Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_19035

Experiment: Spectinomycin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.2 mg/ml
4,179,569	+		AO353_19030	0.32	-3.7
4,179,569	+		AO353_19030	0.32	-1.3
4,179,570	-		AO353_19030	0.32	+2.4
4,179,570	-		AO353_19030	0.32	+2.4
4,179,570	-		AO353_19030	0.32	-1.7
4,179,570	-		AO353_19030	0.32	-0.9
4,179,570	-		AO353_19030	0.32	-0.9
4,179,611	+		AO353_19030	0.36	+0.6
4,179,839	+		AO353_19030	0.57	+0.7
4,179,840	-				+1.2
4,179,840	-		AO353_19030	0.58	+0.5
4,179,840	-		AO353_19030	0.58	-0.5
4,179,960	-		AO353_19030	0.69	-0.3
4,179,996	+		AO353_19030	0.72	-1.0
4,179,996	+		AO353_19030	0.72	-0.9
4,179,996	+		AO353_19030	0.72	-0.4
4,179,997	-		AO353_19030	0.72	+0.7
4,179,997	-		AO353_19030	0.72	-1.0
4,179,997	-		AO353_19030	0.72	-2.4
4,179,997	-		AO353_19030	0.72	-1.3
4,180,013	+		AO353_19030	0.74	-0.8
4,180,014	-		AO353_19030	0.74	-1.0
4,180,014	-		AO353_19030	0.74	-0.2
4,180,031	+		AO353_19030	0.75	-0.4
4,180,031	+		AO353_19030	0.75	-3.1
4,180,031	+		AO353_19030	0.75	-1.8
4,180,031	+		AO353_19030	0.75	+0.2
4,180,031	+		AO353_19030	0.75	-1.4
4,180,031	+		AO353_19030	0.75	+0.6
4,180,031	+		AO353_19030	0.75	-1.3
4,180,032	-		AO353_19030	0.75	+1.2
4,180,061	-		AO353_19030	0.78	-0.3
4,180,061	-		AO353_19030	0.78	-0.9
4,180,079	+		AO353_19030	0.80	-1.5
4,180,079	+		AO353_19030	0.80	+0.8
4,180,079	+		AO353_19030	0.80	-1.1
4,180,079	+		AO353_19030	0.80	-0.7
4,180,079	+		AO353_19030	0.80	-3.1
4,180,218	+				-1.4
4,180,270	+				-2.1
4,180,271	-				-0.0
4,180,286	-				+1.8
4,180,286	-				-1.0
4,180,302	+				-0.3
4,180,303	-				-0.8
4,180,303	-				-2.0
4,180,303	-				+0.6
4,180,303	-				-1.0
4,180,303	-				+0.7
4,180,303	-				-0.2
4,180,364	+				+0.3
4,180,364	+				+0.4
4,180,365	-				-0.8
4,180,365	-				-0.8
4,180,365	-				-2.1
4,180,365	-				+0.2
4,180,365	-				-1.4
4,180,430	+				-1.4
4,180,442	-				-1.4
4,180,477	+				-1.3
4,180,478	-				-0.4
4,180,601	+		AO353_19035	0.37	-0.3
4,180,601	+		AO353_19035	0.37	-1.1
4,180,601	+		AO353_19035	0.37	+0.4
4,180,602	-		AO353_19035	0.38	+0.1
4,180,602	-		AO353_19035	0.38	+0.1
4,180,602	-		AO353_19035	0.38	-0.4
4,180,643	-		AO353_19035	0.47	-0.0
4,180,675	+		AO353_19035	0.54	-0.6
4,180,676	-		AO353_19035	0.55	-0.0
4,180,676	-		AO353_19035	0.55	+2.0
4,180,684	+		AO353_19035	0.56	-0.1
4,180,684	+		AO353_19035	0.56	+0.3
4,180,684	+		AO353_19035	0.56	-0.3
4,180,685	-		AO353_19035	0.57	-3.0
4,180,685	-		AO353_19035	0.57	-2.8
4,180,753	+				-1.3
4,180,753	+		AO353_19035	0.72	-0.9
4,180,754	-		AO353_19035	0.73	-0.3
4,180,754	-		AO353_19035	0.73	-1.8
4,180,754	-		AO353_19035	0.73	+0.2
