Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15270

Experiment: Spectinomycin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.2 mg/ml
3,372,871	+		AO353_15260	0.35	-0.5
3,372,871	+		AO353_15260	0.35	-1.3
3,372,954	+		AO353_15260	0.49	+0.1
3,373,128	-		AO353_15260	0.77	-1.6
3,373,137	-		AO353_15260	0.78	-0.0
3,373,137	-		AO353_15260	0.78	-2.1
3,373,198	+		AO353_15260	0.88	-0.5
3,373,198	+		AO353_15260	0.88	+0.4
3,373,198	+		AO353_15260	0.88	-2.2
3,373,198	+		AO353_15260	0.88	+0.9
3,373,198	+		AO353_15260	0.88	+1.4
3,373,198	+		AO353_15260	0.88	-0.5
3,373,198	+		AO353_15260	0.88	-0.1
3,373,198	+		AO353_15260	0.88	+0.3
3,373,198	+		AO353_15260	0.88	+0.1
3,373,198	+		AO353_15260	0.88	-0.2
3,373,198	+		AO353_15260	0.88	-2.5
3,373,198	+		AO353_15260	0.88	-0.9
3,373,199	-		AO353_15260	0.89	+0.3
3,373,199	-		AO353_15260	0.89	-1.1
3,373,199	-		AO353_15260	0.89	-0.5
3,373,199	-		AO353_15260	0.89	-1.9
3,373,199	-		AO353_15260	0.89	-1.8
3,373,199	-		AO353_15260	0.89	-1.1
3,373,199	-		AO353_15260	0.89	-1.8
3,373,274	+				-0.5
3,373,304	+				+0.0
3,373,304	+				+0.9
3,373,304	+				+1.1
3,373,304	+				-3.6
3,373,304	+				-1.0
3,373,304	+				-1.1
3,373,304	+				-1.5
3,373,305	-				-1.3
3,373,305	-				-1.3
3,373,305	-				+0.2
3,373,305	-				-0.4
3,373,305	-				-0.5
3,373,305	-				-0.6
3,373,305	-				+0.9
3,373,305	-				-1.3
3,373,322	+				-1.5
3,373,322	+				-0.1
3,373,322	+				-0.4
3,373,322	+				-0.9
3,373,322	+				-0.1
3,373,322	+				+1.3
3,373,323	-				+0.1
3,373,323	-				-1.2
3,373,323	-				-0.3
3,373,434	+		AO353_15265	0.36	+0.3
3,373,434	+		AO353_15265	0.36	+0.6
3,373,434	+		AO353_15265	0.36	-0.9
3,373,435	-		AO353_15265	0.36	-2.5
3,373,435	-		AO353_15265	0.36	+2.8
3,373,513	+		AO353_15265	0.55	-1.6
3,373,514	-		AO353_15265	0.55	+0.0
3,373,514	-		AO353_15265	0.55	-0.8
3,373,520	+		AO353_15265	0.57	-1.9
3,373,520	+		AO353_15265	0.57	-0.3
3,373,520	+		AO353_15265	0.57	-1.4
3,373,520	+		AO353_15265	0.57	+0.6
3,373,520	+		AO353_15265	0.57	+0.1
3,373,520	+		AO353_15265	0.57	+0.7
3,373,520	+		AO353_15265	0.57	-0.1
3,373,521	-		AO353_15265	0.57	-2.8
3,373,521	-		AO353_15265	0.57	-2.1
3,373,551	-		AO353_15265	0.64	+0.7
3,373,551	-		AO353_15265	0.64	+1.1
3,373,551	-		AO353_15265	0.64	-0.8
3,373,689	+				+0.4
3,373,690	-				+1.2
3,373,697	+				+1.3
3,373,698	-				+0.9
3,373,698	-				-1.3
3,373,698	-				-1.0
3,373,700	+				+1.6
3,373,700	+				-0.3
3,373,701	-				-0.4
3,373,701	-				-0.9
3,373,701	-				-1.0
3,373,748	+				-2.6
3,373,748	+				+0.3
3,373,748	+				-1.9
3,373,748	+				-0.3
3,373,748	+				+0.1
3,373,749	-				-0.4
3,373,749	-				+0.7
3,373,749	-				-0.1
3,373,757	-				-0.5
3,373,837	-				+1.0
3,373,848	+				-1.0
3,373,848	+				+0.5
3,373,849	-				-0.5
3,373,849	-				+1.6
3,373,849	-				-0.1
3,373,849	-				-0.5
3,373,874	+				-1.1
3,373,874	+				-2.8
3,373,875	-				-0.3
3,373,875	-				-1.5
3,373,944	+		AO353_15270	0.18	-0.2
3,373,944	+		AO353_15270	0.18	-1.8
3,373,944	+		AO353_15270	0.18	-1.1
3,373,945	-		AO353_15270	0.18	-1.4
3,373,945	-		AO353_15270	0.18	+0.3
3,373,945	-		AO353_15270	0.18	-2.8
3,373,945	-		AO353_15270	0.18	-2.0
3,373,945	-		AO353_15270	0.18	-0.7
3,373,945	-		AO353_15270	0.18	-0.4
3,373,951	+		AO353_15270	0.20	-0.8
3,374,219	-		AO353_15270	0.66	-0.0
3,374,378	+				-0.1
3,374,378	+				-0.8
3,374,379	-				+0.4
3,374,379	-				+0.3
3,374,379	-				+1.7
3,374,379	-				+0.4
3,374,379	-				-0.5
3,374,813	-		AO353_15275	0.67	+0.1
3,374,874	+		AO353_15275	0.78	-1.1
3,375,019	-				-1.6
3,375,019	-				+1.0
3,375,019	-				-1.8
3,375,019	-				-1.9
3,375,019	-				-1.7
3,375,019	-				-0.2
3,375,019	-				+0.3
3,375,019	-				-0.0
3,375,019	-				-0.6
3,375,019	-				+0.5
3,375,019	-				-0.5
3,375,019	-				-0.6
3,375,019	-				+0.8
3,375,023	-				+0.3
3,375,023	-				-0.5
3,375,023	-				-1.3
3,375,023	-				+0.2
3,375,023	-				-2.2
3,375,160	-				-0.7
3,375,160	-				-0.4
3,375,221	-		AO353_15280	0.25	-2.5
3,375,221	-		AO353_15280	0.25	+0.2
3,375,319	-		AO353_15280	0.56	-0.7
3,375,319	-		AO353_15280	0.56	-0.5
3,375,319	-		AO353_15280	0.56	+0.9
3,375,319	-		AO353_15280	0.56	-1.9
3,375,319	-		AO353_15280	0.56	-0.6
3,375,321	+		AO353_15280	0.57	+1.0
3,375,322	-		AO353_15280	0.57	-1.6
3,375,322	-		AO353_15280	0.57	+0.1
3,375,322	-		AO353_15280	0.57	+0.0
3,375,322	-		AO353_15280	0.57	+1.0
3,375,322	-		AO353_15280	0.57	-0.7
3,375,322	-		AO353_15280	0.57	+0.5
3,375,322	-		AO353_15280	0.57	+1.1
3,375,322	-		AO353_15280	0.57	+0.9
3,375,322	-		AO353_15280	0.57	-0.6
3,375,327	-		AO353_15280	0.58	-0.4
3,375,365	+		AO353_15280	0.70	-1.2
3,375,366	-		AO353_15280	0.71	+1.9