Experiment: Spectinomycin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14940 and AO353_14945 are separated by 751 nucleotides AO353_14945 and AO353_14950 are separated by 182 nucleotides
AO353_14940: AO353_14940 - malate:quinone oxidoreductase, at 3,303,018 to 3,304,526
_14940
AO353_14945: AO353_14945 - hypothetical protein, at 3,305,278 to 3,305,502
_14945
AO353_14950: AO353_14950 - hypothetical protein, at 3,305,685 to 3,306,269
_14950
Position (kb)
3305
3306 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3304.459 kb on - strand at 3304.459 kb on - strand at 3304.497 kb on + strand at 3304.498 kb on - strand at 3304.500 kb on + strand at 3304.500 kb on + strand at 3304.500 kb on + strand at 3304.567 kb on + strand at 3304.568 kb on - strand at 3304.568 kb on - strand at 3304.598 kb on - strand at 3304.672 kb on - strand at 3304.672 kb on - strand at 3304.675 kb on + strand at 3304.675 kb on + strand at 3304.693 kb on + strand at 3304.693 kb on + strand at 3304.693 kb on + strand at 3304.693 kb on + strand at 3304.693 kb on + strand at 3304.694 kb on - strand at 3304.694 kb on - strand at 3304.694 kb on - strand at 3304.694 kb on - strand at 3304.730 kb on + strand at 3304.730 kb on + strand at 3304.730 kb on + strand at 3304.731 kb on - strand at 3304.731 kb on - strand at 3304.731 kb on - strand at 3304.731 kb on - strand at 3304.731 kb on - strand at 3304.740 kb on - strand at 3304.740 kb on - strand at 3304.740 kb on - strand at 3304.740 kb on - strand at 3304.801 kb on - strand at 3304.801 kb on - strand at 3304.828 kb on + strand at 3304.829 kb on - strand at 3304.829 kb on - strand at 3304.829 kb on - strand at 3304.836 kb on - strand at 3304.845 kb on + strand at 3304.846 kb on - strand at 3304.846 kb on - strand at 3304.846 kb on - strand at 3304.861 kb on + strand at 3304.992 kb on - strand at 3305.149 kb on + strand at 3305.149 kb on + strand at 3305.149 kb on + strand at 3305.150 kb on - strand at 3305.150 kb on - strand at 3305.150 kb on - strand at 3305.150 kb on - strand at 3305.150 kb on - strand at 3305.150 kb on - strand at 3305.150 kb on - strand at 3305.150 kb on - strand at 3305.195 kb on + strand at 3305.195 kb on + strand at 3305.195 kb on + strand at 3305.196 kb on - strand at 3305.196 kb on - strand at 3305.196 kb on - strand at 3305.197 kb on + strand at 3305.197 kb on + strand at 3305.197 kb on + strand at 3305.197 kb on + strand at 3305.198 kb on - strand at 3305.215 kb on - strand at 3305.246 kb on - strand at 3305.255 kb on + strand at 3305.256 kb on - strand at 3305.256 kb on - strand at 3305.256 kb on - strand at 3305.279 kb on + strand at 3305.456 kb on + strand, within AO353_14945 at 3305.462 kb on + strand, within AO353_14945 at 3305.462 kb on + strand, within AO353_14945 at 3305.463 kb on - strand, within AO353_14945 at 3305.463 kb on - strand, within AO353_14945 at 3305.537 kb on - strand at 3305.576 kb on - strand at 3305.591 kb on + strand at 3305.591 kb on + strand at 3305.591 kb on + strand at 3305.592 kb on - strand at 3305.592 kb on - strand at 3305.592 kb on - strand at 3305.592 kb on - strand at 3305.592 kb on - strand at 3305.592 kb on - strand at 3305.592 kb on - strand at 3305.592 kb on - strand at 3305.592 kb on - strand at 3305.643 kb on + strand at 3305.643 kb on + strand at 3305.644 kb on - strand at 3305.644 kb on - strand at 3305.645 kb on + strand at 3305.645 kb on + strand at 3305.645 kb on + strand at 3305.646 kb on - strand at 3305.646 kb on - strand at 3305.646 kb on - strand at 3305.646 kb on - strand at 3305.646 kb on - strand at 3305.662 kb on + strand at 3305.662 kb on + strand at 3305.662 kb on + strand at 3305.662 kb on + strand at 3305.662 kb on + strand at 3305.663 kb on - strand at 3305.663 kb on - strand at 3305.663 kb on - strand at 3305.663 kb on - strand at 3305.663 kb on - strand at 3305.668 kb on + strand at 3305.668 kb on + strand at 3305.669 kb on - strand at 3305.679 kb on + strand at 3305.680 kb on - strand at 3305.764 kb on + strand, within AO353_14950 at 3305.764 kb on + strand, within AO353_14950 at 3305.765 kb on - strand, within AO353_14950 at 3305.985 kb on - strand, within AO353_14950 at 3305.985 kb on - strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3306.033 kb on + strand, within AO353_14950 at 3306.033 kb on + strand, within AO353_14950 at 3306.033 kb on + strand, within AO353_14950 at 3306.033 kb on + strand, within AO353_14950 at 3306.033 kb on + strand, within AO353_14950 at 3306.033 kb on + strand, within AO353_14950 at 3306.034 kb on - strand, within AO353_14950 at 3306.034 kb on - strand, within AO353_14950 at 3306.034 kb on - strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.075 kb on - strand, within AO353_14950 at 3306.075 kb on - strand, within AO353_14950 at 3306.121 kb on - strand, within AO353_14950 at 3306.121 kb on - strand, within AO353_14950 at 3306.121 kb on - strand, within AO353_14950 at 3306.355 kb on - strand at 3306.396 kb on + strand at 3306.402 kb on + strand at 3306.402 kb on + strand at 3306.412 kb on + strand at 3306.412 kb on + strand at 3306.412 kb on + strand at 3306.412 kb on + strand at 3306.412 kb on + strand at 3306.413 kb on - strand at 3306.413 kb on - strand at 3306.413 kb on - strand at 3306.413 kb on - strand at 3306.413 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Spectinomycin 0.2 mg/ml remove 3,304,459 - -0.4 3,304,459 - -2.4 3,304,497 + -0.3 3,304,498 - +1.2 3,304,500 + +0.1 3,304,500 + +0.3 3,304,500 + -0.2 3,304,567 + +1.3 3,304,568 - +0.7 3,304,568 - -0.9 3,304,598 - -0.1 3,304,672 - -0.4 3,304,672 - -0.4 3,304,675 + +1.5 3,304,675 + -1.1 3,304,693 + +0.3 3,304,693 + -2.0 3,304,693 + +0.6 3,304,693 + -1.3 3,304,693 + -0.7 3,304,694 - +0.2 3,304,694 - -1.1 3,304,694 - -0.7 3,304,694 - -1.1 3,304,730 + -2.3 3,304,730 + -1.4 3,304,730 + +0.6 3,304,731 - -2.1 3,304,731 - +1.9 3,304,731 - -0.1 3,304,731 - +0.9 3,304,731 - +0.3 3,304,740 - +0.1 3,304,740 - -0.1 3,304,740 - -0.2 3,304,740 - -0.7 3,304,801 - +0.6 3,304,801 - -1.1 3,304,828 + -1.9 3,304,829 - -0.6 3,304,829 - +0.9 3,304,829 - -1.1 3,304,836 - +0.3 3,304,845 + -1.3 3,304,846 - -1.1 3,304,846 - +0.0 