Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01357

Experiment: PYE with sodium fluoride 7.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with sodium fluoride 7.5 mM
1,471,319	+		CCNA_01356	0.49	-1.0
1,471,319	+		CCNA_01356	0.49	-2.7
1,471,320	-		CCNA_01356	0.49	+0.7
1,471,327	-		CCNA_01356	0.50	-0.2
1,471,377	-		CCNA_01356	0.52	-0.9
1,471,390	-		CCNA_01356	0.53	+0.9
1,471,424	+		CCNA_01356	0.55	-1.9
1,471,434	-		CCNA_01356	0.55	-2.1
1,471,434	-		CCNA_01356	0.55	+0.1
1,471,495	+		CCNA_01356	0.58	-0.5
1,471,539	+		CCNA_01356	0.61	-0.1
1,471,547	+		CCNA_01356	0.61	+0.8
1,471,560	-		CCNA_01356	0.62	-1.8
1,471,564	+		CCNA_01356	0.62	+0.0
1,471,564	+		CCNA_01356	0.62	+0.8
1,471,564	+		CCNA_01356	0.62	+0.6
1,471,572	-		CCNA_01356	0.62	-0.0
1,471,581	-		CCNA_01356	0.63	-0.6
1,471,581	-		CCNA_01356	0.63	-0.0
1,471,614	-		CCNA_01356	0.64	-1.1
1,471,694	-		CCNA_01356	0.69	-0.3
1,471,707	-		CCNA_01356	0.69	+0.3
1,471,738	+		CCNA_01356	0.71	+0.3
1,471,779	-		CCNA_01356	0.73	-1.1
1,471,792	+		CCNA_01356	0.74	-1.8
1,471,865	+		CCNA_01356	0.78	+1.2
1,471,873	-		CCNA_01356	0.78	-0.5
1,471,888	+		CCNA_01356	0.79	-0.2
1,471,921	+		CCNA_01356	0.80	-0.9
1,471,927	-		CCNA_01356	0.81	+0.8
1,471,929	-		CCNA_01356	0.81	-1.1
1,471,964	+		CCNA_01356	0.83	-0.0
1,471,972	-		CCNA_01356	0.83	-1.0
1,471,987	-		CCNA_01356	0.84	+0.6
1,472,057	+		CCNA_01356	0.87	-0.5
1,472,076	+		CCNA_01356	0.88	-0.0
1,472,113	-				-1.2
1,472,114	-				-0.2
1,472,124	+				-1.5
1,472,147	-				+0.2
1,472,238	+				-0.2
1,472,246	-				-0.5
1,472,257	+				+1.2
1,472,258	-				+2.3
1,472,277	-				+1.5
1,472,303	+				+1.8
1,472,303	+				-0.9
1,472,341	-				-0.9
1,472,384	-				-0.2
1,472,389	-				+1.0
1,472,398	+				-1.3
1,472,419	+				+1.2
1,472,444	+				-0.5
1,472,473	-				-1.1
1,472,473	-				-2.5
1,472,500	-		CCNA_01357	0.11	-0.1
1,472,521	-		CCNA_01357	0.12	+0.1
1,472,582	-		CCNA_01357	0.15	-0.7
1,472,606	+		CCNA_01357	0.17	-0.1
1,472,606	+		CCNA_01357	0.17	-1.2
1,472,606	+		CCNA_01357	0.17	-0.0
1,472,614	-		CCNA_01357	0.17	-2.0
1,472,614	-		CCNA_01357	0.17	-0.7
1,472,619	-		CCNA_01357	0.17	-1.7
1,472,653	+		CCNA_01357	0.19	+0.5
1,472,670	+		CCNA_01357	0.20	-1.0
1,472,684	-		CCNA_01357	0.21	+0.4
1,472,687	-		CCNA_01357	0.21	-0.8
1,472,693	+		CCNA_01357	0.21	-2.5
1,472,754	+		CCNA_01357	0.25	-1.7
1,472,867	+		CCNA_01357	0.31	-1.6
