Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16805

Experiment: Spectinomycin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.2 mg/ml
3,720,629	+		AO353_16795	0.47	-0.0
3,720,629	+		AO353_16795	0.47	-0.5
3,720,629	+		AO353_16795	0.47	+0.7
3,720,630	-		AO353_16795	0.48	+0.4
3,720,630	-		AO353_16795	0.48	-0.8
3,720,630	-		AO353_16795	0.48	+2.5
3,720,630	-		AO353_16795	0.48	+1.0
3,720,630	-		AO353_16795	0.48	+0.9
3,720,792	+		AO353_16795	0.78	-2.0
3,720,792	+		AO353_16795	0.78	-0.3
3,720,793	-		AO353_16795	0.78	+0.2
3,720,793	-		AO353_16795	0.78	+1.7
3,720,887	+				-0.6
3,720,887	+				+0.2
3,720,887	+				-1.7
3,720,887	+				-0.7
3,720,888	-				+0.0
3,720,888	-				+0.3
3,720,888	-				-1.3
3,720,954	+				-1.6
3,720,954	+				+1.4
3,720,954	+				-0.3
3,720,955	-				+0.5
3,720,955	-				-0.2
3,720,955	-				-0.8
3,720,981	+				-2.6
3,720,982	-				+1.0
3,720,982	-				+1.1
3,720,982	-				-0.6
3,721,025	-				-1.0
3,721,025	-				-0.9
3,721,143	+		AO353_16800	0.30	+0.0
3,721,143	+		AO353_16800	0.30	+1.8
3,721,143	+		AO353_16800	0.30	+2.6
3,721,143	+		AO353_16800	0.30	+0.2
3,721,144	-		AO353_16800	0.30	+1.4
3,721,144	-		AO353_16800	0.30	+0.2
3,721,144	-		AO353_16800	0.30	+0.8
3,721,152	+		AO353_16800	0.32	+1.5
3,721,152	+		AO353_16800	0.32	-0.9
3,721,153	-		AO353_16800	0.32	-1.6
3,721,153	-		AO353_16800	0.32	+0.1
3,721,153	-		AO353_16800	0.32	-1.6
3,721,153	-		AO353_16800	0.32	-0.2
3,721,153	-		AO353_16800	0.32	-0.4
3,721,246	+		AO353_16800	0.50	-0.8
3,721,246	+		AO353_16800	0.50	-0.6
3,721,246	+		AO353_16800	0.50	+0.9
3,721,246	+		AO353_16800	0.50	+1.1
3,721,246	+		AO353_16800	0.50	-0.1
3,721,246	+		AO353_16800	0.50	+0.1
3,721,246	+		AO353_16800	0.50	-0.8
3,721,246	+		AO353_16800	0.50	-0.5
3,721,247	-		AO353_16800	0.51	-0.0
3,721,247	-		AO353_16800	0.51	+1.6
3,721,247	-		AO353_16800	0.51	+0.9
3,721,247	-		AO353_16800	0.51	+1.3
3,721,247	-		AO353_16800	0.51	-1.0
3,721,247	-		AO353_16800	0.51	+0.3
3,721,247	-		AO353_16800	0.51	+0.3
3,721,247	-		AO353_16800	0.51	+0.1
3,721,247	-		AO353_16800	0.51	-1.0
3,721,247	-		AO353_16800	0.51	+1.1
3,721,320	-		AO353_16800	0.65	+0.5
3,721,320	-		AO353_16800	0.65	+1.6
3,721,320	-		AO353_16800	0.65	-1.4
3,721,377	+		AO353_16800	0.77	+0.4
3,721,377	+		AO353_16800	0.77	+1.8
3,721,378	-		AO353_16800	0.77	+1.0
3,721,461	+				+0.8
3,721,461	+				-1.5
3,721,461	+				-0.0
3,721,461	+				+0.5
3,721,461	+				+0.4
