+				+0.4
2,701,254	+				+0.5
2,701,254	+				+0.3
2,701,254	+				+0.2
2,701,254	+				+0.8
2,701,254	+				-0.3
2,701,254	+				-0.2
2,701,254	+				-0.0
2,701,254	+				-0.1
2,701,254	+				-0.5
2,701,255	-				+0.4
2,701,255	-				+0.5
2,701,255	-				-0.4
2,701,255	-				-0.2
2,701,255	-				+1.0
2,701,255	-				+0.4
2,701,255	-				+0.1
2,701,255	-				-0.3
2,701,255	-				+0.2
2,701,255	-				-1.1
2,701,255	-				+0.1
2,701,255	-				+0.4
2,701,255	-				-0.5
2,701,255	-				+0.7
2,701,255	-				-0.1
2,701,255	-				+0.7
2,701,255	-				+0.1
2,701,255	-				-0.1
2,701,256	+				-0.2
2,701,256	+				+1.0
2,701,256	+				-0.2
2,701,257	-				+2.5
2,701,257	-				-0.1
2,701,257	-				+0.2
2,701,285	-				+0.0
2,701,285	-				-0.1
2,701,285	-				-0.2
2,701,287	+				+0.4
2,701,287	+				-0.7
2,701,287	+				-0.8
2,701,287	+				-0.1
2,701,287	+				+0.5
2,701,287	+				-0.0
2,701,288	-				+0.0
2,701,319	+				-0.5
2,701,320	-				-0.0
2,701,320	-				-0.2
2,701,382	+				+0.3
2,701,382	+				-0.3
2,701,382	+				+0.1
2,701,394	+		Ga0059261_2613	0.12	-0.9
2,701,394	+		Ga0059261_2613	0.12	-0.2
2,701,394	+		Ga0059261_2613	0.12	+0.1
2,701,394	+		Ga0059261_2613	0.12	-0.1
2,701,394	+		Ga0059261_2613	0.12	+0.4
2,701,395	-		Ga0059261_2613	0.12	-0.2
2,701,395	-		Ga0059261_2613	0.12	-0.1
2,701,395	-		Ga0059261_2613	0.12	-0.2
2,701,395	-		Ga0059261_2613	0.12	-0.1
2,701,709	+		Ga0059261_2613	0.53	+0.4
2,701,709	+		Ga0059261_2613	0.53	+0.7
2,701,709	+		Ga0059261_2613	0.53	-0.1
2,701,709	+		Ga0059261_2613	0.53	-0.8
2,701,710	-		Ga0059261_2613	0.53	-0.1
2,701,710	-		Ga0059261_2613	0.53	+0.0
2,701,710	-		Ga0059261_2613	0.53	+0.3
2,701,710	-		Ga0059261_2613	0.53	+0.2
2,701,710	-		Ga0059261_2613	0.53	-0.6
2,701,710	-		Ga0059261_2613	0.53	+0.5
2,702,060	+				+0.2
2,702,061	-				+1.1
2,702,131	+				-0.1
2,702,132	-				-0.4
2,702,323	+		Ga0059261_2614	0.12	+0.2
2,702,323	+		Ga0059261_2614	0.12	+0.0
2,702,323	+		Ga0059261_2614	0.12	-0.0
2,702,324	-		Ga0059261_2614	0.12	+0.0
2,702,344	+		Ga0059261_2614	0.14	+0.2
2,702,344	+		Ga0059261_2614	0.14	-0.4
2,702,344	+		Ga0059261_2614	0.14	+0.5
2,702,344	+		Ga0059261_2614	0.14	-0.0
2,702,345	-				+1.8
2,702,345	-		Ga0059261_2614	0.14	+1.0
2,702,386	+		Ga0059261_2614	0.17	+0.1
2,702,387	-		Ga0059261_2614	0.17	-0.4
2,702,428	+		Ga0059261_2614	0.21	-0.5
2,702,428	+		Ga0059261_2614	0.21	+0.2
2,702,428	+		Ga0059261_2614	0.21	-0.1
2,702,428	+		Ga0059261_2614	0.21	-0.5
2,702,429	-		Ga0059261_2614	0.21	+0.3
2,702,429	-		Ga0059261_2614	0.21	-0.0
2,702,429	-				+0.2
2,702,452	+		Ga0059261_2614	0.22	-0.1
2,702,453	-		Ga0059261_2614	0.22	-0.8
2,702,453	-		Ga0059261_2614	0.22	+0.9
2,702,518	+		Ga0059261_2614	0.28	-0.1
2,702,519	-		Ga0059261_2614	0.28	-0.6
2,702,519	-		Ga0059261_2614	0.28	-0.0
2,702,519	-		Ga0059261_2614	0.28	-0.3
2,702,793	+		Ga0059261_2614	0.49	+0.1
2,702,793	+		Ga0059261_2614	0.49	+0.4
2,702,793	+		Ga0059261_2614	0.49	+0.2
