Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_27410
Experiment: Spectinomycin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Spectinomycin 0.2 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 5,986,584 | + | AO353_27400 | 0.65 | -1.0 | |
| 5,986,584 | + | AO353_27400 | 0.65 | +0.9 | |
| 5,986,584 | + | AO353_27400 | 0.65 | -1.9 | |
| 5,986,584 | + | AO353_27400 | 0.65 | +0.9 | |
| 5,986,584 | + | AO353_27400 | 0.65 | -0.4 | |
| 5,986,621 | + | AO353_27400 | 0.80 | -0.4 | |
| 5,986,621 | + | AO353_27400 | 0.80 | -0.4 | |
| 5,986,673 | + | -1.6 | |||
| 5,987,558 | - | AO353_27410 | 0.42 | -2.3 | |
| 5,987,562 | - | AO353_27410 | 0.43 | +2.8 | |
| 5,987,596 | - | AO353_27410 | 0.56 | +0.9 | |
| 5,987,642 | + | AO353_27410 | 0.72 | +0.4 | |
| 5,987,642 | + | AO353_27410 | 0.72 | +3.1 | |
| 5,987,642 | + | AO353_27410 | 0.72 | -2.4 | |
| 5,987,740 | - | -0.9 | |||
| 5,987,740 | - | -0.4 | |||
| 5,987,751 | + | -0.9 | |||
| 5,987,800 | + | -1.0 | |||
| 5,987,801 | - | -0.3 | |||
| 5,987,809 | + | +1.3 | |||
| 5,987,933 | - | -1.0 | |||
| 5,988,073 | - | -0.3 | |||
| 5,988,331 | - | +0.5 | |||
| 5,988,410 | - | -0.2 | |||
| 5,988,550 | - | +1.0 | |||
| 5,988,719 | - | -0.5 |
Or see this region's nucleotide sequence