3,304,846 - +1.9 3,304,861 + -1.6 3,304,992 - +0.2 3,305,149 + +0.1 3,305,149 + -0.4 3,305,149 + -1.3 3,305,150 - -0.6 3,305,150 - -1.7 3,305,150 - -1.3 3,305,150 - +0.5 3,305,150 - +2.2 3,305,150 - -1.6 3,305,150 - -2.0 3,305,150 - +1.1 3,305,195 + -0.9 3,305,195 + +1.3 3,305,195 + +2.9 3,305,196 - +0.1 3,305,196 - +0.6 3,305,196 - +0.3 3,305,197 + +0.4 3,305,197 + -0.8 3,305,197 + -0.4 3,305,197 + +0.5 3,305,198 - -0.2 3,305,215 - -1.3 3,305,246 - +1.1 3,305,255 + +0.3 3,305,256 - -2.0 3,305,256 - +0.7 3,305,256 - -0.3 3,305,279 + -1.8 3,305,456 + AO353_14945 0.79 -0.9 3,305,462 + AO353_14945 0.82 -0.3 3,305,462 + AO353_14945 0.82 -1.3 3,305,463 - AO353_14945 0.82 -0.7 3,305,463 - AO353_14945 0.82 -1.1 3,305,537 - -0.7 3,305,576 - -0.8 3,305,591 + -0.7 3,305,591 + +1.6 3,305,591 + -2.0 3,305,592 - -1.4 3,305,592 - -2.2 3,305,592 - +0.3 3,305,592 - -0.3 3,305,592 - -0.1 3,305,592 - +0.6 3,305,592 - +0.1 3,305,592 - -1.9 3,305,592 - +0.0 3,305,643 + +0.3 3,305,643 + -1.1 3,305,644 - +0.0 3,305,644 - +0.8 3,305,645 + +0.1 3,305,645 + +0.0 3,305,645 + +0.3 3,305,646 - -0.9 3,305,646 - +0.7 3,305,646 - -2.8 3,305,646 - +0.6 3,305,646 - -0.1 3,305,662 + +0.5 3,305,662 + -0.8 3,305,662 + -0.6 3,305,662 + -0.1 3,305,662 + -0.2 3,305,663 - -0.5 3,305,663 - +0.9 3,305,663 - +0.6 3,305,663 - -0.7 3,305,663 - +1.7 3,305,668 + +0.6 3,305,668 + +1.2 3,305,669 - -1.9 3,305,679 + -1.2 3,305,680 - -1.4 3,305,764 + AO353_14950 0.14 -1.2 3,305,764 + AO353_14950 0.14 -1.3 3,305,765 - AO353_14950 0.14 +0.2 3,305,985 - AO353_14950 0.51 -0.8 3,305,985 - AO353_14950 0.51 -1.6 3,305,991 + AO353_14950 0.52 -1.3 3,305,991 + AO353_14950 0.52 -2.3 3,305,991 + AO353_14950 0.52 -1.9 3,305,991 + AO353_14950 0.52 -0.4 3,305,991 + AO353_14950 0.52 -1.1 3,305,991 + AO353_14950 0.52 -0.1 3,305,991 + AO353_14950 0.52 -2.4 3,305,991 + AO353_14950 0.52 +0.5 3,305,991 + AO353_14950 0.52 -0.9 3,305,991 + AO353_14950 0.52 +0.1 3,305,991 + AO353_14950 0.52 +0.9 3,305,991 + AO353_14950 0.52 -2.4 3,305,992 - AO353_14950 0.52 -0.3 3,305,992 - AO353_14950 0.52 +0.7 3,305,992 - AO353_14950 0.52 -1.8 3,305,992 - AO353_14950 0.52 -1.4 3,305,992 - AO353_14950 0.52 +1.1 3,305,992 - AO353_14950 0.52 +0.5 3,305,992 - AO353_14950 0.52 -1.6 3,305,992 - AO353_14950 0.52 -1.1 3,305,992 - AO353_14950 0.52 +0.1 3,305,992 - AO353_14950 0.52 +0.8 3,305,992 - AO353_14950 0.52 -0.3 3,305,992 - AO353_14950 0.52 -0.3 3,305,992 - AO353_14950 0.52 +0.4 3,305,992 - AO353_14950 0.52 -0.9 3,305,992 - AO353_14950 0.52 +1.1 3,305,992 - AO353_14950 0.52 +0.0 3,305,992 - AO353_14950 0.52 -0.4 3,305,992 - AO353_14950 0.52 +1.1 3,306,033 + AO353_14950 0.59 -0.7 3,306,033 + AO353_14950 0.59 -0.2 3,306,033 + AO353_14950 0.59 -0.2 3,306,033 + AO353_14950 0.59 -0.7 3,306,033 + AO353_14950 0.59 -0.4 3,306,033 + AO353_14950 0.59 +0.7 3,306,034 - AO353_14950 0.60 -1.1 3,306,034 - AO353_14950 0.60 -0.3 3,306,034 - AO353_14950 0.60 +0.3 3,306,057 + AO353_14950 0.64 +1.9 3,306,057 + AO353_14950 0.64 +0.8 3,306,057 + AO353_14950 0.64 +0.2 3,306,057 + AO353_14950 0.64 -1.4 3,306,057 + AO353_14950 0.64 +0.5 3,306,057 + AO353_14950 0.64 -0.9 3,306,057 + AO353_14950 0.64 +0.3 3,306,057 + AO353_14950 0.64 +0.4 3,306,057 + AO353_14950 0.64 -0.4 3,306,057 + AO353_14950 0.64 +0.7 3,306,057 + AO353_14950 0.64 -0.3 3,306,057 + AO353_14950 0.64 -0.3 3,306,057 + AO353_14950 0.64 -1.3 3,306,057 + AO353_14950 0.64 -2.8 3,306,057 + AO353_14950 0.64 -1.7 3,306,057 + AO353_14950 0.64 +0.0 3,306,057 + AO353_14950 0.64 +2.1 3,306,057 + AO353_14950 0.64 -1.4 3,306,057 + AO353_14950 0.64 -2.9 3,306,057 + AO353_14950 0.64 -0.5 3,306,057 + AO353_14950 0.64 +0.1 3,306,057 + AO353_14950 0.64 +0.6 3,306,057 + AO353_14950 0.64 +0.7 3,306,057 + AO353_14950 0.64 +0.3 3,306,057 + AO353_14950 0.64 -1.3 3,306,057 + AO353_14950 0.64 +1.3 3,306,057 + AO353_14950 0.64 -0.3 3,306,057 + AO353_14950 0.64 +0.8 3,306,057 + AO353_14950 0.64 +0.2 3,306,057 + AO353_14950 0.64 +0.9 3,306,057 + AO353_14950 0.64 -2.2 3,306,057 + AO353_14950 0.64 +0.8 3,306,057 + AO353_14950 0.64 +0.4 3,306,057 + AO353_14950 0.64 -2.2 3,306,057 + AO353_14950 0.64 -1.1 3,306,057 + AO353_14950 0.64 -0.4 3,306,057 + AO353_14950 0.64 -0.1 3,306,057 + AO353_14950 0.64 -1.4 3,306,057 + AO353_14950 0.64 -0.9 3,306,057 + AO353_14950 0.64 -0.7 3,306,057 + AO353_14950 0.64 +0.2 3,306,057 + AO353_14950 0.64 -1.3 3,306,058 - AO353_14950 0.64 +0.9 3,306,058 - AO353_14950 0.64 -1.4 3,306,058 - AO353_14950 0.64 +1.5 3,306,058 - AO353_14950 0.64 -1.4 3,306,058 - AO353_14950 0.64 +0.9 3,306,058 - AO353_14950 0.64 -0.8 3,306,058 - AO353_14950 0.64 +0.7 3,306,058 - AO353_14950 0.64 +0.5 3,306,058 - AO353_14950 0.64 -1.3 3,306,058 - AO353_14950 0.64 +0.3 3,306,058 - AO353_14950 0.64 +0.6 3,306,058 - AO353_14950 0.64 -0.3 3,306,058 - AO353_14950 0.64 -0.1 3,306,058 - AO353_14950 0.64 -1.7 3,306,058 - AO353_14950 0.64 -2.3 3,306,058 - AO353_14950 0.64 -2.2 3,306,058 - AO353_14950 0.64 +0.3 3,306,058 - AO353_14950 0.64 +0.3 3,306,058 - AO353_14950 0.64 +0.5 3,306,058 - AO353_14950 0.64 -0.1 3,306,058 - AO353_14950 0.64 -1.2 3,306,058 - AO353_14950 0.64 +1.7 3,306,058 - AO353_14950 0.64 +0.5 3,306,058 - AO353_14950 0.64 +0.3 3,306,058 - AO353_14950 0.64 +0.7 3,306,058 - AO353_14950 0.64 -0.0 3,306,058 - AO353_14950 0.64 +0.5 3,306,058 - AO353_14950 0.64 -1.3 3,306,058 - AO353_14950 0.64 +1.7 3,306,058 - AO353_14950 0.64 -1.2 3,306,058 - AO353_14950 0.64 -0.6 3,306,058 - AO353_14950 0.64 +0.8 3,306,058 - AO353_14950 0.64 -0.2 3,306,058 - AO353_14950 0.64 -2.1 3,306,058 - AO353_14950 0.64 +0.5 3,306,058 - AO353_14950 0.64 -1.6 3,306,058 - AO353_14950 0.64 -1.6 3,306,058 - AO353_14950 0.64 -0.9 3,306,058 - AO353_14950 0.64 -0.2 3,306,058 - AO353_14950 0.64 -0.1 3,306,075 - AO353_14950 0.67 -0.1 3,306,075 - AO353_14950 0.67 -1.0 3,306,121 - AO353_14950 0.75 -1.2 3,306,121 - AO353_14950 0.75 -0.6 3,306,121 - AO353_14950 0.75 +0.3 3,306,355 - -0.7 3,306,396 + +0.7 3,306,402 + +0.2 3,306,402 + +0.2 3,306,412 + +0.9 3,306,412 + +0.8 3,306,412 + -0.6 3,306,412 + +1.0 3,306,412 + +0.5 3,306,413 - +0.9 3,306,413 - +0.5 3,306,413 - +0.3 3,306,413 - -0.0 3,306,413 - -1.6
Or see this region's nucleotide sequence