Experiment: nitrate 45 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_460 and Ac3H11_461 are separated by 20 nucleotides Ac3H11_461 and Ac3H11_462 are separated by 137 nucleotides Ac3H11_462 and Ac3H11_463 overlap by 47 nucleotides
Ac3H11_460 - Phosphate transport system regulatory protein PhoU, at 150,689 to 151,390
_460
Ac3H11_461 - Phosphate regulon transcriptional regulatory protein PhoB (SphR), at 151,411 to 152,121
_461
Ac3H11_462 - Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3), at 152,259 to 153,602
_462
Ac3H11_463 - Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog, at 153,556 to 154,923
_463
Position (kb) 152
153
154 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 151.326 kb on - strand at 151.326 kb on - strand at 151.326 kb on - strand at 151.326 kb on - strand at 151.326 kb on - strand at 151.410 kb on + strand at 151.410 kb on + strand at 151.410 kb on + strand at 151.410 kb on + strand at 151.411 kb on - strand at 151.720 kb on + strand, within Ac3H11_461 at 151.720 kb on + strand, within Ac3H11_461 at 151.720 kb on + strand, within Ac3H11_461 at 151.847 kb on - strand, within Ac3H11_461 at 151.847 kb on - strand, within Ac3H11_461 at 151.858 kb on + strand, within Ac3H11_461 at 151.888 kb on - strand, within Ac3H11_461 at 151.938 kb on + strand, within Ac3H11_461 at 152.176 kb on + strand at 152.177 kb on - strand at 152.177 kb on - strand at 152.204 kb on - strand at 152.204 kb on - strand at 152.277 kb on + strand at 152.277 kb on + strand at 152.712 kb on + strand, within Ac3H11_462 at 152.713 kb on - strand, within Ac3H11_462 at 153.238 kb on + strand, within Ac3H11_462 at 153.716 kb on + strand, within Ac3H11_463 at 153.717 kb on - strand, within Ac3H11_463 at 153.728 kb on + strand, within Ac3H11_463 at 153.767 kb on + strand, within Ac3H11_463 at 153.767 kb on + strand, within Ac3H11_463 at 153.767 kb on + strand, within Ac3H11_463 at 153.767 kb on + strand, within Ac3H11_463 at 153.767 kb on + strand, within Ac3H11_463 at 153.767 kb on + strand, within Ac3H11_463 at 153.768 kb on - strand, within Ac3H11_463 at 153.797 kb on + strand, within Ac3H11_463 at 153.862 kb on + strand, within Ac3H11_463 at 153.862 kb on + strand, within Ac3H11_463 at 153.863 kb on - strand, within Ac3H11_463 at 153.909 kb on - strand, within Ac3H11_463 at 153.936 kb on + strand, within Ac3H11_463 at 153.960 kb on + strand, within Ac3H11_463 at 153.988 kb on + strand, within Ac3H11_463 at 153.990 kb on + strand, within Ac3H11_463 at 154.037 kb on + strand, within Ac3H11_463 at 154.037 kb on + strand, within Ac3H11_463 at 154.038 kb on - strand, within Ac3H11_463 at 154.038 kb on - strand, within Ac3H11_463 at 154.085 kb on + strand, within Ac3H11_463 at 154.085 kb on + strand, within Ac3H11_463 at 154.085 kb on + strand, within Ac3H11_463 at 154.085 kb on + strand, within Ac3H11_463 at 154.085 kb on + strand, within Ac3H11_463 at 154.085 kb on + strand, within Ac3H11_463 at 154.086 kb on - strand, within Ac3H11_463 at 154.086 kb on - strand, within Ac3H11_463 at 154.086 kb on - strand, within Ac3H11_463 at 154.086 kb on - strand, within