3,721,461	+				-0.1
3,721,462	-				-0.8
3,721,462	-				-1.0
3,721,462	-				-1.1
3,721,462	-				-0.5
3,721,463	+				+1.8
3,721,463	+				+0.4
3,721,463	+				+0.4
3,721,464	-				-0.2
3,721,464	-				+0.8
3,721,464	-				-0.0
3,721,530	+				+1.3
3,721,555	+				+1.6
3,721,562	+				-1.4
3,721,562	+				+0.8
3,721,562	+				-1.5
3,721,562	+				-2.1
3,721,575	+				-1.4
3,721,658	-				-2.3
3,721,658	-				-0.8
3,721,767	-		AO353_16805	0.18	+1.0
3,721,880	+		AO353_16805	0.29	-0.2
3,721,880	+		AO353_16805	0.29	-0.2
3,721,880	+		AO353_16805	0.29	+0.2
3,721,880	+		AO353_16805	0.29	-0.1
3,721,881	-		AO353_16805	0.29	-0.8
3,721,881	-		AO353_16805	0.29	-1.0
3,721,881	-		AO353_16805	0.29	-0.6
3,721,881	-		AO353_16805	0.29	-1.4
3,722,102	-		AO353_16805	0.50	-1.0
3,722,225	+		AO353_16805	0.62	-0.2
3,722,226	-		AO353_16805	0.62	-1.9
3,722,226	-		AO353_16805	0.62	-0.6
3,722,379	-		AO353_16805	0.76	-1.4
3,722,379	-		AO353_16805	0.76	-1.4
3,722,444	+		AO353_16805	0.82	+0.9
3,722,444	+		AO353_16805	0.82	-2.3
3,722,444	+		AO353_16805	0.82	+0.2
3,722,444	+		AO353_16805	0.82	-1.0
3,722,444	+		AO353_16805	0.82	-2.1
3,722,445	-		AO353_16805	0.82	-0.6
3,722,445	-		AO353_16805	0.82	-0.2
3,722,445	-		AO353_16805	0.82	+0.1
3,722,445	-		AO353_16805	0.82	-1.6
3,722,450	+		AO353_16805	0.83	-1.2
3,722,450	+		AO353_16805	0.83	-0.8
3,722,450	+		AO353_16805	0.83	+0.4
3,722,450	+		AO353_16805	0.83	+0.1
3,722,451	-				+2.8
3,722,451	-		AO353_16805	0.83	-1.7
3,722,623	+				+0.8
3,722,623	+				+1.0
3,722,623	+				-0.4
3,722,624	-				-0.1
3,722,648	+				-0.7
3,722,730	+		AO353_16810	0.20	+0.0
3,722,730	+		AO353_16810	0.20	-0.9
3,722,730	+		AO353_16810	0.20	+1.1
3,722,769	+		AO353_16810	0.28	-0.1
3,722,996	+		AO353_16810	0.76	+0.9
3,722,996	+		AO353_16810	0.76	-0.8
3,722,996	+		AO353_16810	0.76	-1.4
3,723,052	+		AO353_16810	0.88	-0.1
3,723,122	-				-1.0
3,723,130	-				+1.3
3,723,130	-				-1.6
3,723,130	-				-0.6
3,723,130	-				+0.4
3,723,130	-				-0.7
3,723,153	+				+1.4
3,723,153	+				-0.7
3,723,153	+				-2.9
3,723,153	+				-1.8
3,723,154	-				-0.6
3,723,154	-				+1.9
3,723,154	-				+0.2
3,723,230	+				-0.8
3,723,230	+				+1.4
3,723,230	+				-0.6
3,723,230	+				+0.3
3,723,230	+				+1.3
3,723,231	-				+0.3
3,723,332	+		AO353_16815	0.16	-0.0
3,723,332	+		AO353_16815	0.16	-1.1
3,723,332	+		AO353_16815	0.16	+0.2
3,723,332	+		AO353_16815	0.16	-0.2
3,723,332	+		AO353_16815	0.16	+1.1