2,702,905	+		Ga0059261_2614	0.58	+1.0
2,702,905	+		Ga0059261_2614	0.58	-0.5
2,702,905	+		Ga0059261_2614	0.58	+0.2
2,702,905	+		Ga0059261_2614	0.58	+0.3
2,702,905	+		Ga0059261_2614	0.58	+0.8
2,702,905	+		Ga0059261_2614	0.58	-0.3
2,702,905	+		Ga0059261_2614	0.58	+0.2
2,702,905	+		Ga0059261_2614	0.58	+0.8
2,702,905	+		Ga0059261_2614	0.58	+0.4
2,702,906	-		Ga0059261_2614	0.58	-0.1
2,702,906	-		Ga0059261_2614	0.58	-0.3
2,702,906	-		Ga0059261_2614	0.58	+0.6
2,702,906	-		Ga0059261_2614	0.58	+0.3
2,702,906	-		Ga0059261_2614	0.58	-0.4
2,702,906	-		Ga0059261_2614	0.58	+0.9
2,702,906	-		Ga0059261_2614	0.58	+1.8
2,702,906	-		Ga0059261_2614	0.58	+0.8
2,702,906	-		Ga0059261_2614	0.58	+0.2
2,702,906	-		Ga0059261_2614	0.58	-0.2
2,702,906	-		Ga0059261_2614	0.58	+0.5
2,702,906	-		Ga0059261_2614	0.58	-0.6
2,702,906	-		Ga0059261_2614	0.58	-0.0
2,702,906	-		Ga0059261_2614	0.58	-0.2
2,702,906	-		Ga0059261_2614	0.58	-0.4
2,702,906	-		Ga0059261_2614	0.58	+0.1
2,702,906	-		Ga0059261_2614	0.58	+0.1
2,702,907	+		Ga0059261_2614	0.58	+0.0
2,702,926	+		Ga0059261_2614	0.60	-0.5
2,702,926	+		Ga0059261_2614	0.60	-0.2
2,702,926	+		Ga0059261_2614	0.60	+0.6
2,702,926	+		Ga0059261_2614	0.60	+0.5
2,702,926	+		Ga0059261_2614	0.60	+0.2
2,702,926	+		Ga0059261_2614	0.60	+0.1
2,702,926	+		Ga0059261_2614	0.60	+0.3
2,702,927	-		Ga0059261_2614	0.60	+0.3
2,702,927	-				+0.2
2,702,927	-		Ga0059261_2614	0.60	+0.2
2,702,927	-		Ga0059261_2614	0.60	+0.4
2,702,927	-		Ga0059261_2614	0.60	+0.8
2,702,927	-		Ga0059261_2614	0.60	-0.0
2,702,927	-		Ga0059261_2614	0.60	-0.3
2,702,927	-		Ga0059261_2614	0.60	+0.4
2,702,927	-		Ga0059261_2614	0.60	-0.6
2,702,927	-		Ga0059261_2614	0.60	+0.1
2,702,927	-		Ga0059261_2614	0.60	+0.4
2,702,927	-		Ga0059261_2614	0.60	-0.4
2,702,927	-		Ga0059261_2614	0.60	-0.2
2,702,927	-		Ga0059261_2614	0.60	-0.3
2,702,938	+		Ga0059261_2614	0.61	-0.1
2,702,938	+		Ga0059261_2614	0.61	+0.0
2,702,938	+		Ga0059261_2614	0.61	-0.1
2,702,938	+		Ga0059261_2614	0.61	+0.3
2,702,938	+				+2.1
2,702,938	+		Ga0059261_2614	0.61	+0.0
2,702,938	+		Ga0059261_2614	0.61	+0.2
2,702,939	-		Ga0059261_2614	0.61	+0.3
2,702,939	-		Ga0059261_2614	0.61	+0.2
2,702,939	-		Ga0059261_2614	0.61	+0.1
2,702,981	+		Ga0059261_2614	0.64	+0.2
2,702,984	-		Ga0059261_2614	0.64	-0.8
2,702,984	-		Ga0059261_2614	0.64	+0.3
2,702,984	-		Ga0059261_2614	0.64	+0.2
2,702,984	-		Ga0059261_2614	0.64	-0.1
2,702,984	-		Ga0059261_2614	0.64	-0.6
2,702,984	-		Ga0059261_2614	0.64	+1.0
2,702,984	-		Ga0059261_2614	0.64	+0.4
2,703,196	+				+0.4
2,703,196	+		Ga0059261_2614	0.81	+0.5
2,703,196	+		Ga0059261_2614	0.81	+0.3
2,703,196	+				-0.2
2,703,196	+		Ga0059261_2614	0.81	-0.6
2,703,196	+		Ga0059261_2614	0.81	+1.5
2,703,196	+		Ga0059261_2614	0.81	+0.1
2,703,197	-		Ga0059261_2614	0.81	+0.5
2,703,197	-		Ga0059261_2614	0.81	+0.1
2,703,197	-		Ga0059261_2614	0.81	-0.3
2,703,328	+				-0.1