1,472,867	+		CCNA_01357	0.31	-0.5
1,472,887	-		CCNA_01357	0.32	-1.3
1,472,887	-		CCNA_01357	0.32	-1.1
1,472,922	-		CCNA_01357	0.34	-0.1
1,472,974	+		CCNA_01357	0.37	+0.5
1,472,974	+		CCNA_01357	0.37	-0.0
1,472,974	+		CCNA_01357	0.37	-0.2
1,472,982	-		CCNA_01357	0.37	-0.2
1,472,982	-		CCNA_01357	0.37	-0.9
1,472,982	-		CCNA_01357	0.37	+0.1
1,473,004	+		CCNA_01357	0.38	+0.4
1,473,017	+		CCNA_01357	0.39	+0.8
1,473,020	+		CCNA_01357	0.39	-0.6
1,473,094	-		CCNA_01357	0.43	+1.3
1,473,115	+		CCNA_01357	0.44	+1.2
1,473,131	-		CCNA_01357	0.45	-1.4
1,473,164	-		CCNA_01357	0.47	+0.5
1,473,209	-		CCNA_01357	0.49	-0.5
1,473,223	+		CCNA_01357	0.50	-1.5
1,473,228	-		CCNA_01357	0.50	-0.4
1,473,245	+		CCNA_01357	0.51	-1.6
1,473,252	+		CCNA_01357	0.52	+0.5
1,473,277	+		CCNA_01357	0.53	+1.9
1,473,277	+		CCNA_01357	0.53	-0.7
1,473,280	-		CCNA_01357	0.53	-2.1
1,473,285	-		CCNA_01357	0.53	-1.4
1,473,306	+		CCNA_01357	0.55	-0.2
1,473,346	+		CCNA_01357	0.57	+0.9
1,473,360	-		CCNA_01357	0.57	-0.0
1,473,386	-		CCNA_01357	0.59	-0.4
1,473,464	-		CCNA_01357	0.63	-1.7
1,473,512	+		CCNA_01357	0.66	-1.3
1,473,518	+		CCNA_01357	0.66	+0.7
1,473,530	+		CCNA_01357	0.67	-0.1
1,473,568	+		CCNA_01357	0.69	-0.9
1,473,593	-		CCNA_01357	0.70	+0.5
1,473,608	-		CCNA_01357	0.71	-0.5
1,473,611	+		CCNA_01357	0.71	+0.5
1,473,611	+		CCNA_01357	0.71	-1.5
1,473,617	+		CCNA_01357	0.71	+0.1
1,473,632	+		CCNA_01357	0.72	-1.0
1,473,632	+		CCNA_01357	0.72	-2.2
1,473,632	+		CCNA_01357	0.72	-0.5
1,473,642	-		CCNA_01357	0.73	+0.1
1,473,675	-		CCNA_01357	0.75	-0.7
1,473,686	+		CCNA_01357	0.75	+0.4
1,473,686	+		CCNA_01357	0.75	-2.1
1,473,734	-		CCNA_01357	0.78	-0.0
1,473,776	+		CCNA_01357	0.80	-0.2
1,473,776	+		CCNA_01357	0.80	-0.2
1,473,777	-		CCNA_01357	0.80	-0.0
1,473,784	-		CCNA_01357	0.80	+0.3
1,473,791	+		CCNA_01357	0.81	-0.2
1,473,807	+		CCNA_01357	0.82	+0.2
1,473,836	+		CCNA_01357	0.83	-0.9
1,473,844	-				+1.2
1,473,846	-		CCNA_01357	0.84	-0.4
1,473,873	-		CCNA_01357	0.85	+0.2
1,473,880	-		CCNA_01357	0.86	+1.1
1,473,911	-		CCNA_01357	0.87	+0.7
1,473,932	-		CCNA_01357	0.88	+0.2
1,473,988	+				-0.4
1,473,996	-				-2.2
1,474,003	+				+0.4
1,474,009	-				+0.5
1,474,036	-				-0.9
1,474,067	-				-1.1
1,474,068	+				-0.4
1,474,109	+				-0.0
1,474,129	+				+0.8
1,474,129	+				-2.1
1,474,138	+				-0.4
1,474,138	+				-0.5
1,474,144	+				+1.3