Ac3H11_463 at 154.287 kb on - strand, within Ac3H11_463 at 154.287 kb on - strand, within Ac3H11_463 at 154.499 kb on + strand, within Ac3H11_463 at 154.499 kb on + strand, within Ac3H11_463 at 154.499 kb on + strand, within Ac3H11_463 at 154.499 kb on + strand, within Ac3H11_463 at 154.499 kb on + strand, within Ac3H11_463 at 154.500 kb on - strand, within Ac3H11_463 at 154.500 kb on - strand, within Ac3H11_463 at 154.500 kb on - strand, within Ac3H11_463 at 154.500 kb on - strand, within Ac3H11_463 at 154.550 kb on + strand, within Ac3H11_463 at 154.550 kb on + strand, within Ac3H11_463 at 154.550 kb on + strand, within Ac3H11_463 at 154.551 kb on - strand, within Ac3H11_463 at 154.551 kb on - strand, within Ac3H11_463 at 154.551 kb on - strand, within Ac3H11_463 at 154.551 kb on - strand, within Ac3H11_463
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate 45 mM remove 151,326 - +0.3 151,326 - +0.6 151,326 - -0.3 151,326 - -0.4 151,326 - -1.1 151,410 + +0.0 151,410 + -1.4 151,410 + +0.1 151,410 + +1.1 151,411 - +0.2 151,720 + Ac3H11_461 0.43 +0.8 151,720 + Ac3H11_461 0.43 +0.5 151,720 + Ac3H11_461 0.43 +0.1 151,847 - Ac3H11_461 0.61 -2.6 151,847 - Ac3H11_461 0.61 -0.4 151,858 + Ac3H11_461 0.63 +0.6 151,888 - Ac3H11_461 0.67 +0.8 151,938 + Ac3H11_461 0.74 -0.0 152,176 + -0.1 152,177 - +0.9 152,177 - +0.8 152,204 - -0.4 152,204 - +0.0 152,277 + -1.0 152,277 + +0.2 152,712 + Ac3H11_462 0.34 +0.6 152,713 - Ac3H11_462 0.34 +1.1 153,238 + Ac3H11_462 0.73 -0.5 153,716 + Ac3H11_463 0.12 -0.6 153,717 - Ac3H11_463 0.12 -0.2 153,728 + Ac3H11_463 0.13 +1.2 153,767 + Ac3H11_463 0.15 -0.3 153,767 + Ac3H11_463 0.15 +0.7 153,767 + Ac3H11_463 0.15 -0.1 153,767 + Ac3H11_463 0.15 -1.0 153,767 + Ac3H11_463 0.15 -0.2 153,767 + Ac3H11_463 0.15 +0.0 153,768 - Ac3H11_463 0.15 +0.3 153,797 + Ac3H11_463 0.18 +0.3 153,862 + Ac3H11_463 0.22 -0.2 153,862 + Ac3H11_463 0.22 +1.2 153,863 - Ac3H11_463 0.22 +0.1 153,909 - Ac3H11_463 0.26 +0.4 153,936 + Ac3H11_463 0.28 +0.1 153,960 + Ac3H11_463 0.30 +0.8 153,988 + Ac3H11_463 0.32 +0.1 153,990 + Ac3H11_463 0.32 -0.8 154,037 + Ac3H11_463 0.35 +0.8 154,037 + Ac3H11_463 0.35 +0.1 154,038 - Ac3H11_463 0.35 -1.3 154,038 - Ac3H11_463 0.35 -0.5 154,085 + Ac3H11_463 0.39 +2.3 154,085 + Ac3H11_463 0.39 -0.4 154,085 + Ac3H11_463 0.39 -0.4 154,085 + Ac3H11_463 0.39 -0.3 154,085 + Ac3H11_463 0.39 +0.2 154,085 + Ac3H11_463 0.39 -0.3 154,086 - Ac3H11_463 0.39 -1.2 154,086 - Ac3H11_463 0.39 -0.7 154,086 - Ac3H11_463 0.39 +1.2 154,086 - Ac3H11_463 0.39 +0.9 154,287 - Ac3H11_463 0.53 -3.0 154,287 - Ac3H11_463 0.53 -0.2 154,499 + Ac3H11_463 0.69 +1.5 154,499 + Ac3H11_463 0.69 +0.5 154,499 + Ac3H11_463 0.69 +0.2 154,499 + Ac3H11_463 0.69 +0.6 154,499 + Ac3H11_463 0.69 +0.1 154,500 - Ac3H11_463 0.69 -0.6 154,500 - Ac3H11_463 0.69 +0.2 154,500 - Ac3H11_463 0.69 -0.7 154,500 - Ac3H11_463 0.69 +1.0 154,550 + Ac3H11_463 0.73 -0.0 154,550 + Ac3H11_463 0.73 -1.0 154,550 + Ac3H11_463 0.73 -0.5 154,551 - Ac3H11_463 0.73 -0.3 154,551 - Ac3H11_463 0.73 +0.6 154,551 - Ac3H11_463 0.73 -0.1 154,551 - Ac3H11_463 0.73 +0.1
Or see this region's nucleotide sequence