2,703,328	+				+1.0
2,703,328	+				+1.0
2,703,328	+				-0.1
2,703,329	-				+0.1
2,703,330	+				+0.5
2,703,330	+				-0.2
2,703,330	+				-0.2
2,703,330	+				-1.9
2,703,330	+				-0.5
2,703,330	+				+0.9
2,703,330	+				+0.5
2,703,330	+				+0.4
2,703,330	+				-0.1
2,703,330	+				-0.0
2,703,330	+				+0.0
2,703,330	+				-0.2
2,703,331	-				-0.2
2,703,331	-				-0.2
2,703,331	-				-0.1
2,703,331	-				+0.5
2,703,331	-				+2.8
2,703,331	-				+0.0
2,703,343	+				+0.2
2,703,343	+				-0.1
2,703,343	+				-1.4
2,703,344	-				-0.2
2,703,344	-				+0.9
2,703,344	-				-0.8
2,703,520	+				-0.1
2,703,521	-				+1.0
2,703,521	-				+0.1
2,703,521	-				-0.2
2,703,523	+				+1.4
2,703,523	+				-0.3
2,703,523	+				-0.4
2,703,523	+				+0.8
2,703,523	+				+0.4
2,703,524	-				-0.2
2,703,524	-				+0.8
2,703,524	-				-1.1
2,703,524	-				+0.2
2,703,526	+				-0.6
2,703,526	+				+0.2
2,703,526	+				+0.8
2,703,526	+				+0.8
2,703,527	-				-0.1
2,703,527	-				+0.4
2,703,607	+		Ga0059261_2615	0.17	+0.0
2,703,607	+		Ga0059261_2615	0.17	+0.6
2,703,607	+		Ga0059261_2615	0.17	-0.5
2,703,608	-		Ga0059261_2615	0.17	-0.5
2,703,608	-		Ga0059261_2615	0.17	-0.4
2,703,608	-		Ga0059261_2615	0.17	+1.9
2,703,628	+		Ga0059261_2615	0.19	+1.8
2,703,629	-		Ga0059261_2615	0.19	-0.3
2,703,644	+		Ga0059261_2615	0.20	+0.0
2,703,644	+		Ga0059261_2615	0.20	-0.8
2,703,645	-		Ga0059261_2615	0.20	+0.7
2,703,645	-		Ga0059261_2615	0.20	-0.1
2,703,771	+		Ga0059261_2615	0.31	-0.2
2,703,772	-		Ga0059261_2615	0.31	+0.1
2,703,772	-		Ga0059261_2615	0.31	-0.2
2,703,818	+		Ga0059261_2615	0.35	+0.2
2,703,818	+		Ga0059261_2615	0.35	+0.5
2,703,818	+		Ga0059261_2615	0.35	+0.1
2,703,819	-		Ga0059261_2615	0.35	-0.3
2,703,995	+		Ga0059261_2615	0.51	-0.1
2,703,995	+		Ga0059261_2615	0.51	-0.3
2,703,996	-		Ga0059261_2615	0.51	-0.3
2,704,424	+		Ga0059261_2615	0.88	-0.2
2,704,424	+		Ga0059261_2615	0.88	+0.2
2,704,424	+		Ga0059261_2615	0.88	-0.6
2,704,424	+		Ga0059261_2615	0.88	-0.9
2,704,424	+		Ga0059261_2615	0.88	+0.6
2,704,424	+		Ga0059261_2615	0.88	-0.1
2,704,424	+		Ga0059261_2615	0.88	-0.1
2,704,424	+		Ga0059261_2615	0.88	+0.4
2,704,424	+		Ga0059261_2615	0.88	+0.6
2,704,424	+		Ga0059261_2615	0.88	-0.4
2,704,424	+		Ga0059261_2615	0.88	-1.7
2,704,424	+		Ga0059261_2615	0.88	+0.3
2,704,424	+		Ga0059261_2615	0.88	+0.3
2,704,425	-		Ga0059261_2615	0.88	+0.6
2,704,425	-		Ga0059261_2615	0.88	-0.3
2,704,425	-		Ga0059261_2615	0.88	+0.2
2,704,425	-		Ga0059261_2615	0.88	+0.2
2,704,425	-		Ga0059261_2615	0.88	+0.0
2,704,425	-		Ga0059261_2615	0.88	-0.2
2,704,425	-		Ga0059261_2615	0.88	-1.1
2,704,425	-		Ga0059261_2615	0.88	+0.1
2,704,425	-		Ga0059261_2615	0.88	-0.2
2,704,425	-		Ga0059261_2615	0.88	-0.1
2,704,425	-		Ga0059261_2615	0.88	+0.3
2,704,425	-		Ga0059261_2615	0.88	+0.1
2,704,425	-		Ga0059261_2615	0.88	+0.1
2,704,425	-		Ga0059261_2615	0.88	+0.5
2,704,425	-		Ga0059261_2615	0.88	+1.8