Experiment: nitrate 45 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2716 and Ac3H11_2717 are separated by 219 nucleotides Ac3H11_2717 and Ac3H11_2718 are separated by 10 nucleotides
Ac3H11_2716 - BarH, at 1,017,301 to 1,018,608
_2716
Ac3H11_2717 - Acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor (EC 1.3.99.13), at 1,018,828 to 1,019,817
_2717
Ac3H11_2718 - Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2), at 1,019,828 to 1,020,925
_2718
Position (kb)
1018
1019
1020 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1017.880 kb on + strand, within Ac3H11_2716 at 1018.077 kb on + strand, within Ac3H11_2716 at 1018.078 kb on - strand, within Ac3H11_2716 at 1018.115 kb on - strand, within Ac3H11_2716 at 1018.606 kb on + strand at 1018.670 kb on - strand at 1018.847 kb on - strand at 1018.847 kb on - strand at 1018.880 kb on - strand at 1018.996 kb on + strand, within Ac3H11_2717 at 1018.997 kb on - strand, within Ac3H11_2717 at 1018.997 kb on - strand, within Ac3H11_2717 at 1018.997 kb on - strand, within Ac3H11_2717 at 1019.026 kb on + strand, within Ac3H11_2717 at 1019.027 kb on - strand, within Ac3H11_2717 at 1019.173 kb on + strand, within Ac3H11_2717 at 1019.173 kb on + strand, within Ac3H11_2717 at 1019.173 kb on + strand, within Ac3H11_2717 at 1019.173 kb on + strand, within Ac3H11_2717 at 1019.173 kb on + strand, within Ac3H11_2717 at 1019.173 kb on + strand, within Ac3H11_2717 at 1019.174 kb on - strand, within Ac3H11_2717 at 1019.174 kb on - strand, within Ac3H11_2717 at 1019.174 kb on - strand, within Ac3H11_2717 at 1019.174 kb on - strand, within Ac3H11_2717 at 1019.174 kb on - strand, within Ac3H11_2717 at 1019.206 kb on - strand, within Ac3H11_2717 at 1019.327 kb on - strand, within Ac3H11_2717 at 1020.240 kb on + strand, within Ac3H11_2718 at 1020.240 kb on + strand, within Ac3H11_2718 at 1020.241 kb on - strand, within Ac3H11_2718
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate 45 mM remove 1,017,880 + Ac3H11_2716 0.44 -0.4 1,018,077 + Ac3H11_2716 0.59 -0.4 1,018,078 - Ac3H11_2716 0.59 +0.0 1,018,115 - Ac3H11_2716 0.62 -0.2 1,018,606 + -0.4 1,018,670 - -0.4 1,018,847 - +0.3 1,018,847 - +1.3 1,018,880 - -1.1 1,018,996 + Ac3H11_2717 0.17 -0.2 1,018,997 - Ac3H11_2717 0.17 +1.3 1,018,997 - Ac3H11_2717 0.17 -3.6 1,018,997 - Ac3H11_2717 0.17 +0.0 1,019,026 + Ac3H11_2717 0.20 -0.2 1,019,027 - Ac3H11_2717 0.20 -0.3 1,019,173 + Ac3H11_2717 0.35 -0.9 1,019,173 + Ac3H11_2717 0.35 +1.5 1,019,173 + Ac3H11_2717 0.35 +0.8 1,019,173 + Ac3H11_2717 0.35 +1.8 1,019,173 + Ac3H11_2717 0.35 +0.2 1,019,173 + Ac3H11_2717 0.35 +0.7 1,019,174 - Ac3H11_2717 0.35 +0.9 1,019,174 - Ac3H11_2717 0.35 +0.5 1,019,174 - Ac3H11_2717 0.35 +0.5 1,019,174 - Ac3H11_2717 0.35 +0.0 1,019,174 - Ac3H11_2717 0.35 -0.3 1,019,206 - Ac3H11_2717 0.38 +0.0 1,019,327 - Ac3H11_2717 0.50 -1.8 1,020,240 + Ac3H11_2718 0.38 -0.1 1,020,240 + Ac3H11_2718 0.38 -1.1 1,020,241 - Ac3H11_2718 0.38 +1.6
Or see this region's nucleotide sequence