3,723,332	+		AO353_16815	0.16	-0.2
3,723,332	+		AO353_16815	0.16	-0.6
3,723,332	+		AO353_16815	0.16	-0.5
3,723,332	+		AO353_16815	0.16	-1.6
3,723,332	+		AO353_16815	0.16	+1.8
3,723,333	-		AO353_16815	0.16	+0.4
3,723,333	-		AO353_16815	0.16	-1.2
3,723,333	-		AO353_16815	0.16	-1.0
3,723,333	-		AO353_16815	0.16	+0.6
3,723,333	-		AO353_16815	0.16	-1.4
3,723,333	-		AO353_16815	0.16	-0.6
3,723,333	-		AO353_16815	0.16	+0.6
3,723,333	-		AO353_16815	0.16	+1.4
3,723,333	-		AO353_16815	0.16	-0.7
3,723,333	-		AO353_16815	0.16	+0.6
3,723,333	-		AO353_16815	0.16	-0.7
3,723,333	-		AO353_16815	0.16	-1.2
3,723,333	-		AO353_16815	0.16	-2.6
3,723,333	-		AO353_16815	0.16	-0.3
3,723,333	-		AO353_16815	0.16	+0.3
3,723,336	+		AO353_16815	0.17	+1.1
3,723,336	+		AO353_16815	0.17	+0.6
3,723,336	+		AO353_16815	0.17	+0.5
3,723,336	+		AO353_16815	0.17	+0.5
3,723,336	+		AO353_16815	0.17	+0.9
3,723,336	+		AO353_16815	0.17	+1.6
3,723,336	+		AO353_16815	0.17	-1.6
3,723,336	+		AO353_16815	0.17	+0.9
3,723,336	+		AO353_16815	0.17	+1.2
3,723,336	+		AO353_16815	0.17	+1.4
3,723,336	+		AO353_16815	0.17	+0.1
3,723,337	-		AO353_16815	0.17	+1.5
3,723,337	-		AO353_16815	0.17	+1.1
3,723,337	-		AO353_16815	0.17	+0.4
3,723,337	-		AO353_16815	0.17	+1.0
3,723,337	-		AO353_16815	0.17	-0.0
3,723,337	-		AO353_16815	0.17	-0.4
3,723,337	-		AO353_16815	0.17	-0.9
3,723,337	-		AO353_16815	0.17	+0.7
3,723,337	-		AO353_16815	0.17	+0.2
3,723,337	-		AO353_16815	0.17	+0.7
3,723,337	-		AO353_16815	0.17	-0.5
3,723,337	-		AO353_16815	0.17	-2.8
3,723,337	-		AO353_16815	0.17	+1.3
3,723,337	-		AO353_16815	0.17	+0.5
3,723,337	-		AO353_16815	0.17	-0.4
3,723,337	-		AO353_16815	0.17	-0.5
3,723,337	-		AO353_16815	0.17	+1.5
3,723,337	-		AO353_16815	0.17	-0.1
3,723,337	-		AO353_16815	0.17	+0.4
3,723,337	-		AO353_16815	0.17	-1.7
3,723,337	-		AO353_16815	0.17	+0.8
3,723,337	-		AO353_16815	0.17	+1.3
3,723,337	-		AO353_16815	0.17	-1.6
3,723,385	+		AO353_16815	0.21	+0.5
3,723,385	+		AO353_16815	0.21	-1.4
3,723,385	+		AO353_16815	0.21	+0.4
3,723,385	+		AO353_16815	0.21	-0.1
3,723,385	+		AO353_16815	0.21	-0.7
3,723,385	+		AO353_16815	0.21	+0.8
3,723,385	+		AO353_16815	0.21	-0.3
3,723,385	+		AO353_16815	0.21	-0.7
3,723,385	+		AO353_16815	0.21	+1.2
3,723,385	+		AO353_16815	0.21	-1.7
3,723,385	+		AO353_16815	0.21	+0.8
3,723,385	+		AO353_16815	0.21	-0.2
3,723,385	+		AO353_16815	0.21	+0.6
