Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22655

Experiment: Spectinomycin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.2 mg/ml
4,960,340	+				+1.0
4,960,340	+				-0.7
4,960,340	+				-1.3
4,960,340	+				-1.9
4,960,340	+				+1.5
4,960,340	+				+0.6
4,960,341	-				+1.9
4,960,341	-				+0.2
4,960,341	-				+0.8
4,960,341	-				-1.0
4,960,341	-				-0.9
4,960,341	-				+0.6
4,960,341	-				+0.7
4,960,341	-				-0.1
4,960,344	+				-0.7
4,960,344	+				-0.5
4,960,345	-				-0.6
4,960,345	-				+0.1
4,960,401	-				-1.3
4,960,401	-				+0.2
4,960,401	-				-0.7
4,960,401	-				-0.5
4,960,401	-				+0.8
4,960,401	-				-0.7
4,960,449	+				+0.6
4,960,450	-				-0.9
4,960,455	+				-0.4
4,960,455	+				-1.5
4,960,455	+				-0.2
4,960,456	-				-1.0
4,960,470	+				+1.1
4,960,513	+				-0.1
4,960,513	+				+0.1
4,960,514	-				-0.3
4,960,514	-				+1.3
4,960,632	+		AO353_22645	0.37	+0.9
4,960,632	+		AO353_22645	0.37	+0.3
4,960,632	+		AO353_22645	0.37	-2.4
4,960,633	-		AO353_22645	0.38	-0.7
4,960,702	-		AO353_22645	0.70	-0.7
4,960,725	-		AO353_22645	0.81	+2.5
4,960,786	+				-0.9
4,960,786	+				-0.5
4,960,786	+				-0.7
4,960,787	-				-1.3
4,960,811	+				+0.1
4,960,869	+				-1.5
4,960,869	+				-1.0
4,960,869	+				-1.7
4,960,869	+				-2.8
4,960,869	+				+0.3
4,960,870	-				-2.4
4,960,891	+				+0.3
4,960,891	+				+1.3
4,960,892	-				-0.3
4,960,892	-				-2.5
4,960,969	-				-0.9
4,960,974	-				-1.5
4,961,093	-				+0.3
4,961,134	+				+0.2
4,961,135	-				+0.6
4,961,135	-				-3.0
4,961,148	+				-0.7
4,961,208	+				-2.8
4,961,208	+				-0.3
4,961,209	-				+1.1
4,961,209	-				-0.3
4,961,209	-				-2.0
4,961,209	-				-1.5
4,961,217	-				+0.2
4,961,217	-				-0.3
4,961,217	-				+0.7
4,961,219	+				-1.5
4,961,219	+				-0.9
4,961,242	+				-0.4
4,961,243	-				-2.8
4,961,243	-				-0.3
4,961,272	-		AO353_22655	0.12	-3.7
4,961,279	-		AO353_22655	0.13	-0.3
4,961,288	+		AO353_22655	0.14	+0.3
4,961,568	+		AO353_22655	0.56	-0.4
4,961,568	+		AO353_22655	0.56	-1.9
4,961,568	+		AO353_22655	0.56	-1.4
4,961,569	-		AO353_22655	0.56	-0.5
4,961,569	-		AO353_22655	0.56	+1.3
4,961,768	+		AO353_22655	0.86	-1.2
4,961,768	+		AO353_22655	0.86	-1.6
4,961,768	+		AO353_22655	0.86	-1.7
4,961,768	+		AO353_22655	0.86	-0.7
4,961,769	-		AO353_22655	0.86	+0.4
4,961,769	-		AO353_22655	0.86	-0.5
4,961,772	+		AO353_22655	0.86	-2.0
4,961,772	+		AO353_22655	0.86	+0.3
4,961,772	+		AO353_22655	0.86	-1.2
4,961,772	+		AO353_22655	0.86	-1.3
4,961,772	+		AO353_22655	0.86	-1.0
4,961,772	+		AO353_22655	0.86	-1.7
