Experiment: Spectinomycin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22925 and AO353_22930 are separated by 195 nucleotides AO353_22930 and AO353_22935 are separated by 207 nucleotides
AO353_22925: AO353_22925 - (Fe-S)-binding protein, at 5,031,387 to 5,032,799
_22925
AO353_22930: AO353_22930 - hypothetical protein, at 5,032,995 to 5,033,228
_22930
AO353_22935: AO353_22935 - alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase, at 5,033,436 to 5,035,433
_22935
Position (kb) 5032
5033
5034 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5032.120 kb on + strand, within AO353_22925 at 5032.121 kb on - strand, within AO353_22925 at 5032.121 kb on - strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.130 kb on + strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.131 kb on - strand, within AO353_22925 at 5032.172 kb on - strand, within AO353_22925 at 5032.172 kb on - strand, within AO353_22925 at 5032.172 kb on - strand, within AO353_22925 at 5032.454 kb on - strand, within AO353_22925 at 5032.770 kb on + strand at 5032.770 kb on + strand at 5032.770 kb on + strand at 5032.770 kb on + strand at 5032.770 kb on + strand at 5032.771 kb on - strand at 5032.771 kb on - strand at 5032.774 kb on - strand at 5032.790 kb on + strand at 5032.791 kb on - strand at 5032.791 kb on - strand at 5032.837 kb on + strand at 5032.838 kb on - strand at 5032.859 kb on + strand at 5033.055 kb on + strand, within AO353_22930 at 5033.061 kb on + strand, within AO353_22930 at 5033.089 kb on + strand, within AO353_22930 at 5033.089 kb on + strand, within AO353_22930 at 5033.090 kb on - strand, within AO353_22930 at 5033.090 kb on - strand, within AO353_22930 at 5033.254 kb on + strand at 5033.254 kb on + strand at 5033.254 kb on + strand at 5033.254 kb on + strand at 5033.255 kb on - strand at 5033.255 kb on - strand at 5033.255 kb on - strand at 5033.299 kb on + strand at 5033.366 kb on + strand at 5033.366 kb on + strand at 5033.366 kb on + strand at 5033.366 kb on + strand at 5033.366 kb on + strand at 5033.367 kb on - strand at 5033.367 kb on - strand at 5033.367 kb on - strand at 5033.367 kb on - strand at 5033.370 kb on + strand at 5033.370 kb on + strand at 5033.370 kb on + strand at 5033.371 kb on - strand at 5033.420 kb on + strand at 5033.466 kb on + strand at 5033.466 kb on + strand at 5033.466 kb on + strand at 5033.467 kb on - strand at 5033.467 kb on - strand at 5033.467 kb on - strand at 5033.467 kb on - strand at 5033.467 kb on - strand at 5033.514 kb on - strand at 5033.514 kb on - strand at 5033.514 kb on - strand at 5033.514 kb on - strand at 5033.514 kb on - strand at 5033.514 kb on - strand at 5033.567 kb on + strand at 5033.585 kb on - strand at 5033.594 kb on + strand at 5033.594 kb on + strand at 5033.595 kb on - strand at 5033.595 kb on - strand at 5033.595 kb on - strand at 5033.699 kb on + strand, within AO353_22935 at 5033.699 kb on + strand, within AO353_22935 at 5033.699 kb on + strand, within AO353_22935 at 5033.699 kb on + strand, within AO353_22935 at 5033.700 kb on - strand, within AO353_22935 at 5034.013 kb on - strand, within AO353_22935 at 5034.078 kb on + strand, within AO353_22935 at 5034.078 kb on + strand, within AO353_22935 at 5034.079 kb on - strand, within AO353_22935 at 5034.125 kb on + strand, within AO353_22935 at 5034.126 kb on - strand, within AO353_22935 at 5034.126 kb on - strand, within AO353_22935 at 5034.126 kb on - strand, within AO353_22935 at 5034.186 kb on + strand, within AO353_22935 at 5034.186 kb on + strand, within AO353_22935 at 5034.186 kb on + strand, within AO353_22935 at 5034.186 kb on + strand, within AO353_22935
Per-strain Table