1,474,144	+				-2.1
1,474,146	-				-1.0
1,474,146	-				-0.2
1,474,146	-				+0.5
1,474,166	-				-0.5
1,474,220	+				-1.1
1,474,289	-		CCNA_01358	0.16	-0.2
1,474,289	-		CCNA_01358	0.16	+0.5
1,474,332	+		CCNA_01358	0.20	+1.2
1,474,340	-		CCNA_01358	0.21	-2.0
1,474,340	-		CCNA_01358	0.21	-1.7
1,474,423	+		CCNA_01358	0.31	-0.4
1,474,423	+		CCNA_01358	0.31	-1.1
1,474,423	+		CCNA_01358	0.31	+0.7
1,474,423	+		CCNA_01358	0.31	+0.1
1,474,423	+		CCNA_01358	0.31	-0.1
1,474,423	+		CCNA_01358	0.31	-0.6
1,474,423	+		CCNA_01358	0.31	-1.1
1,474,423	+		CCNA_01358	0.31	+1.9
1,474,423	+		CCNA_01358	0.31	-0.7
1,474,423	+		CCNA_01358	0.31	+0.8
1,474,423	+		CCNA_01358	0.31	+0.8
1,474,431	-		CCNA_01358	0.31	-2.1
1,474,431	-		CCNA_01358	0.31	+2.5
1,474,431	-		CCNA_01358	0.31	-1.4
1,474,431	-		CCNA_01358	0.31	-1.5
1,474,431	-		CCNA_01358	0.31	-1.1
1,474,435	+		CCNA_01358	0.32	-0.5
1,474,435	+		CCNA_01358	0.32	+0.2
1,474,437	+		CCNA_01358	0.32	-1.3
1,474,437	+		CCNA_01358	0.32	+0.6
1,474,445	+		CCNA_01358	0.33	+0.3
1,474,445	+		CCNA_01358	0.33	+0.5
1,474,445	-		CCNA_01358	0.33	-1.6
1,474,445	-		CCNA_01358	0.33	-1.7
1,474,445	-		CCNA_01358	0.33	-1.5
1,474,447	+		CCNA_01358	0.33	+0.2
1,474,448	-		CCNA_01358	0.33	-1.5
1,474,448	-		CCNA_01358	0.33	-1.0
1,474,453	-		CCNA_01358	0.34	-1.8
1,474,453	-		CCNA_01358	0.34	-1.0
1,474,453	-		CCNA_01358	0.34	-0.2
1,474,536	-		CCNA_01358	0.43	+0.3
1,474,540	+		CCNA_01358	0.44	-0.5
1,474,548	-		CCNA_01358	0.44	-0.2
1,474,594	-		CCNA_01358	0.50	-0.8
1,474,594	-		CCNA_01358	0.50	-0.2
1,474,618	-		CCNA_01358	0.52	-0.7
1,474,620	-		CCNA_01358	0.52	-0.7
1,474,624	+		CCNA_01358	0.53	-1.4
1,474,706	+		CCNA_01358	0.62	-1.8
1,474,724	-		CCNA_01358	0.64	-2.3
1,474,743	-		CCNA_01358	0.66	-1.3
1,474,745	+		CCNA_01358	0.66	+0.5
1,474,753	-		CCNA_01358	0.67	+0.3
1,474,769	-		CCNA_01358	0.69	-1.4
1,474,771	+		CCNA_01358	0.69	-0.9
1,474,779	-		CCNA_01358	0.70	+1.1
1,474,779	-		CCNA_01358	0.70	-0.9
1,474,847	+		CCNA_01358	0.78	-1.1
1,474,860	-		CCNA_01358	0.79	-2.2
1,474,862	+		CCNA_01358	0.79	+0.9
1,474,862	-		CCNA_01358	0.79	-1.7
1,474,885	-		CCNA_01358	0.82	-0.1
1,474,885	-		CCNA_01358	0.82	-0.2
1,474,890	-		CCNA_01358	0.82	-1.5
1,474,903	+		CCNA_01358	0.84	-1.2
1,474,965	+				-0.5
1,475,020	-				-1.5
1,475,032	+				+0.5
1,475,032	+				-1.0
1,475,038	-				-0.2
1,475,038	-				-0.3
1,475,078	-				-1.8