4,961,772	+		AO353_22655	0.86	+0.1
4,961,772	+		AO353_22655	0.86	-1.9
4,961,772	+		AO353_22655	0.86	-1.3
4,961,772	+		AO353_22655	0.86	-2.3
4,961,772	+		AO353_22655	0.86	+0.0
4,961,773	-		AO353_22655	0.86	+0.3
4,961,796	+		AO353_22655	0.90	-2.2
4,961,796	+		AO353_22655	0.90	-2.0
4,961,796	+		AO353_22655	0.90	-1.2
4,961,796	+		AO353_22655	0.90	-2.2
4,961,796	+		AO353_22655	0.90	-2.0
4,961,796	+		AO353_22655	0.90	-1.3
4,961,796	+		AO353_22655	0.90	-1.3
4,961,796	+		AO353_22655	0.90	-1.9
4,961,797	-				-2.2
4,961,797	-				+0.7
4,961,797	-				-1.0
4,961,800	+				-0.7
4,961,800	+				-2.0
4,961,801	-				-0.1
4,961,801	-				+0.7
4,961,809	-				+0.4
4,961,809	-				-1.3
4,961,979	-		AO353_22660	0.15	+1.3
4,962,012	+		AO353_22660	0.25	+0.3
4,962,012	+		AO353_22660	0.25	-1.3
4,962,013	-		AO353_22660	0.25	-0.4
4,962,023	-		AO353_22660	0.28	+0.9
4,962,023	-		AO353_22660	0.28	-1.2
4,962,086	+		AO353_22660	0.48	+1.3
4,962,086	+		AO353_22660	0.48	+1.3
4,962,086	+		AO353_22660	0.48	+1.0
4,962,086	+		AO353_22660	0.48	+1.3
4,962,086	+		AO353_22660	0.48	-0.3
4,962,086	+		AO353_22660	0.48	+0.3
4,962,086	+		AO353_22660	0.48	+0.3
4,962,086	+		AO353_22660	0.48	+0.3
4,962,087	-		AO353_22660	0.48	+0.5
4,962,087	-		AO353_22660	0.48	+1.4
4,962,087	-		AO353_22660	0.48	+0.7
4,962,087	-		AO353_22660	0.48	-1.3
4,962,087	-		AO353_22660	0.48	-1.0
4,962,087	-		AO353_22660	0.48	-2.5
4,962,087	-				+1.3
4,962,104	+		AO353_22660	0.53	+1.1
4,962,119	+		AO353_22660	0.58	-1.6
4,962,120	-		AO353_22660	0.58	+0.2
4,962,144	-		AO353_22660	0.65	-0.0
4,962,144	-		AO353_22660	0.65	-0.3
4,962,170	-		AO353_22660	0.73	+0.8
4,962,291	+				+1.3
4,962,292	-				+0.1
4,962,370	-		AO353_22665	0.12	-0.2
4,962,383	+		AO353_22665	0.15	-2.0
4,962,383	+		AO353_22665	0.15	-1.2
4,962,383	+		AO353_22665	0.15	+0.4
4,962,383	+		AO353_22665	0.15	-0.7
4,962,384	-		AO353_22665	0.16	-0.3
4,962,384	-		AO353_22665	0.16	+0.5
4,962,384	-		AO353_22665	0.16	-1.3
4,962,546	+		AO353_22665	0.53	-0.1
4,962,602	+		AO353_22665	0.65	+0.3
4,962,602	+		AO353_22665	0.65	+0.0
4,962,602	+		AO353_22665	0.65	+0.9
4,962,603	-		AO353_22665	0.66	+0.4
4,962,603	-		AO353_22665	0.66	+0.7
4,962,753	+				-0.7
4,962,753	+				+0.3
4,962,753	+				+0.3
4,962,753	+				-0.4
4,962,753	+				+2.9
4,962,753	+				-0.6
4,962,754	-				+0.3
4,962,754	-				-1.0
4,962,754	-				+1.3
4,962,754	-				+0.3
4,962,754	-				-0.0
4,962,775	-				-1.6
4,962,775	-				-0.2
4,962,793	-				-1.2
4,962,857	+				-1.7
4,962,857	+				-0.4
4,962,857	+				+0.4
4,962,858	-				+0.6
4,962,858	-				-1.5