Position Strand Gene LocusTag Fraction Spectinomycin 0.2 mg/ml remove 5,032,120 + AO353_22925 0.52 +0.6 5,032,121 - AO353_22925 0.52 -0.3 5,032,121 - AO353_22925 0.52 -0.3 5,032,130 + AO353_22925 0.53 +0.8 5,032,130 + AO353_22925 0.53 -0.3 5,032,130 + AO353_22925 0.53 -0.8 5,032,130 + AO353_22925 0.53 -0.5 5,032,130 + AO353_22925 0.53 +2.7 5,032,130 + AO353_22925 0.53 -0.6 5,032,130 + AO353_22925 0.53 +0.5 5,032,130 + AO353_22925 0.53 -0.1 5,032,130 + AO353_22925 0.53 -0.7 5,032,130 + AO353_22925 0.53 +1.5 5,032,130 + AO353_22925 0.53 -0.5 5,032,130 + AO353_22925 0.53 +1.7 5,032,130 + AO353_22925 0.53 +1.5 5,032,130 + AO353_22925 0.53 +1.1 5,032,130 + AO353_22925 0.53 +1.4 5,032,130 + AO353_22925 0.53 +0.3 5,032,130 + AO353_22925 0.53 +0.8 5,032,130 + AO353_22925 0.53 +1.8 5,032,130 + AO353_22925 0.53 +0.3 5,032,130 + AO353_22925 0.53 +0.3 5,032,130 + AO353_22925 0.53 +1.0 5,032,130 + AO353_22925 0.53 +0.6 5,032,130 + AO353_22925 0.53 -0.5 5,032,130 + AO353_22925 0.53 -0.2 5,032,130 + AO353_22925 0.53 +1.7 5,032,131 - AO353_22925 0.53 +1.0 5,032,131 - AO353_22925 0.53 +1.3 5,032,131 - AO353_22925 0.53 +1.8 5,032,131 - AO353_22925 0.53 -0.3 5,032,131 - AO353_22925 0.53 +0.5 5,032,131 - AO353_22925 0.53 +1.4 5,032,131 - AO353_22925 0.53 -1.1 5,032,131 - AO353_22925 0.53 -1.9 5,032,131 - AO353_22925 0.53 -1.3 5,032,131 - AO353_22925 0.53 +0.2 5,032,131 - AO353_22925 0.53 -1.7 5,032,131 - AO353_22925 0.53 +0.0 5,032,131 - AO353_22925 0.53 -1.7 5,032,131 - AO353_22925 0.53 +0.5 5,032,131 - AO353_22925 0.53 +0.0 5,032,131 - AO353_22925 0.53 -0.5 5,032,131 - AO353_22925 0.53 -0.1 5,032,131 - AO353_22925 0.53 -0.5 5,032,131 - AO353_22925 0.53 +1.4 5,032,131 - AO353_22925 0.53 -0.2 5,032,131 - AO353_22925 0.53 +0.0 5,032,131 - AO353_22925 0.53 +2.1 5,032,131 - AO353_22925 0.53 -1.5 5,032,131 - AO353_22925 0.53 +0.1 5,032,131 - AO353_22925 0.53 -0.5 5,032,131 - AO353_22925 0.53 +0.0 5,032,131 - AO353_22925 0.53 -0.1 5,032,131 - AO353_22925 0.53 +0.9 5,032,172 - AO353_22925 0.56 +0.5 5,032,172 - AO353_22925 0.56 +0.5 5,032,172 - AO353_22925 0.56 +0.4 5,032,454 - AO353_22925 0.76 +0.3 5,032,770 + +0.6 5,032,770 + +0.1 5,032,770 + +0.3 5,032,770 + +1.6 5,032,770 + +1.1 5,032,771 - -0.7 5,032,771 - -0.3 5,032,774 - +0.1 5,032,790 + -0.5 5,032,791 - +0.8 5,032,791 - -0.2 5,032,837 + -0.5 5,032,838 - -0.3 5,032,859 + -1.3 5,033,055 + AO353_22930 0.26 +0.4 5,033,061 + AO353_22930 0.28 -1.3 5,033,089 + AO353_22930 0.40 +0.9 5,033,089 + AO353_22930 0.40 +0.1 5,033,090 - AO353_22930 0.41 +1.9 5,033,090 - AO353_22930 0.41 +0.8 5,033,254 + -1.7 5,033,254 + -0.5 5,033,254 + +0.6 5,033,254 + +0.7 5,033,255 - +1.1 5,033,255 - -1.1 5,033,255 - -0.9 5,033,299 + +0.5 5,033,366 + -0.9 5,033,366 + +0.4 5,033,366 + +0.0 5,033,366 + -1.9 5,033,366 + +1.0 5,033,367 - -1.5 5,033,367 - +1.8 5,033,367 - +0.8 5,033,367 - -1.3 5,033,370 + -1.1 5,033,370 + -0.5 5,033,370 + +1.0 5,033,371 - +1.3 5,033,420 + +0.8 5,033,466 + -1.3 5,033,466 + -1.2 5,033,466 + -2.2 5,033,467 - +0.5 5,033,467 - -0.7 5,033,467 - +0.3 5,033,467 - -0.0 5,033,467 - -0.2 5,033,514 - +1.1 5,033,514 - +2.0 5,033,514 - +1.3 5,033,514 - +0.5 5,033,514 - -0.5 5,033,514 - +0.1 5,033,567 + -0.2 5,033,585 - -0.8 5,033,594 + +1.3 5,033,594 + -0.5 5,033,595 - +0.4 5,033,595 - +0.6 5,033,595 - -0.7 5,033,699 + AO353_22935 0.13 +0.1 5,033,699 + AO353_22935 0.13 -1.5 5,033,699 + AO353_22935 0.13 -0.5 5,033,699 + AO353_22935 0.13 +1.7 5,033,700 - AO353_22935 0.13 +1.3 5,034,013 - AO353_22935 0.29 +0.2 5,034,078 + AO353_22935 0.32 -0.3 5,034,078 + AO353_22935 0.32 +0.3 5,034,079 - AO353_22935 0.32 +0.5 5,034,125 + AO353_22935 0.34 -1.3 5,034,126 - AO353_22935 0.35 -0.7 5,034,126 - AO353_22935 0.35 -0.4 5,034,126 - AO353_22935 0.35 -0.7 5,034,186 + AO353_22935 0.38 -0.3 5,034,186 + AO353_22935 0.38 -1.2 5,034,186 + AO353_22935 0.38 +1.3 5,034,186 + AO353_22935 0.38 +1.7
Or see this region's nucleotide sequence