4,180,781	+		AO353_19035	0.79	-0.4
4,180,781	+		AO353_19035	0.79	+0.8
4,180,781	+		AO353_19035	0.79	+0.0
4,180,782	-		AO353_19035	0.79	-0.7
4,180,782	-		AO353_19035	0.79	+0.3
4,180,782	-		AO353_19035	0.79	-0.4
4,180,805	+		AO353_19035	0.84	-0.8
4,180,806	-		AO353_19035	0.85	+1.0
4,180,806	-		AO353_19035	0.85	+0.4
4,180,806	-		AO353_19035	0.85	-0.3
4,180,827	+		AO353_19035	0.90	-1.1
4,180,828	-				-0.4
4,180,828	-				-1.4
4,180,828	-				+0.6
4,180,859	+				+1.0
4,180,859	+				-1.1
4,180,859	+				-1.4
4,180,859	+				+0.6
4,180,859	+				-0.8
4,180,860	-				-0.9
4,180,860	-				-0.3
4,180,860	-				-1.0
4,180,860	-				-2.4
4,180,860	-				+0.4
4,180,918	-		AO353_19040	0.12	+2.1
4,180,919	+		AO353_19040	0.13	-0.5
4,180,919	+		AO353_19040	0.13	-0.0
4,180,919	+		AO353_19040	0.13	+0.9
4,180,919	+		AO353_19040	0.13	+1.1
4,180,919	+		AO353_19040	0.13	+1.1
4,180,919	+		AO353_19040	0.13	-0.9
4,180,919	+		AO353_19040	0.13	-0.6
4,180,919	+		AO353_19040	0.13	-0.5
4,180,919	+		AO353_19040	0.13	+1.1
4,180,919	+		AO353_19040	0.13	-0.4
4,180,919	+		AO353_19040	0.13	+0.5
4,180,919	+		AO353_19040	0.13	-0.8
4,180,919	+		AO353_19040	0.13	-1.8
4,180,919	+		AO353_19040	0.13	-1.5
4,180,919	+		AO353_19040	0.13	+0.8
4,180,919	+		AO353_19040	0.13	-0.8
4,180,919	+		AO353_19040	0.13	-0.7
4,180,919	+		AO353_19040	0.13	+0.3
4,180,919	+		AO353_19040	0.13	+0.5
4,180,919	+		AO353_19040	0.13	+1.7
4,180,919	+		AO353_19040	0.13	+1.3
4,180,920	-		AO353_19040	0.13	+0.3
4,180,920	-		AO353_19040	0.13	-2.0
4,180,920	-		AO353_19040	0.13	+1.1
4,180,920	-		AO353_19040	0.13	-1.1
4,180,920	-		AO353_19040	0.13	-1.9
4,180,920	-				+0.5
4,180,920	-		AO353_19040	0.13	+0.1
4,180,920	-		AO353_19040	0.13	-0.5
4,180,920	-		AO353_19040	0.13	+0.4
4,180,920	-		AO353_19040	0.13	-0.9
4,180,920	-		AO353_19040	0.13	-0.0
4,180,920	-		AO353_19040	0.13	+0.8
4,180,920	-		AO353_19040	0.13	-1.8
4,180,920	-		AO353_19040	0.13	-0.8
4,180,920	-		AO353_19040	0.13	-0.7
4,180,920	-		AO353_19040	0.13	+1.5
4,180,920	-		AO353_19040	0.13	-0.5
4,181,167	+		AO353_19040	0.77	-1.0
4,181,167	+		AO353_19040	0.77	-0.9
4,181,167	+		AO353_19040	0.77	-1.0
4,181,168	-		AO353_19040	0.77	+1.7
4,181,168	-		AO353_19040	0.77	+0.2
4,181,168	-		AO353_19040	0.77	+0.2
4,181,326	+				+1.8
4,181,326	+				+1.9
4,181,326	+				+1.0
4,181,327	-				-0.9
4,181,421	+		AO353_19045	0.17	+0.1
4,181,454	+		AO353_19045	0.21	+0.4
4,181,471	+		AO353_19045	0.23	-0.3
4,181,472	-		AO353_19045	0.23	-0.8
4,181,472	-		AO353_19045	0.23	-1.6
4,181,472	-		AO353_19045	0.23	-0.8
4,181,657	+		AO353_19045	0.42	-0.2
4,181,658	-		AO353_19045	0.42	-0.6
4,181,658	-		AO353_19045	0.42	+0.0
4,181,658	-		AO353_19045	0.42	+0.3