Experiment: Spectinomycin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26095 and AO353_26100 are separated by 901 nucleotides AO353_26100 and AO353_26105 overlap by 4 nucleotides AO353_26105 and AO353_26110 are separated by 58 nucleotides
AO353_26095: AO353_26095 - hypothetical protein, at 5,745,401 to 5,745,580
_26095
AO353_26100: AO353_26100 - lysozyme, at 5,746,482 to 5,747,009
_26100
AO353_26105: AO353_26105 - structural protein P5, at 5,747,006 to 5,747,455
_26105
AO353_26110: AO353_26110 - hypothetical protein, at 5,747,514 to 5,747,870
_26110
Position (kb) 5746
5747
5748 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5745.571 kb on - strand at 5745.574 kb on + strand at 5745.625 kb on + strand at 5745.632 kb on + strand at 5745.645 kb on + strand at 5745.648 kb on - strand at 5745.725 kb on + strand at 5745.725 kb on + strand at 5745.725 kb on + strand at 5745.949 kb on - strand at 5746.161 kb on + strand at 5746.225 kb on - strand at 5746.255 kb on - strand at 5746.267 kb on - strand at 5746.285 kb on + strand at 5746.415 kb on + strand at 5746.416 kb on - strand at 5746.450 kb on + strand at 5746.483 kb on + strand at 5746.483 kb on + strand at 5746.484 kb on - strand at 5746.507 kb on - strand at 5746.507 kb on - strand at 5746.510 kb on + strand at 5746.510 kb on + strand at 5746.511 kb on - strand at 5746.511 kb on - strand at 5746.698 kb on + strand, within AO353_26100 at 5746.699 kb on - strand, within AO353_26100 at 5746.699 kb on - strand, within AO353_26100 at 5747.176 kb on - strand, within AO353_26105 at 5747.176 kb on - strand, within AO353_26105 at 5747.263 kb on + strand, within AO353_26105 at 5747.263 kb on + strand, within AO353_26105 at 5747.263 kb on + strand, within AO353_26105 at 5747.263 kb on + strand, within AO353_26105 at 5747.400 kb on + strand, within AO353_26105 at 5747.400 kb on + strand, within AO353_26105 at 5747.401 kb on - strand, within AO353_26105 at 5747.472 kb on - strand at 5747.472 kb on - strand at 5747.486 kb on + strand at 5747.611 kb on + strand, within AO353_26110 at 5747.612 kb on - strand, within AO353_26110 at 5747.612 kb on - strand, within AO353_26110 at 5747.612 kb on - strand, within AO353_26110 at 5747.623 kb on + strand, within AO353_26110 at 5747.623 kb on + strand, within AO353_26110 at 5747.623 kb on + strand, within AO353_26110 at 5747.624 kb on - strand, within AO353_26110 at 5747.624 kb on - strand, within AO353_26110 at 5747.624 kb on - strand, within AO353_26110 at 5747.705 kb on - strand, within AO353_26110 at 5747.765 kb on - strand, within AO353_26110 at 5747.765 kb on - strand, within AO353_26110 at 5747.824 kb on + strand, within AO353_26110 at 5747.824 kb on + strand, within AO353_26110 at 5747.824 kb on + strand, within AO353_26110 at 5747.825 kb on - strand, within AO353_26110 at 5747.825 kb on - strand, within AO353_26110 at 5747.848 kb on - strand at 5747.848 kb on - strand at 5747.848 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Spectinomycin 0.2 mg/ml remove 5,745,571 - +0.2 5,745,574 + -0.2 5,745,625 + -0.8 5,745,632 + -1.0 5,745,645 + -1.0 5,745,648 - -0.2 5,745,725 + +1.6 5,745,725 + +0.1 5,745,725 + -0.8 5,745,949 - -2.5 5,746,161 + -1.1 5,746,225 - -0.4 5,746,255 - -0.6 5,746,267 - +2.0 5,746,285 + +0.4 5,746,415 + +1.2 5,746,416 - +0.1 5,746,450 + +1.2 5,746,483 + -1.8 5,746,483 + +0.4 5,746,484 - -0.0 5,746,507 - +0.9 5,746,507 - -1.2 5,746,510 + +0.4 5,746,510 + -1.2 5,746,511 - +0.2 5,746,511 - +0.5 5,746,698 + AO353_26100 0.41 -2.0 5,746,699 - AO353_26100 0.41 -0.3 5,746,699 - AO353_26100 0.41 -1.7 5,747,176 - AO353_26105 0.38 -0.2 5,747,176 - AO353_26105 0.38 -0.2 5,747,263 + AO353_26105 0.57 -0.9 5,747,263 + AO353_26105 0.57 +1.5 5,747,263 + AO353_26105 0.57 -0.1 5,747,263 + AO353_26105 0.57 +0.1 5,747,400 + AO353_26105 0.88 -2.5 5,747,400 + AO353_26105 0.88 +0.6 5,747,401 - AO353_26105 0.88 +0.7 5,747,472 - -0.4 5,747,472 - -0.5 5,747,486 + -0.7 5,747,611 + AO353_26110 0.27 -0.0 5,747,612 - AO353_26110 0.27 -2.0 5,747,612 - AO353_26110 0.27 -1.8 5,747,612 - AO353_26110 0.27 -2.6 5,747,623 + AO353_26110 0.31 -0.2 5,747,623 + AO353_26110 0.31 -0.3 5,747,623 + AO353_26110 0.31 -0.5 5,747,624 - AO353_26110 0.31 +1.7 5,747,624 - AO353_26110 0.31 +1.2 5,747,624 - AO353_26110 0.31 -0.0 5,747,705 - AO353_26110 0.54 +1.0 5,747,765 - AO353_26110 0.70 -0.3 5,747,765 - AO353_26110 0.70 -1.8 5,747,824 + AO353_26110 0.87 +0.8 5,747,824 + AO353_26110 0.87 +0.2 5,747,824 + AO353_26110 0.87 -0.4 5,747,825 - AO353_26110 0.87 -1.9 5,747,825 - AO353_26110 0.87 +0.5 5,747,848 - +0.4 5,747,848 - +1.2 5,747,848 - -2.2
Or see this region's nucleotide sequence