3,723,385	+		AO353_16815	0.21	+0.1
3,723,386	-		AO353_16815	0.21	-1.3
3,723,386	-		AO353_16815	0.21	+0.1
3,723,386	-		AO353_16815	0.21	-1.2
3,723,386	-		AO353_16815	0.21	-0.2
3,723,386	-		AO353_16815	0.21	-0.4
3,723,386	-		AO353_16815	0.21	+0.2
3,723,386	-		AO353_16815	0.21	-0.5
3,723,386	-		AO353_16815	0.21	-0.2
3,723,386	-		AO353_16815	0.21	-1.4
3,723,386	-		AO353_16815	0.21	+0.0
3,723,386	-		AO353_16815	0.21	+0.6
3,723,386	-		AO353_16815	0.21	-0.6
3,723,386	-		AO353_16815	0.21	+0.3
3,723,386	-		AO353_16815	0.21	-0.7
3,723,386	-		AO353_16815	0.21	-0.7
3,723,386	-		AO353_16815	0.21	+1.0
3,723,386	-		AO353_16815	0.21	+0.3
3,723,386	-		AO353_16815	0.21	+0.8
3,723,386	-		AO353_16815	0.21	-1.2
3,723,387	+		AO353_16815	0.21	-0.5
3,723,387	+		AO353_16815	0.21	-1.8
3,723,387	+		AO353_16815	0.21	-0.4
3,723,387	+		AO353_16815	0.21	-1.0
3,723,388	-		AO353_16815	0.21	+1.8
3,723,388	-		AO353_16815	0.21	-1.4
3,723,388	-		AO353_16815	0.21	+1.3
3,723,388	-		AO353_16815	0.21	-1.0
3,723,388	-		AO353_16815	0.21	+0.9
3,723,388	-		AO353_16815	0.21	+1.3
3,723,473	+		AO353_16815	0.29	-1.2
3,723,473	+		AO353_16815	0.29	+1.3
3,723,473	+		AO353_16815	0.29	+0.9
3,723,474	-		AO353_16815	0.29	+1.4
3,723,474	-		AO353_16815	0.29	+0.5
3,723,474	-		AO353_16815	0.29	+1.0
3,723,474	-		AO353_16815	0.29	-1.1
3,723,474	-		AO353_16815	0.29	-1.9
3,723,474	-		AO353_16815	0.29	+0.1
3,723,512	+		AO353_16815	0.32	+1.5
3,723,512	+		AO353_16815	0.32	-1.0
3,723,512	+		AO353_16815	0.32	-0.5
3,723,513	-		AO353_16815	0.33	-1.4
3,723,513	-		AO353_16815	0.33	+0.1
3,723,513	-		AO353_16815	0.33	+1.4
3,723,513	-		AO353_16815	0.33	-0.4
3,723,551	+		AO353_16815	0.36	-0.4
3,723,551	+		AO353_16815	0.36	+0.6
3,723,551	+		AO353_16815	0.36	-0.0
3,723,551	+		AO353_16815	0.36	+2.2
3,723,551	+		AO353_16815	0.36	+0.6
3,723,552	-		AO353_16815	0.36	+1.1
3,723,552	-		AO353_16815	0.36	-0.4
3,723,552	-		AO353_16815	0.36	+0.2
3,723,552	-		AO353_16815	0.36	-1.0
3,723,552	-		AO353_16815	0.36	+0.0
3,723,552	-		AO353_16815	0.36	-1.2
3,723,552	-		AO353_16815	0.36	+0.4
3,723,552	-		AO353_16815	0.36	-1.8
3,723,552	-		AO353_16815	0.36	-0.5
3,723,552	-		AO353_16815	0.36	-0.2
3,723,552	-		AO353_16815	0.36	-0.6
3,723,552	-		AO353_16815	0.36	+1.8
3,723,552	-		AO353_16815	0.36	+1.0
3,723,552	-		AO353_16815	0.36	-0.7
3,723,552	-		AO353_16815	0.36	+0.9
3,723,552	-		AO353_16815	0.36	+0.7
3,723,552	-		AO353_16815	0.36	+1.2